FFCP PHASE1:Hg19::chr20:52750070..52750079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:52750070..52750079,- | |||
|coexpression_cluster_id=C258 | |coexpression_cluster_id=C258 | ||
|description=CAGE_peak_at_chr20:52750070..52750079,- | |description=CAGE_peak_at_chr20:52750070..52750079,- | ||
Latest revision as of 15:34, 28 July 2015
| Short description: | p@chr20:52750070..52750079, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr20:52750070..52750079, - |
| Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr20:52750070..52750079- |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 5.27e-53 | 12 |
| light melanocyte | 1.83e-14 | 3 |
| endodermal cell | 1.28e-11 | 58 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 7.67e-34 | 19 |
| digestive gland | 7.67e-34 | 19 |
| liver bud | 7.67e-34 | 19 |
| hepatic diverticulum | 2.36e-29 | 22 |
| liver primordium | 2.36e-29 | 22 |
| digestive tract diverticulum | 4.07e-28 | 23 |
| epithelial sac | 6.14e-26 | 25 |
| epithelium of foregut-midgut junction | 6.14e-26 | 25 |
| anatomical boundary | 6.14e-26 | 25 |
| hepatobiliary system | 6.14e-26 | 25 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| disease of anatomical entity | 6.34e-17 | 39 |
Showing 1 to 1 of 1 entries
