FFCP PHASE1:Hg19::chr3:98633389..98633415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98633389..98633415,+ | |||
|description=CAGE_peak_at_chr3:98633389..98633415,+ | |description=CAGE_peak_at_chr3:98633389..98633415,+ | ||
|id=chr3:98633389..98633415,+ | |id=chr3:98633389..98633415,+ | ||
Latest revision as of 00:09, 30 July 2015
| Short description: | p@chr3:98633389..98633415, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:98633389..98633415, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr3:98633389..98633415+ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of gall bladder | 1.33e-15 | 2 |
| crystallin accumulating cell | 1.96e-08 | 4 |
| vertebrate lens cell | 1.96e-08 | 4 |
| lens epithelial cell | 1.96e-08 | 4 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| biliary system | 3.21e-50 | 9 |
| biliary tree | 3.21e-50 | 9 |
| biliary bud | 3.21e-50 | 9 |
| bile duct | 1.53e-42 | 6 |
| digestive system duct | 1.53e-42 | 6 |
| hepatopancreatic ampulla | 1.78e-29 | 1 |
| extrahepatic bile duct | 1.78e-29 | 1 |
| common bile duct | 1.78e-29 | 1 |
| duodenal papilla | 1.78e-29 | 1 |
| epithelium of foregut-midgut junction | 1.57e-18 | 25 |
Showing 1 to 10 of 35 entries
| Ontology term | p-value | n |
|---|---|---|
| cystadenocarcinoma | 7.48e-30 | 1 |
| mucinous cystadenocarcinoma | 7.48e-30 | 1 |
| tubular adenocarcinoma | 1.78e-15 | 2 |
| carcinoma | 7.66e-10 | 106 |
| cell type cancer | 2.48e-07 | 143 |
Showing 1 to 5 of 5 entries
