FFCP PHASE1:Mm9::chr14:104243425..104243438,-: Difference between revisions
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{{FFCP|EntrezGene=13618|HGNC=|MCL_coexpression_id=114|UniProt=P48302,F8WJF4|association_with_transcript=-35bp_to_ENSMUST00000022718,ENSMUST00000088530,NM_001136061,uc007uwx.2_5end|description=CAGE_peak_6_at_Ednrb_5end|id=chr14:104243425..104243438,-|ontology_enrichment_celltype=CL:0000540!6.97e-16!33;CL:0000047!6.97e-16!33;CL:0000031!6.97e-16!33;CL:0000404!6.97e-16!33;CL:0000221!2.92e-14!44;CL:0000133!2.92e-14!44;CL:0002319!1.32e-13!43;CL:0000393!1.12e-10!39;CL:0000211!1.12e-10!39;CL:0000055!4.89e-09!50;CL:0000117!6.37e-09!23;CL:0000337!6.37e-09!23;CL:0000107!5.20e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.55e-20,33;CL:0000047,1.55e-20,33;CL:0000031,1.55e-20,33;CL:0000404,1.55e-20,33;CL:0000221,8.16e-20,44;CL:0000133,8.16e-20,44;CL:0002319,9.08e-19,43;CL:0000393,6.40e-16,39;CL:0000211,6.40e-16,39;CL:0000107,2.40e-12,9;CL:0000117,8.67e-10,23;CL:0000337,8.67e-10,23;CL:0002321,1.22e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.57e-17!102;UBERON:0000924!1.57e-17!102;UBERON:0006601!1.57e-17!102;UBERON:0000073!7.96e-16!75;UBERON:0001016!7.96e-16!75;UBERON:0001017!7.13e-15!73;UBERON:0005743!7.13e-15!73;UBERON:0002346!3.78e-11!71;UBERON:0003075!3.78e-11!71;UBERON:0007284!3.78e-11!71;UBERON:0000010!7.21e-09!11;UBERON:0000468!3.55e-08!333;UBERON:0002410!5.20e-08!9;UBERON:0000033!1.12e-07!63;UBERON:0001049!5.03e-07!52;UBERON:0005068!5.03e-07!52;UBERON:0006241!5.03e-07!52;UBERON:0007135!5.03e-07!52;UBERON:0003056!8.39e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.16e-17,75;UBERON:0004121,1.19e-16,95;UBERON:0000924,1.19e-16,95;UBERON:0006601,1.19e-16,95;UBERON:0001017,2.04e-15,73;UBERON:0000010,8.90e-14,11;UBERON:0002410,2.40e-12,9;UBERON:0010371,7.39e-09,73;UBERON:0002346,1.19e-08,64;UBERON:0003075,1.19e-08,64;UBERON:0007284,1.19e-08,64;UBERON:0010314,9.09e-08,92|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,4.43681982454325,0,0,0,0,0,1.19840044207362,1.53687322128622,0.518448061542388,0.405017814995072,0.630974884054146,1.14260393761521,1.76694832761291,2.20483438586917,2.20444583341944,2.75765635983006,1.10115880999389,1.0214987046815,0.46081959976873,2.90149833006426,3.11057988248193,1.04182674111352,1.3959149950069,0.56276261003168,1.06958773443767,0.883885756421003,3.41692033917847,2.42319279572891,1.06016670666458,5.66786700800891,0,0,0,0,0,0,0.140444420131752,0,0,0,12.5350643601246,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,1.04091196059682,0.913396434936424,0.461230994512117,0.301445281105245,0.823120949949934,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,1.49790639404823,1.83000241127451,1.38219787324151,0.521472960576829,1.02286182932132,1.45451631191692,2.10913641988085,0.712875546952214,0.248813941220186,0,0.631325567659422,0.260240885925407,0.689706313300419,1.0803727788321,2.26057226753573,1.36072998302656,0.896796041993948,1.40552586839593,1.81092359517311,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,1.03562886267751,1.40715635988658,1.44049649168812,1.65721314909647,0.983821158737019,1.3884040159864,0.232533944750408,0.804820204198858,0.583826711835847,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.68231958851302,0.92614151141356,0,0.264450566663544,3.19932375802851,3.71578674976702,3.35055399437443,1.81515172161008,2.00140239460383,1.71203063501303,0,1.31759163779209,1.50801125280162,0.596869416123452,0.974820435595601,0,0,0.398282546508734,0,0.114248512609729,0,0.814605311381257,0.581857461502877,0.911765658574141,0.252946148497029,0,0,0.246794327843601,0,0.166845105716094,0.982794975566015,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,1.32643988239339,1.46668478797823,0,0.938760993154008,0.670025029767263,0.714130922658041,0.780534591431195,0.788175720530955,0.221464689648775,0.478364305972461,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,1.9266070798535,0.586058432961016,0,0.504941854408746,17.6684602873104,19.9123759591286,29.0821586939279,19.1175038362042,19.8290819933331,19.8153571552183,22.2645885921192,15.4895604692995,23.7172666767914,0.642642632843614,0,0,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