FFCP PHASE1:Hg19::chrX:49012307..49012347,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:49012307..49012347,+ | |||
|id=chrX:49012307..49012347,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.48e-08!682;CL:0000548!1.31e-07!679;CL:0000004!1.31e-07!679;CL:0000255!1.31e-07!679;CL:1000449!6.72e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.75e-08;36!CL:0002188;9.32e-08;5!CL:1000746;1.33e-07;7!CL:1000612;1.33e-07;7!CL:1000497;7.15e-07;17!CL:0002518;7.15e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.17e-10,36;CL:0002078,2.23e-09,45;CL:0002188,2.21e-08,5;CL:1000746,4.75e-08,7;CL:1000612,4.75e-08,7;CL:1000497,4.24e-07,17;CL:0002518,4.24e-07,17;CL:0002681,7.68e-07,12;CL:0002584,7.68e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!6.72e-07!16;UBERON:0001285!6.72e-07!16;UBERON:0007684!6.72e-07!16;UBERON:0003220!6.72e-07!16;UBERON:0004208!6.72e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.33e-07;7!UBERON:0001229;1.33e-07;7!UBERON:0000353;1.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,4.75e-08,7;UBERON:0000074,4.75e-08,7;UBERON:0001229,4.75e-08,7;UBERON:0001230,4.75e-08,7;UBERON:0003220,4.75e-08,7;UBERON:0005749,4.75e-08,7;UBERON:0004199,4.75e-08,7;UBERON:0004209,4.75e-08,7;UBERON:0004198,4.75e-08,7;UBERON:0000353,8.00e-08,15;UBERON:0002049,1.06e-07,78;UBERON:0007798,1.06e-07,78;UBERON:0005103,6.91e-07,8;UBERON:0000083,6.91e-07,8;UBERON:0009201,6.91e-07,8;UBERON:0006553,6.91e-07,8;UBERON:0003074,6.91e-07,8;UBERON:0003060,6.91e-07,8;UBERON:0001225,7.68e-07,12;UBERON:0008987,7.68e-07,12 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0,1.74467704820074,0,0,0.522371256399677,0.982935746006035,4.88460817580699,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0.730310090387373,1.46379839637152,2.09305798730539,2.44800829493104,0.626909442956176,0.572471974262113,1.64249310087461,0.502170558379211,0.152826811495903,0.246301768349837,0.0787107813136792,0.393364276848904,0.767658796194425,0.309632246632152,1.83884244895785,1.204823675113,0.739508020333575,0.309868802321207,0,2.34880351467878,0,0,1.30206522429511,0.223915474239924,0,0,1.30858414901608,1.51150377475524,0.727752183563449,1.62700325833979,1.23350366406548,1.23882548358041,0.863077176966451,0,0.709446689665756,0.344745680736619,1.29096936716765,2.70852973188684,0.564727018627814,1.91034305040492,1.34834090667051,0.306083892370903,0,0.639337125799041,0.659702600373432,0.199463657621632,1.27867425159808,0.580418477257168,0,0.622822248995575,1.25624332628372,0.521482918420201,0.868755378820466,0,0.368277635987565,0.632924774881769,0.633765858935825,0.850417199860174,0.838634582033504,1.23561494261145,0.750884464207532,0.48217676009124,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0.889509253863555,0.426730222566507,0,1.72425731986345,0,0,1.70763890732835,0,0,3.96513985737078,1.12101712596307,0,0,0.393010762749165,0.822405995998037,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,1.14966148080576,0,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.80642697289893,1.06976078313403,0.579297615531196,0,0,0,0,0,0.289693037921647,0.795285947051099,0.973269740605272,1.22895262313288,2.21729397462564,0.966182642624386,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0.476981248610684,0,0,0.79504962946682,0.860234595106124,2.08284300964557,0.56530794192401,1.67799774483962,1.6507082516404,0.626984899610432,0.258416759169329,0,0.33472061276467,2.01414658554573,0,1.22031028774085,0.367663080345869,2.43042584364528,0.803697554556718,0.673588117878509,1.35133776579987,1.53316637465883,1.89853131913626,1.28241220751285,2.63560834872127,3.87780264148325,0,0,0.25326102332916,0.529636723252875,0.286836620748814,0,2.24271040056923,3.20246987189115,1.48000529050296,0.622422070799533,0.67355336034844,0.653847612453835,0.454072282