FFCP PHASE1:Hg19::chr9:22238157..22238171,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:22238157..22238171,+ | |||
|id=chr9:22238157..22238171,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.52e-18!254;CL:0000223!5.97e-10!59;CL:0002076!7.36e-09!43 | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.23e-19;4!CL:0002222;3.23e-19;4!CL:0002224;3.23e-19;4!CL:0000064;7.77e-12;3!CL:0000067;7.77e-12;3!CL:0005012;7.77e-12;3!CL:0002304;7.77e-12;3!CL:0000075;1.24e-10;27!CL:0002568;3.74e-10;1!CL:0002379;4.08e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.94e-19,4;CL:0002222,2.94e-19,4;CL:0002224,2.94e-19,4;CL:0000064,4.72e-12,3;CL:0000067,4.72e-12,3;CL:0005012,4.72e-12,3;CL:0002304,4.72e-12,3;CL:0000075,1.04e-10,27;CL:0002568,3.74e-10,1;CL:0002379,4.09e-10,1;CL:0000066,1.56e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;2.15e-12;3!DOID:3620;4.08e-10;1!DOID:3565;4.08e-10;1!DOID:3908;8.82e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,2.15e-12,3;DOID:3620,4.09e-10,1;DOID:3565,4.09e-10,1;DOID:3908,8.83e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.99e-12!11;UBERON:0000488!1.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.25e-26;11!UBERON:0010371;3.78e-20;31!UBERON:0010077;3.23e-19;4!UBERON:0005389;3.23e-19;4!UBERON:0000484;3.23e-19;4!UBERON:0000965;3.23e-19;4!UBERON:0001803;3.23e-19;4!UBERON:0000019;2.96e-15;19!UBERON:0000047;2.96e-15;19!UBERON:0004088;2.96e-15;19!UBERON:0010230;2.96e-15;19!UBERON:0001801;1.43e-14;14!UBERON:0000970;1.80e-14;20!UBERON:0002104;9.21e-14;21!UBERON:0001456;9.21e-14;21!UBERON:0000020;1.58e-12;23!UBERON:0001032;5.49e-12;24!UBERON:0004456;5.49e-12;24!UBERON:0001778;7.77e-12;3!UBERON:0001775;7.77e-12;3!UBERON:0000488;4.22e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,8.00e-27,11;UBERON:0010077,2.94e-19,4;UBERON:0005389,2.94e-19,4;UBERON:0000484,2.94e-19,4;UBERON:0002546,2.94e-19,4;UBERON:0000965,2.94e-19,4;UBERON:0001803,2.94e-19,4;UBERON:0003073,2.94e-19,4;UBERON:0005426,2.94e-19,4;UBERON:0001801,1.06e-14,14;UBERON:0000019,1.41e-14,20;UBERON:0000047,1.41e-14,20;UBERON:0010312,1.41e-14,20;UBERON:0004088,1.41e-14,20;UBERON:0010230,1.41e-14,20;UBERON:0003072,1.41e-14,20;UBERON:0004128,1.41e-14,20;UBERON:0003071,1.41e-14,20;UBERON:0000970,7.32e-14,21;UBERON:0002104,7.32e-14,21;UBERON:0001456,3.27e-13,22;UBERON:0005085,2.27e-12,31;UBERON:0000020,4.50e-12,24;UBERON:0001032,4.50e-12,24;UBERON:0004456,4.50e-12,24;UBERON:0001778,4.72e-12,3;UBERON:0001775,4.72e-12,3;UBERON:0000076,6.52e-10,8;UBERON:0000488,2.91e-09,4;UBERON:0000033,1.98e-08,56;UBERON:0001444,1.46e-07,49;UBERON:0000153,1.63e-07,62;UBERON:0007811,1.63e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,1.77383517970051,1.58102614247627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,1.06748995729705,0.49333509683432,0.311211035399766,0,0,0.302714855289863,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.573609190778008,0,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0.100528972411631,0.277765335475589,0,0,1.44331342025273,0,3.75707821554629,0,0.462985512576611,0,0,0,0,0,0,0,1.17587489739202,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,10.6002806921378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.965123526861645,0,0,0,0,0,0,0.120859449591622,0.802025881213139,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