FFCP PHASE1:Hg19::chrX:21849506..21849512,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chrX:21849506..21849512,- | |||
|id=chrX:21849506..21849512,- | |||
|ontology_enrichment_celltype=CL:0000181!3.89e-41!12;CL:0000417!3.89e-41!12;CL:0000668!3.89e-41!12;CL:0000414!3.89e-41!12;CL:0000412!3.89e-41!12;CL:0000182!3.89e-41!12;CL:0000223!3.20e-21!59;CL:0002563!4.23e-21!4;CL:0002253!1.82e-11!2;CL:0002231!5.54e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.35e-66;4!CL:0002253;3.61e-34;2!CL:0002251;2.58e-14;20!CL:0002076;2.50e-07;42!CL:0000182;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.35e-66,4;CL:0002253,3.61e-34,2;CL:0002251,2.58e-14,20;CL:0000223,2.67e-11,58;CL:0002076,2.10e-07,42;CL:0000182,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.96e-10;31!UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:7!7.85e-13!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.14e-26!19;UBERON:0006925!4.14e-26!19;UBERON:0008836!4.14e-26!19;UBERON:0003929!3.31e-23!54;UBERON:0008835!1.38e-22!22;UBERON:0003894!1.38e-22!22;UBERON:0009854!1.28e-21!23;UBERON:0001242!4.23e-21!4;UBERON:0001262!4.23e-21!4;UBERON:0004786!4.23e-21!4;UBERON:0004808!4.23e-21!4;UBERON:0001277!4.23e-21!4;UBERON:0007190!9.43e-21!1;UBERON:0007499!6.57e-20!25;UBERON:0009497!6.57e-20!25;UBERON:0000015!6.57e-20!25;UBERON:0002423!6.57e-20!25;UBERON:0006235!6.57e-20!25;UBERON:0004161!6.57e-20!25;UBERON:0005057!3.75e-19!26;UBERON:0009856!3.75e-19!26;UBERON:0003350!4.28e-17!5;UBERON:0002365!4.25e-16!31;UBERON:0002330!4.25e-16!31;UBERON:0005911!3.41e-15!82;UBERON:0002368!2.80e-14!35;UBERON:0002530!4.90e-12!59;UBERON:0000949!3.87e-11!45;UBERON:0000485!6.20e-10!9;UBERON:0004921!1.91e-09!129;UBERON:0004185!1.91e-09!129;UBERON:0005172!3.93e-09!55;UBERON:0005173!3.93e-09!55;UBERON:0000490!7.14e-09!138;UBERON:0002417!3.06e-08!61;UBERON:0000916!3.06e-08!61;UBERON:0001007!8.53e-08!155;UBERON:0001555!8.53e-08!155;UBERON:0007026!8.53e-08!155;UBERON:0000344!1.13e-07!12;UBERON:0000060!1.13e-07!12;UBERON:0000077!3.06e-07!130;UBERON:0004119!4.11e-07!169;UBERON:0000925!4.11e-07!169;UBERON:0006595!4.11e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.35e-66;4!UBERON:0001262;3.35e-66;4!UBERON:0004786;3.35e-66;4!UBERON:0004808;3.35e-66;4!UBERON:0001277;3.35e-66;4!UBERON:0000485;1.80e-38;7!UBERON:0003929;1.80e-38;7!UBERON:0003350;7.68e-34;8!UBERON:0001052;7.35e-18;4!UBERON:0000160;9.05e-16;17!UBERON:0004907;1.40e-14;5!UBERON:0000344;2.58e-14;20!UBERON:0005409;1.33e-12;22!UBERON:0004921;2.79e-09;33!UBERON:0001155;1.04e-08;9!UBERON:0005911;1.26e-08;36!UBERON:0000490;1.26e-08;33!UBERON:0000059;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.35e-66,4;UBERON:0001262,3.35e-66,4;UBERON:0004786,3.35e-66,4;UBERON:0004808,3.35e-66,4;UBERON:0001277,3.35e-66,4;UBERON:0003350,7.68e-34,8;UBERON:0000485,3.09e-30,9;UBERON:0001052,7.35e-18,4;UBERON:0000160,9.05e-16,17;UBERON:0004907,1.40e-14,5;UBERON:0000344,2.58e-14,20;UBERON:0003929,4.68e-12,54;UBERON:0005409,2.77e-11,25;UBERON:0001155,1.04e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0000059,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.236349546921671,0.247247575143499,0.471824806979294,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:21849506..21849512,- | |||
}} |
Revision as of 05:04, 23 January 2014
Short description: | p@chrX:21849506..21849512, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:21849506..21849512, - |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.35e-66 | 4 |
epithelial cell of large intestine | 3.61e-34 | 2 |
epithelial cell of alimentary canal | 2.58e-14 | 20 |
endodermal cell | 2.67e-11 | 58 |
endo-epithelial cell | 2.10e-07 | 42 |
hepatocyte | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.35e-66 | 4 |
wall of intestine | 3.35e-66 | 4 |
gastrointestinal system mucosa | 3.35e-66 | 4 |
gastrointestinal system epithelium | 3.35e-66 | 4 |
intestinal epithelium | 3.35e-66 | 4 |
epithelium of mucosa | 7.68e-34 | 8 |
simple columnar epithelium | 3.09e-30 | 9 |
rectum | 7.35e-18 | 4 |
intestine | 9.05e-16 | 17 |
lower digestive tract | 1.40e-14 | 5 |
mucosa | 2.58e-14 | 20 |
gut epithelium | 4.68e-12 | 54 |
gastrointestinal system | 2.77e-11 | 25 |
colon | 1.04e-08 | 9 |
endo-epithelium | 2.70e-08 | 82 |
large intestine | 2.32e-07 | 11 |