934794,2.30470369792,0.234321431833797,0.936480230490962,1.1409436430889,0.298897361103602,0.587172493218824,1.29498355494505,0.842704840213491,0.408308342509787,0.737005903870608,0.309977343527296,0,0.494533858557114,0,1.43723628363248,0.505008341862199,1.62654075833553,0,0.438977620880838,1.22595118319608,0.300476117813194,0.226864366320042,0.717558542755448,0.640672166455702,0.635795703478686,0,0.515262646192195,0.772921620136887,0.930584281657949,0.168776332241266,0.584622030967192,0.252433774244115,0.552299391853796,0.484938170456436,0.355009592516614,0.604512589365842,0.508681776931463,0.57978255948989,0.818238361772504,0,0.365921118388786,0.265059536642971,0.464775771478074,0.621966330092223,0.504641701751257,0.36497735907583,0,3.21620469096443,0,0.928735856063958,0.721879481669586,1.0647612003586,0.842923450390509,1.68707720918437,1.21323370005633,0.653638332277218,1.66089433377768,0.269662616320329,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,0.4115740113314,0,0,0,0,0,0.245976877086227,0.514703430895577,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,3.11980435583874,1.44331342025273,1.04337364477569,0.234817388471643,1.01056513432752,0.462985512576611,1.14152491340759,1.58040879591855,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,0.179117045405697,0,1.15014803749563,1.47798971368783,0.880484340132261,1.03664057770386,0.576479813667846,1.64115163454294,0.190493682876507,0.381988425558278,1.17217447210047,0,0.719792448923265,0.600686115687835,0,0.224262168690721,0.87192013766656,0.5867062865676,0.129271715757778,0,0,0.26593811658487,2.08014873822732,1.28603687131071,4.25547396069835,2.93064396917709,0.285955987316295,1.62786481617433,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0.394061520403854,1.2937654491571,0.641715181398742,0.508189248444927,2.60279707715243,1.54657762555539,1.50764638800914,3.18969375826582,0.749007023947182,0,1.65766205374414,0.49076596687656,1.00034104211935,0.813795071099207,0.207970861530807,0.178428988797162,0.630809660135739,0.585707074963566,0.300946099727719,2.27407504055985,0,0.664225598535437,0.737476674166813,0.260650843404249,0.195801157462741,2.40200396667599,0.206768026122887,0.647142602455851,0.74709290462411,0.303127571446259,1.66435439510497,1.81434175997808,0.248107807818777,0.61384789315225,0.280660094433074,0,1.02341449813341,0.482561763430822,1.48418066444991,0.154209693802656,0,0.164254312027618,0.519254429183621,0.5810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| |||
|short_description=p@chrX:49012307..49012347,+ | |||
}} |
Revision as of 05:39, 23 January 2014
Short description: | p@chrX:49012307..49012347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:49012307..49012347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.17e-10 | 36 |
meso-epithelial cell | 2.23e-09 | 45 |
glomerular endothelial cell | 2.21e-08 | 5 |
glomerular cell | 4.75e-08 | 7 |
kidney corpuscule cell | 4.75e-08 | 7 |
kidney cell | 4.24e-07 | 17 |
kidney epithelial cell | 4.24e-07 | 17 |
kidney cortical cell | 7.68e-07 | 12 |
renal cortical epithelial cell | 7.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 4.75e-08 | 7 |
renal glomerulus | 4.75e-08 | 7 |
renal corpuscle | 4.75e-08 | 7 |
glomerular capsule | 4.75e-08 | 7 |
metanephric mesenchyme | 4.75e-08 | 7 |
glomerular tuft | 4.75e-08 | 7 |
S-shaped body | 4.75e-08 | 7 |
renal vesicle | 4.75e-08 | 7 |
comma-shaped body | 4.75e-08 | 7 |
parenchyma | 8.00e-08 | 15 |
vasculature | 1.06e-07 | 78 |
vascular system | 1.06e-07 | 78 |
mesonephric epithelium | 6.91e-07 | 8 |
mesonephric tubule | 6.91e-07 | 8 |
nephric duct | 6.91e-07 | 8 |
renal duct | 6.91e-07 | 8 |
mesonephric duct | 6.91e-07 | 8 |
pronephric duct | 6.91e-07 | 8 |
cortex of kidney | 7.68e-07 | 12 |
renal parenchyma | 7.68e-07 | 12 |