,4.26419039409617,0.650756789328606,0,0.27470839445503,0.330037999682352,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0,0,0.330569830721956,0.192190067365106,2.16941611240793,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,1.37396390102793,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0,0.435296032902013,0,0.171986032471617,0,0.146178634172371,0,0,0,0,2.19267079434801,0,0,0.195551382734803,0,0,0,0,0,0,6.33841111147859,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.26961417541674,2.75596948241297,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,6.01921918160617,0,2.30298236783334,0,0,0,0,0,0.326587360109409,1.19730191562487,0.656740165994712,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.624902039810533,4.85277176133273,0,7.29324041064332,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.07220795687463,0,0,0,0.244736704506468,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0.132864840313363,0,0.655219697692825,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.118193840883968,1.11231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0.357107877211315,0,3.93182696776924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573777643141411,0,0.325613074443898,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr9:22238157..22238171,+ | |||
}} |
Revision as of 01:03, 23 January 2014
Short description: | p@chr9:22238157..22238171, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:22238157..22238171, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.94e-19 | 4 |
vertebrate lens cell | 2.94e-19 | 4 |
lens epithelial cell | 2.94e-19 | 4 |
ciliated cell | 4.72e-12 | 3 |
ciliated epithelial cell | 4.72e-12 | 3 |
multi-ciliated epithelial cell | 4.72e-12 | 3 |
non-pigmented ciliary epithelial cell | 4.72e-12 | 3 |
columnar/cuboidal epithelial cell | 1.04e-10 | 27 |
mesenchymal stem cell of Wharton's jelly | 3.74e-10 | 1 |
meningothelial cell | 4.09e-10 | 1 |
epithelial cell | 1.56e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 8.00e-27 | 11 |
cuboidal epithelium | 2.94e-19 | 4 |
transparent eye structure | 2.94e-19 | 4 |
simple cuboidal epithelium | 2.94e-19 | 4 |
cranial placode | 2.94e-19 | 4 |
lens of camera-type eye | 2.94e-19 | 4 |
epithelium of lens | 2.94e-19 | 4 |
lens placode | 2.94e-19 | 4 |
lens vesicle | 2.94e-19 | 4 |
anterior segment of eyeball | 1.06e-14 | 14 |
camera-type eye | 1.41e-14 | 20 |
simple eye | 1.41e-14 | 20 |
immature eye | 1.41e-14 | 20 |
ocular region | 1.41e-14 | 20 |
eyeball of camera-type eye | 1.41e-14 | 20 |
optic cup | 1.41e-14 | 20 |
optic vesicle | 1.41e-14 | 20 |
eye primordium | 1.41e-14 | 20 |
eye | 7.32e-14 | 21 |
visual system | 7.32e-14 | 21 |
face | 3.27e-13 | 22 |
ectodermal placode | 2.27e-12 | 31 |
sense organ | 4.50e-12 | 24 |
sensory system | 4.50e-12 | 24 |
entire sense organ system | 4.50e-12 | 24 |
ciliary epithelium | 4.72e-12 | 3 |
ciliary body | 4.72e-12 | 3 |
external ectoderm | 6.52e-10 | 8 |
atypical epithelium | 2.91e-09 | 4 |
head | 1.98e-08 | 56 |
subdivision of head | 1.46e-07 | 49 |
anterior region of body | 1.63e-07 | 62 |
craniocervical region | 1.63e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.15e-12 | 3 |
central nervous system cancer | 4.09e-10 | 1 |
meningioma | 4.09e-10 | 1 |
non-small cell lung carcinoma | 8.83e-08 | 5 |