FFCP PHASE1:Hg19::chr19:18288780..18288808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10437 | |EntrezGene=entrezgene:10437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=5398 | |HGNC=HGNC:5398 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q96P99 | |UniProt=uniprot:Q96P99 | ||
|association_with_transcript=118bp_to_AF401212_5end | |association_with_transcript=118bp_to_AF401212_5end | ||
|cluster_id=chr19:18288780..18288808,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_4_at_IFI30_5end | |description=CAGE_peak_4_at_IFI30_5end |
Revision as of 05:03, 26 July 2015
Short description: | p4@IFI30 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFI30_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 118bp_to_AF401212_5end |
EntrezGene: | 10437 |
HGNC: | 5398 |
UniProt: | Q96P99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@IFI30 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.55e-86 | 48 |
phagocyte | 2.55e-86 | 48 |
monopoietic cell | 5.34e-86 | 59 |
monocyte | 5.34e-86 | 59 |
monoblast | 5.34e-86 | 59 |
promonocyte | 5.34e-86 | 59 |
macrophage dendritic cell progenitor | 1.10e-82 | 61 |
myeloid lineage restricted progenitor cell | 2.86e-75 | 66 |
classical monocyte | 6.04e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.04e-74 | 42 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.45e-77 | 98 |
blood island | 3.45e-77 | 98 |
hemolymphoid system | 3.63e-73 | 108 |
bone marrow | 2.74e-71 | 76 |
bone element | 6.88e-65 | 82 |
immune system | 6.07e-60 | 93 |
skeletal element | 1.12e-57 | 90 |
skeletal system | 2.70e-52 | 100 |
lateral plate mesoderm | 2.73e-41 | 203 |
musculoskeletal system | 2.15e-29 | 167 |
Showing 1 to 10 of 26 entries