FFCP PHASE1:Hg19::chr8:143867355..143867390,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8581 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13348 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000518884_5end | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_2_at_LY6D_5end | |||
|id=chr8:143867355..143867390,- | |||
|ontology_enrichment_celltype=CL:0002541!4.06e-10!3;CL:0000066!1.18e-09!254;CL:0002251!3.32e-09!21;CL:0000223!4.10e-07!59;CL:0000575!7.15e-07!2;CL:0002076!8.66e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.38e-15;3!CL:0002537;4.97e-09;5!CL:0000349;8.02e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.39e-15,3;CL:0002537,5.28e-09,5;CL:0000349,8.27e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.78e-11;1!UBERON:0009143;3.81e-11;1 | |||
|ontology_enrichment_disease=DOID:305!7.51e-16!106;DOID:0050687!1.21e-12!143;DOID:1749!3.45e-09!14;DOID:162!7.74e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.71e-08,106;DOID:1749,5.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.66e-13!14;UBERON:0000158!9.66e-13!14;UBERON:0003124!7.99e-11!7;UBERON:0000476!4.06e-10!3;UBERON:0000920!4.06e-10!3;UBERON:0004119!2.00e-09!169;UBERON:0000925!2.00e-09!169;UBERON:0006595!2.00e-09!169;UBERON:0000166!3.82e-09!21;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0000161!3.39e-07!35;UBERON:0000077!4.09e-07!130;UBERON:0001004!5.61e-07!72;UBERON:0000478!8.36e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.39e-16;10!UBERON:0000158;1.39e-16;10!UBERON:0003124;9.38e-15;3!UBERON:0000920;9.38e-15;3!UBERON:0000997;1.78e-11;1!UBERON:0004913;1.78e-11;1!UBERON:0005056;1.78e-11;1!UBERON:0003703;1.78e-11;1!UBERON:0004176;1.78e-11;1!UBERON:0001174;1.78e-11;1!UBERON:0004914;1.78e-11;1!UBERON:0000478;1.62e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.31e-18,14;UBERON:0000158,4.31e-18,14;UBERON:0000920,9.39e-15,3;UBERON:0003124,8.38e-14,7;UBERON:0004913,1.45e-11,1;UBERON:0003703,1.45e-11,1;UBERON:0001174,1.45e-11,1;UBERON:0004914,1.45e-11,1;UBERON:0000997,1.97e-11,1;UBERON:0005056,1.97e-11,1;UBERON:0000478,1.63e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,20.1935982966194,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,1.01701460117107,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0.987334088507493,0.108647371922008,0.638002319463839,4.67147726349498,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,2.25382514053069,0,0,0,0,0.0730893170861856,0.0821154570532092,1.93978032976839,0,0,0,0,0,2.15106521008283,0.0801588202515337,0,0.799238438328521,0,0,0,0,0.248505071130865,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.236349546921671,0,0.13480708770837,0,0,0,0,0,0,0,0,1.5476039091159,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,4.9337051562167,0,0,0,0,0,0,4.46838880439127,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,2.95712172434091,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,2.48366636455389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0.852935927603924,0,0.0645889098360061,0,0,0,0,1.30630048738177,0,0.404112318087525,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@LY6D | |||
}} |
Revision as of 00:16, 23 January 2014
Short description: | p2@LY6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LY6D_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | -7bp_to_ENST00000518884_5end |
EntrezGene: | LY6D |
HGNC: | 13348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.39e-15 | 3 |
amnion mesenchymal stem cell | 5.28e-09 | 5 |
extraembryonic cell | 8.27e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.31e-18 | 14 |
membranous layer | 4.31e-18 | 14 |
egg chorion | 9.39e-15 | 3 |
chorion | 8.38e-14 | 7 |
hepatopancreatic ampulla | 1.45e-11 | 1 |
extrahepatic bile duct | 1.45e-11 | 1 |
common bile duct | 1.45e-11 | 1 |
duodenal papilla | 1.45e-11 | 1 |
mammalian vulva | 1.97e-11 | 1 |
external female genitalia | 1.97e-11 | 1 |
extraembryonic structure | 1.63e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.71e-08 | 106 |
squamous cell carcinoma | 5.68e-07 | 14 |