FFCP PHASE1:Mm9::chr14:104243404..104243415,-: Difference between revisions
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{{FFCP|EntrezGene=13618|HGNC=|MCL_coexpression_id=114|UniProt=P48302,F8WJF4|association_with_transcript=-14bp_to_ENSMUST00000022718,ENSMUST00000088530,NM_001136061,uc007uwx.2_5end|description=CAGE_peak_12_at_Ednrb_5end|id=chr14:104243404..104243415,-|ontology_enrichment_celltype=CL:0000540!1.04e-14!33;CL:0000047!1.04e-14!33;CL:0000031!1.04e-14!33;CL:0000404!1.04e-14!33;CL:0000221!1.33e-12!44;CL:0000133!1.33e-12!44;CL:0002319!5.77e-12!43;CL:0000393!5.51e-10!39;CL:0000211!5.51e-10!39;CL:0000107!3.48e-08!9;CL:0000055!5.44e-08!50;CL:0000117!7.83e-08!23;CL:0000337!7.83e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-24,33;CL:0000047,2.05e-24,33;CL:0000031,2.05e-24,33;CL:0000404,2.05e-24,33;CL:0000221,2.01e-22,44;CL:0000133,2.01e-22,44;CL:0002319,6.11e-21,43;CL:0000393,1.07e-19,39;CL:0000211,1.07e-19,39;CL:0000107,1.14e-18,9;CL:0002321,1.50e-11,70;CL:0000117,2.86e-09,23;CL:0000337,2.86e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.80e-13!102;UBERON:0000924!5.80e-13!102;UBERON:0006601!5.80e-13!102;UBERON:0000073!2.49e-11!75;UBERON:0001016!2.49e-11!75;UBERON:0001017!1.10e-10!73;UBERON:0005743!1.10e-10!73;UBERON:0000010!1.20e-08!11;UBERON:0002346!1.79e-08!71;UBERON:0003075!1.79e-08!71;UBERON:0007284!1.79e-08!71;UBERON:0002410!3.48e-08!9;UBERON:0000468!1.31e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.14e-18,9;UBERON:0000010,4.54e-18,11;UBERON:0002240,3.09e-10,6;UBERON:0005174,3.09e-10,6;UBERON:0001137,3.09e-10,6;UBERON:0001016,3.61e-10,75;UBERON:0004121,4.97e-10,95;UBERON:0000924,4.97e-10,95;UBERON:0006601,4.97e-10,95;UBERON:0001017,1.37e-09,73;UBERON:0001948,5.23e-09,5;UBERON:0002315,5.23e-09,5;UBERON:0010313,2.32e-07,3;UBERON:0002342,2.32e-07,3;UBERON:0002005,2.32e-07,3;UBERON:0005428,2.32e-07,3;UBERON:0005062,2.32e-07,3;UBERON:0000011,2.79e-07,3;UBERON:0000013,3.35e-07,3|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,2.64495489636016,1.90149421051854,0,0,0,0,0,0,1.53687322128622,0.518448061542388,0.540023753326763,0.210324961351382,1.14260393761521,1.32521124570968,0.857435594504678,2.97120960156533,0,0,0.127687338085188,0.614426133024974,1.84640802822271,2.28719109006024,2.6045668527838,0.558365998002762,0.56276261003168,0.30559649555362,2.65165726926301,2.27794689278565,2.42319279572891,0.37863096666592,1.66257432234928,0.289864488701678,0,0,0,0,0,0,0,0,0,5.35204995151386,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,1.04091196059682,0.304465478312141,0,0.452167921657868,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,0,0.879580464790051,0.521472960576829,0,0.41557608911912,0.648965052271031,0.611036183101898,0.124406970610093,0,0,0.260240885925407,0.229902104433473,1.80062129805349,1.20563854268572,1.08858398642125,0.768682321709099,0.843315521037559,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,1.40715635988658,0.180062061461015,0.710234206755631,0.196764231747404,0.154267112887378,0.232533944750408,0,1.05088808130453,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0.823236899034275,0,0,1.2797295032114,3.71578674976702,2.70621668776396,3.02525286935014,0.889512175379481,0.951128130562796,0,0.658795818896044,0.502670417600539,0.994782360205754,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.561086559122548,0.505892296994058,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0.947457058852424,1.14075483509418,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,1