FFCP PHASE1:Hg19::chr8:95487272..95487330,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17228 | |||
|TSSclassifier=strong | |||
|UniProt=F6WBS8,E5RI14,E5RJF7,F5H7U4 | |||
|association_with_transcript=0bp_to_ENST00000297592,ENST00000463267,ENST00000518998,ENST00000543299,ENST00000546218,uc003ygk.2,uc003ygl.1,uc003ygn.1_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_RAD54B_5end | |||
|id=chr8:95487272..95487330,- | |||
|ontology_enrichment_celltype=CL:0000066!7.76e-10!254;CL:0002319!6.28e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.80e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.58e-09,253;CL:0002319,5.45e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.11e-53!235;DOID:14566!9.86e-52!239;DOID:0050687!2.62e-29!143;DOID:0050686!6.73e-25!137;DOID:305!6.83e-24!106;DOID:2531!2.20e-18!51;DOID:0060083!2.20e-18!51;DOID:1240!2.91e-14!39;DOID:8692!1.05e-11!31;DOID:7!1.00e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.52e-11;39!DOID:8692;2.16e-11;31!DOID:2531;2.56e-11;51!DOID:0060083;2.56e-11;51!DOID:305;2.25e-08;106!DOID:0050687;5.31e-08;143!DOID:14566;3.45e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.85e-54,235;DOID:14566,3.05e-52,239;DOID:0050687,3.07e-30,143;DOID:0050686,3.58e-25,137;DOID:305,3.33e-24,106;DOID:2531,6.50e-19,51;DOID:0060083,6.50e-19,51;DOID:1240,1.16e-14,39;DOID:8692,5.03e-12,31;DOID:7,1.19e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,2.7030733015166,2.09340350391728,4.36882744260345,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,6.1560529038394,2.04000691244253,0.313454721478088,16.0292152793392,14.0980657825071,12.4287213198855,24.3758764335965,23.8091709404843,24.9513176764363,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,14.7962353108376,15.3542771086415,4.11040615068786,0.553995408531877,0,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0.365328307529268,1.75996244461323,1.09227722252426,1.77901850772711,0,4.00395987036012,1.72425731986345,0.661044872784862,0.954053754535364,0,0,1.52909291250092,0,0,8.16490662802739,2.16380747125216,0.786021525498329,0.411202997999018,2.17342444007882,1.95553359980154,1.4203434172042,1.94826728407911,1.78256731016278,0.883817722424512,0.221533894583621,0.541607727530031,2.68991771423918,2.47112760363769,4.1109476150919,4.14525026678773,4.63684937176084,2.37258501059297,0.267540828089713,0,5.09892042139048,1.14966148080576,1.37450978193052,1.26509846009751,0.95569624297229,1.95325036156926,0,2.55977702432214,1.4078527226986,0,0.947109008176067,1.64225599384209,0.604820229674197,0.267440195783507,1.15859523106239,0,0.670700859703636,2.17366355134002,7.22878304769133,0,0.724232594804119,3.9764297352555,0.486634870302636,12.2895262313288,4.21285855178871,4.56740885604255,1.83370705696798,2.18577172975525,1.85392221392215,0.649094787309367,0.174129737299267,0,0.476981248610684,0,0,2.98143611050058,2.58070378531837,3.12426451446835,1.13061588384802,1.25849830862972,1.92582629358047,2.92592953151535,1.03366703667732,2.49036383880697,5.69025041699939,2.01414658554573,0,0.976248230192678,5.14728312484216,0.81014194788176,10.8052671223737,5.38870494302808,5.0675166217495,7.66583187329416,0,2.38162267109529,0,0,0.872188104285069,0,4.81195944325403,1.19168262731897,5.73673241497627,3.54668382198357,2.80338800071154,0,1.2333377420858,7.15785381419462,4.17603083416033,7.5192475432191,1.21085942115945,0.576175924479999,1.87457145467037,1.24864030732128,3.4228309292667,0.896692083310806,14.2095743358955,10.0361225508