.776152102696527,0.643011105094777,1.41872186913819,0.713475270408282,0.822745103010605,1.2178597964584,0.23467170806371,1.0591603543191,0,0,1.45317984026315,0.784068024066026,0.954978752025092,0.328281799490123,0.291480836629851,1.29797711407357,0,0.619160603889667,0,0,0,0,0,0,0,0,2.53068794864908,2.03319467126849,1.08005340821801,1.04544148007234,0.655087691238533,1.21377911746339,0.826534557253359,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0,0,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0.358053391334963,0.39736270956253,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,1.38097570952153,0,0.859265911718438,1.37016503954128,0,0,0.45032120322422,0.906284817968409,0,2.07574695168353,4.78829848081237,1.87806966329548,0,1.04806581313991,0.551530525350042,1.55572709461131,0.824140228955577,0.962757628775446,0.505394423527595,1.01391719956096,1.32038438970253,0.842773567228942,0.704276676453562,0.861532034334199,0.952587382566147,0.927074607558844,0.77163688185482,0.824171801606613,1.32479028120958,1.02860775715625,0.177475806159338,1.66905332963125,1.16277133305863,1.12931256498397,1.01537529470012,0.365855945745545,0.789209134313529,0.814824683075171,1.68342681497322,0.593175090620871,0.689531376628944,0.818462086339379,0.929621047115796,0.578719832943424,1.24905288968973,0.701794825336225,2.14871054048298,1.14772999241306,0.661774257358546,0|short_description=p6@Ednrb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13618 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P48302,uniprot:F8WJF4 | |||
|association_with_transcript=-35bp_to_ENSMUST00000022718,ENSMUST00000088530,NM_001136061,uc007uwx.2_5end | |||
|cluster_id=chr14:104243425..104243438,- | |||
|description=CAGE_peak_6_at_Ednrb_5end | |||
|id=chr14:104243425..104243438,- | |||
|ontology_enrichment_celltype=CL:0000540!6.97e-16!33;CL:0000047!6.97e-16!33;CL:0000031!6.97e-16!33;CL:0000404!6.97e-16!33;CL:0000221!2.92e-14!44;CL:0000133!2.92e-14!44;CL:0002319!1.32e-13!43;CL:0000393!1.12e-10!39;CL:0000211!1.12e-10!39;CL:0000055!4.89e-09!50;CL:0000117!6.37e-09!23;CL:0000337!6.37e-09!23;CL:0000107!5.20e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.55e-20,33;CL:0000047,1.55e-20,33;CL:0000031,1.55e-20,33;CL:0000404,1.55e-20,33;CL:0000221,8.16e-20,44;CL:0000133,8.16e-20,44;CL:0002319,9.08e-19,43;CL:0000393,6.40e-16,39;CL:0000211,6.40e-16,39;CL:0000107,2.40e-12,9;CL:0000117,8.67e-10,23;CL:0000337,8.67e-10,23;CL:0002321,1.22e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.57e-17!102;UBERON:0000924!1.57e-17!102;UBERON:0006601!1.57e-17!102;UBERON:0000073!7.96e-16!75;UBERON:0001016!7.96e-16!75;UBERON:0001017!7.13e-15!73;UBERON:0005743!7.13e-15!73;UBERON:0002346!3.78e-11!71;UBERON:0003075!3.78e-11!71;UBERON:0007284!3.78e-11!71;UBERON:0000010!7.21e-09!11;UBERON:0000468!3.55e-08!333;UBERON:0002410!5.20e-08!9;UBERON:0000033!1.12e-07!63;UBERON:0001049!5.03e-07!52;UBERON:0005068!5.03e-07!52;UBERON:0006241!5.03e-07!52;UBERON:0007135!5.03e-07!52;UBERON:0003056!8.39e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.16e-17,75;UBERON:0004121,1.19e-16,95;UBERON:0000924,1.19e-16,95;UBERON:0006601,1.19e-16,95;UBERON:0001017,2.04e-15,73;UBERON:0000010,8.90e-14,11;UBERON:0002410,2.40e-12,9;UBERON:0010371,7.39e-09,73;UBERON:0002346,1.19e-08,64;UBERON:0003075,1.19e-08,64;UBERON:0007284,1.19e-08,64;UBERON:0010314,9.09e-08,92 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,4.43681982454325,0,0,0,0,0,1.19840044207362,1.53687322128622,0.518448061542388,0.405017814995072,0.630974884054146,1.14260393761521,1.76694832761291,2.20483438586917,2.20444583341944,2.75765635983006,1.10115880999389,1.0214987046815,0.46081959976873,2.90149833006426,3.11057988248193,1.04182674111352,1.3959149950069,0.56276261003168,1.06958773443767,0.883885756421003,3.41692033917847,2.42319279572891,1.06016670666458,5.66786700800891,0,0,0,0,0,0,0.140444420131752,0,0,0,12.5350643601246,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,1.04091196059682,0.913396434936424,0.461230994512117,0.301445281105245,0.823120949949934,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,1.49790639404823,1.83000241127451,1.38219787324151,0.521472960576829,1.02286182932132,1.45451631191692,2.10