.36593553500459,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,0.642202359951168,0.35163505977661,0,0,8.20321370482267,8.58965237452605,13.3562506594335,6.93009514062401,11.3627323782021,8.20921939287614,7.2865926301481,9.35218745316198,5.92931666919785,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,0.822745103010605,0.608929898229199,0,1.0591603543191,0.220528398054962,0,0,0.180938774784468,0.358117032009409,0.328281799490123,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,3.32152793260192,1.01659733563424,1.18805874903981,2.09088296014469,1.09181281873089,0.539457385539283,0.661227645802687,0,0,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0.117357238645754,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13618 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P48302,uniprot:F8WJF4 | |||
|association_with_transcript=-14bp_to_ENSMUST00000022718,ENSMUST00000088530,NM_001136061,uc007uwx.2_5end | |||
|cluster_id=chr14:104243404..104243415,- | |||
|description=CAGE_peak_12_at_Ednrb_5end | |||
|id=chr14:104243404..104243415,- | |||
|ontology_enrichment_celltype=CL:0000540!1.04e-14!33;CL:0000047!1.04e-14!33;CL:0000031!1.04e-14!33;CL:0000404!1.04e-14!33;CL:0000221!1.33e-12!44;CL:0000133!1.33e-12!44;CL:0002319!5.77e-12!43;CL:0000393!5.51e-10!39;CL:0000211!5.51e-10!39;CL:0000107!3.48e-08!9;CL:0000055!5.44e-08!50;CL:0000117!7.83e-08!23;CL:0000337!7.83e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-24,33;CL:0000047,2.05e-24,33;CL:0000031,2.05e-24,33;CL:0000404,2.05e-24,33;CL:0000221,2.01e-22,44;CL:0000133,2.01e-22,44;CL:0002319,6.11e-21,43;CL:0000393,1.07e-19,39;CL:0000211,1.07e-19,39;CL:0000107,1.14e-18,9;CL:0002321,1.50e-11,70;CL:0000117,2.86e-09,23;CL:0000337,2.86e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.80e-13!102;UBERON:0000924!5.80e-13!102;UBERON:0006601!5.80e-13!102;UBERON:0000073!2.49e-11!75;UBERON:0001016!2.49e-11!75;UBERON:0001017!1.10e-10!73;UBERON:0005743!1.10e-10!73;UBERON:0000010!1.20e-08!11;UBERON:0002346!1.79e-08!71;UBERON:0003075!1.79e-08!71;UBERON:0007284!1.79e-08!71;UBERON:0002410!3.48e-08!9;UBERON:0000468!1.31e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.14e-18,9;UBERON:0000010,4.54e-18,11;UBERON:0002240,3.09e-10,6;UBERON:0005174,3.09e-10,6;UBERON:0001137,3.09e-10,6;UBERON:0001016,3.61e-10,75;UBERON:0004121,4.97e-10,95;UBERON:0000924,4.97e-10,95;UBERON:0006601,4.97e-10,95;UBERON:0001017,1.37e-09,73;UBERON:0001948,5.23e-09,5;UBERON:0002315,5.23e-09,5;UBERON:0010313,2.32e-07,3;UBERON:0002342,2.32e-07,3;UBERON:0002005,2.32e-07,3;UBERON:0005428,2.32e-07,3;UBERON:0005062,2.32e-07,3;UBERON:0000011,2.79e-07,3;UBERON:0000013,3.35e-07,3 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,2.64495489636016,1.90149421051854,0,0,0,0,0,0,1.53687322128622,0.518448061542388,0.540023753326763,0.210324961351382,1.14260393761521,1.32521124570968,0.857435594504678,2.97120960156533,0,0,0.127687338085188,0.614426133024974,1.84640802822271,2.28719109006024,2.6045668527838,0.558365998002762,0.56276261003168,0.30559649555362,2.65165726926301,2.27794689278565,2.42319279572891,0.37863096666592,1.66257432234928,0.289864488701678,0,0,0,0,0,0,0,0,0,5.35204995151386,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,1.04091196059682,0.304465478312141,0,0.452167921657868,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0.599162557619291,0,0.879580464790051,0.521472960576829,0,0.41557608911912,0.648965052271031,0.611036183101898,0.124406970610093,0,0,0.260240885925407,0.229902104433473,1.80062129805349