242,12.5001217965001,1.42907919878425,9.70391106762967,0.723280468230358,0,0.494533858557114,0,0,17.5069558512229,13.0123260666843,9.14311581097804,2.63386572528503,1.22595118319608,0.751190294532984,6.35220225696118,14.5305604907978,1.70845911054854,3.39091041855299,14.4043726120513,3.81294358182224,2.57640540045629,0.930584281657949,18.9029492110218,6.72315335612271,12.8741224864498,1.93304787148829,2.90962902273861,10.6502877754984,8.86618464403234,6.27374191548804,2.12586938479627,4.09119180886252,0.860413786167011,15.7346080907178,16.3011615035427,13.3623034299946,8.81118967630649,10.849796587652,18.2488679537915,0,0,0,0,0.721879481669586,12.4222140041836,10.9580048550766,12.5325735539411,9.70586960045067,8.93305720778865,10.9144484791104,8.76403503041069,9.22240886089127,12.3119090222845,2.95262181849859,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,23.3975442689765,5.78045661152634,3.43135620597051,0.768251997860379,1.1240175325762,7.84125984810721,4.72201070308501,1.3032332212413,0,4.3299402607582,5.91245065372892,0.70445216541493,2.02113026865503,0.925971025153221,2.09279567458058,3.95102198979638,7.72637545885385,1.96973604869918,2.57404691653161,2.97262324577457,0.93733833986777,1.51183915378974,3.26082723657489,6.08997954379368,11.3347236020445,1.15014803749563,3.4486426652716,2.3773077183571,0.621984346622316,0.432359860250884,0.6312121671319,14.4140220043224,1.52795370223311,1.17217447210047,1.71072446022705,7.91771693815591,6.00686115687835,5.14487578735041,8.52196241024741,4.3596006883328,15.1810251649367,0.646358578788889,0,5.071816515336,0.531876233169741,2.08014873822732,4.37252536245642,0,3.19706614819319,0.857867961948885,0,2.46972101034231,9.44634934451832,2.13235169245527,5.543663110534,0,0,0.899756920638513,0,0.502257091432126,0,1.67737398844108,0,7.13184525203592,3.90909528002464,2.4657158706046,5.55088986043676,6.50093835162458,1.18218456121156,0.431255149719035,0.513372145118994,9.65559572045361,13.0139853857622,4.63973287666617,4.85797169469611,10.2070200264506,0.749007023947182,0,0,0.36807447515742,1.00034104211935,0.813795071099207,0.831883446123229,0.713715955188647,0.315404830067869,2.22568688486155,0.300946099727719,0,2.0694614258501,5.97803038681893,1.29058417979192,4.43106433787223,0,0.686286847621712,0.620304078368662,0.431428401637234,0.106727557803444,0.909382714338778,0,0.907170879989041,0.248107807818777,3.37616341233737,0.841980283299221,0.384417447767103,3.07024349440022,0.64341568457443,0,5.85996836450091,3.01854933032316,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| |||
|short_description=p1@RAD54B | |||
}} |
Revision as of 22:55, 22 January 2014
Short description: | p1@RAD54B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD54B_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000297592, ENST00000463267, ENST00000518998, ENST00000543299, ENST00000546218, uc003ygk.2, uc003ygl.1, uc003ygn.1_5end |
EntrezGene: | RAD54B |
HGNC: | 17228 |
UniProt: | F6WBS8E5RI14E5RJF7F5H7U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.58e-09 | 253 |
neural cell | 5.45e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.85e-54 | 235 |
disease of cellular proliferation | 3.05e-52 | 239 |
cell type cancer | 3.07e-30 | 143 |
organ system cancer | 3.58e-25 | 137 |
carcinoma | 3.33e-24 | 106 |
hematologic cancer | 6.50e-19 | 51 |
immune system cancer | 6.50e-19 | 51 |
leukemia | 1.16e-14 | 39 |
myeloid leukemia | 5.03e-12 | 31 |
disease of anatomical entity | 1.19e-07 | 39 |