913641988085,0.712875546952214,0.248813941220186,0,0.631325567659422,0.260240885925407,0.689706313300419,1.0803727788321,2.26057226753573,1.36072998302656,0.896796041993948,1.40552586839593,1.81092359517311,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,1.03562886267751,1.40715635988658,1.44049649168812,1.65721314909647,0.983821158737019,1.3884040159864,0.232533944750408,0.804820204198858,0.583826711835847,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.68231958851302,0.92614151141356,0,0.264450566663544,3.19932375802851,3.71578674976702,3.35055399437443,1.81515172161008,2.00140239460383,1.71203063501303,0,1.31759163779209,1.50801125280162,0.596869416123452,0.974820435595601,0,0,0.398282546508734,0,0.114248512609729,0,0.814605311381257,0.581857461502877,0.911765658574141,0.252946148497029,0,0,0.246794327843601,0,0.166845105716094,0.982794975566015,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,1.32643988239339,1.46668478797823,0,0.938760993154008,0.670025029767263,0.714130922658041,0.780534591431195,0.788175720530955,0.221464689648775,0.478364305972461,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,1.9266070798535,0.586058432961016,0,0.504941854408746,17.6684602873104,19.9123759591286,29.0821586939279,19.1175038362042,19.8290819933331,19.8153571552183,22.2645885921192,15.4895604692995,23.7172666767914,0.642642632843614,0,0,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.776152102696527,0.643011105094777,1.41872186913819,0.713475270408282,0.822745103010605,1.2178597964584,0.23467170806371,1.0591603543191,0,0,1.45317984026315,0.784068024066026,0.954978752025092,0.328281799490123,0.291480836629851,1.29797711407357,0,0.619160603889667,0,0,0,0,0,0,0,0,2.53068794864908,2.03319467126849,1.08005340821801,1.04544148007234,0.655087691238533,1.21377911746339,0.826534557253359,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.2604087696879,0,0,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0.358053391334963,0.39736270956253,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,1.38097570952153,0,0.859265911718438,1.37016503954128,0,0,0.45032120322422,0.906284817968409,0,2.07574695168353,4.78829848081237,1.87806966329548,0,1.04806581313991,0.551530525350042,1.55572709461131,0.824140228955577,0.962757628775446,0.505394423527595,1.01391719956096,1.32038438970253,0.842773567228942,0.704276676453562,0.861532034334199,0.952587382566147,0.927074607558844,0.77163688185482,0.824171801606613,1.32479028120958,1.02860775715625,0.177475806159338,1.66905332963125,1.16277133305863,1.12931256498397,1.01537529470012,0.365855945745545,0.789209134313529,0.814824683075171,1.68342681497322,0.593175090620871,0.689531376628944,0.818462086339379,0.929621047115796,0.578719832943424,1.24905288968973,0.701794825336225,2.14871054048298,1.14772999241306,0.661774257358546,0 | |||
|short_description=p6@Ednrb | |||
}} |
Revision as of 22:38, 3 August 2015
Short description: | p6@Ednrb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ednrb_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | -35bp_to_ENSMUST00000022718, ENSMUST00000088530, NM_001136061, uc007uwx.2_5end |
EntrezGene: | 13618 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.55e-20 | 33 |
neuronal stem cell | 1.55e-20 | 33 |
neuroblast | 1.55e-20 | 33 |
electrically signaling cell | 1.55e-20 | 33 |
ectodermal cell | 8.16e-20 | 44 |
neurectodermal cell | 8.16e-20 | 44 |
neural cell | 9.08e-19 | 43 |
electrically responsive cell | 6.40e-16 | 39 |
electrically active cell | 6.40e-16 | 39 |
autonomic neuron | 2.40e-12 | 9 |
CNS neuron (sensu Vertebrata) | 8.67e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.67e-10 | 23 |
embryonic cell | 1.22e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.16e-17 | 75 |
ectoderm-derived structure | 1.19e-16 | 95 |
ectoderm | 1.19e-16 | 95 |
presumptive ectoderm | 1.19e-16 | 95 |
central nervous system | 2.04e-15 | 73 |
peripheral nervous system | 8.90e-14 | 11 |
autonomic nervous system | 2.40e-12 | 9 |
ecto-epithelium | 7.39e-09 | 73 |
neurectoderm | 1.19e-08 | 64 |
neural plate | 1.19e-08 | 64 |
presumptive neural plate | 1.19e-08 | 64 |
structure with developmental contribution from neural crest | 9.09e-08 | 92 |