,1.20563854268572,1.08858398642125,0.768682321709099,0.843315521037559,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,1.40715635988658,0.180062061461015,0.710234206755631,0.196764231747404,0.154267112887378,0.232533944750408,0,1.05088808130453,0.16455984991348,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0.823236899034275,0,0,1.2797295032114,3.71578674976702,2.70621668776396,3.02525286935014,0.889512175379481,0.951128130562796,0,0.658795818896044,0.502670417600539,0.994782360205754,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.561086559122548,0.505892296994058,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0.947457058852424,1.14075483509418,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,1.36593553500459,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,0.642202359951168,0.35163505977661,0,0,8.20321370482267,8.58965237452605,13.3562506594335,6.93009514062401,11.3627323782021,8.20921939287614,7.2865926301481,9.35218745316198,5.92931666919785,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,0.822745103010605,0.608929898229199,0,1.0591603543191,0.220528398054962,0,0,0.180938774784468,0.358117032009409,0.328281799490123,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,3.32152793260192,1.01659733563424,1.18805874903981,2.09088296014469,1.09181281873089,0.539457385539283,0.661227645802687,0,0,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.93408612825759,0.798049746802062,1.02440163452481,0.486213434136588,0.628839487883947,0.367687016900028,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.565879024158229,0.37456602987953,0.512201219238954,0.402048282689293,1.42888107384922,0.463537303779422,0.578727661391115,0.824171801606613,1.03039244094078,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0.593175090620871,0.492522411877817,1.63692417267876,0.154936841185966,0.385813221962283,1.49886346762768,0.233931608445408,1.50409737833809,0,0.441182838239031,0.463735671240843 | |||
|short_description=p12@Ednrb | |||
}} |
Revision as of 22:38, 3 August 2015
Short description: | p12@Ednrb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Ednrb_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | -14bp_to_ENSMUST00000022718, ENSMUST00000088530, NM_001136061, uc007uwx.2_5end |
EntrezGene: | 13618 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.05e-24 | 33 |
neuronal stem cell | 2.05e-24 | 33 |
neuroblast | 2.05e-24 | 33 |
electrically signaling cell | 2.05e-24 | 33 |
ectodermal cell | 2.01e-22 | 44 |
neurectodermal cell | 2.01e-22 | 44 |
neural cell | 6.11e-21 | 43 |
electrically responsive cell | 1.07e-19 | 39 |
electrically active cell | 1.07e-19 | 39 |
autonomic neuron | 1.14e-18 | 9 |
embryonic cell | 1.50e-11 | 70 |
CNS neuron (sensu Vertebrata) | 2.86e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.14e-18 | 9 |
peripheral nervous system | 4.54e-18 | 11 |
spinal cord | 3.09e-10 | 6 |
dorsal region element | 3.09e-10 | 6 |
dorsum | 3.09e-10 | 6 |
nervous system | 3.61e-10 | 75 |
ectoderm-derived structure | 4.97e-10 | 95 |
ectoderm | 4.97e-10 | 95 |
presumptive ectoderm | 4.97e-10 | 95 |
central nervous system | 1.37e-09 | 73 |
regional part of spinal cord | 5.23e-09 | 5 |
gray matter of spinal cord | 5.23e-09 | 5 |
neural crest-derived structure | 2.32e-07 | 3 |
neural crest | 2.32e-07 | 3 |
enteric nervous system | 2.32e-07 | 3 |
vagal neural crest | 2.32e-07 | 3 |
neural fold | 2.32e-07 | 3 |
parasympathetic nervous system | 2.79e-07 | 3 |
sympathetic nervous system | 3.35e-07 | 3 |