FFCP PHASE1:Mm9::chr9:102620754..102620820,+: Difference between revisions
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{{FFCP|EntrezGene=56332|HGNC=|MCL_coexpression_id=636|UniProt=B8JK85,B8JK83,B8JK84|association_with_transcript=0bp_to_ENSMUST00000134483,ENSMUST00000145937,ENSMUST00000156485_5end|description=CAGE_peak_4_at_Amotl2_5end|id=chr9:102620754..102620820,+|ontology_enrichment_celltype=CL:0000055!3.97e-22!50;CL:0000221!2.62e-18!44;CL:0000133!2.62e-18!44;CL:0002319!6.10e-18!43;CL:0000393!1.08e-16!39;CL:0000211!1.08e-16!39;CL:0002321!1.69e-15!70;CL:0000220!1.69e-15!70;CL:0000540!7.04e-13!33;CL:0000047!7.04e-13!33;CL:0000031!7.04e-13!33;CL:0000404!7.04e-13!33;CL:0000117!2.34e-10!23;CL:0000337!2.34e-10!23;CL:0002453!8.19e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,4.28e-19,44;CL:0000133,4.28e-19,44;CL:0002319,1.04e-18,43;CL:0000393,2.11e-17,39;CL:0000211,2.11e-17,39;CL:0002321,1.65e-15,70;CL:0000540,2.07e-13,33;CL:0000047,2.07e-13,33;CL:0000031,2.07e-13,33;CL:0000404,2.07e-13,33;CL:0000117,9.04e-11,23;CL:0000337,9.04e-11,23;CL:0002453,4.63e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.22e-13!102;UBERON:0000924!1.22e-13!102;UBERON:0006601!1.22e-13!102;UBERON:0000073!3.24e-11!75;UBERON:0001016!3.24e-11!75;UBERON:0001017!3.28e-11!73;UBERON:0005743!3.28e-11!73;UBERON:0002346!1.04e-07!71;UBERON:0003075!1.04e-07!71;UBERON:0007284!1.04e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.78e-13,95;UBERON:0000924,2.78e-13,95;UBERON:0006601,2.78e-13,95;UBERON:0001016,3.60e-11,75;UBERON:0001017,3.68e-11,73;UBERON:0010314,1.67e-09,92;UBERON:0010371,1.27e-08,73;UBERON:0002346,3.59e-07,64;UBERON:0003075,3.59e-07,64;UBERON:0007284,3.59e-07,64|phase1_expression=4.48416771893423,0.697950815278722,0,1.81478526784098,1.00179145989269,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.12608225377674,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,1.1554064790051,0.332469290716985,0.408338712524738,0,0,0,0,0.683045484958446,0,9.69405498411945,10.5432008468295,11.3798986340243,26.6013057078333,37.2823017410564,35.36947542025,48.6074747685709,13.7186693192855,17.2503077237966,0,0,0,15.1783067261209,22.9226751951005,25.7836046138721,10.1158230429799,8.46385566835253,6.97214543856797,15.5868484751801,5.33576877666684,4.49949858640699,3.9554654502679,4.9733608046227,12.8828047522914,16.5213871288268,5.18448061542388,4.45519596494579,5.67877395648731,3.71346279724945,3.53389665522582,5.02212276781312,6.61333750025831,4.5960939330501,2.20231761998777,3.31987079021488,3.22573719838111,11.7378796079873,11.161492519494,7.29278718779464,3.90856198601933,4.50210088025344,3.81995619442025,3.83017161115768,2.27794689278565,3.91438836233131,2.65041676666144,1.20914496170857,15.3628179011889,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,0,0.561777680527007,3.57903677413921,5.19572009205738,6.71345191569646,3.66192891419369,14.115912515575,5.09610479413291,14.2213340630666,1.73192832808971,1.26679932737549,1.51657333504435,0.45673551887624,0,2.82040064223167,1.90833859442749,1.21786191324856,0.691846491768175,1.80867168663147,2.23418543557839,3.64433114856059,1.97755974187499,4.77177877835708,0,1.45590164952668,0.441683036920787,0.484875253135222,1.86391761218122,2.04946557908083,1.25668024088073,1.53274233125155,0,0,0,1.19832511523858,2.28750301409313,2.76439574648302,0.521472960576829,1.02286182932132,3.1168206683934,1.62241263067758,2.74966282395854,0.622034853050465,0.252722758433675,0.841767423545896,1.95180664444056,2.98872735763515,3.60124259610698,4.06903008156431,4.89862793889561,6.91814089538189,6.65282244374075,0.776110112217047,0.862271971731369,0.945530400839096,1.93546236580344,2.6303487891309,1.66828349535359,3.1342694986995,3.2925141825271,0.995171334092466,0,0,0,2.48550927042602,1.64168241986767,1.2604344302271,2.60419209143731,2.36117078096885,1.3884040159864,2.55787339225449,1.3413670069981,3.97002164048376,2.13927804887525,1.64167464079095,0.972825714550269,2.04679982395465,1.3173006917463,2.54992195644706,1.05144974282064,3.49875682089567,0.330418782983798,0.264450566663544,1.70630600428187,1.62565670302307,1.03093969057675,1.81515172161008,1.11189021922435,0.951128130562796,1.89811624617805,1.15289268306808,1.00534083520108,0.994782360205754,0.974820435595601,0.898819408654221,0.864552199498777,0.796565093017469,1.89667900953082,1.37098215131675,0,2.44381593414377,1.16371492300575,1.68325967736765,1.7706230394792,1.03327103585722,1.8839847340965,1.85095745882701,0.592905254174298,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0,0,0.575392274901621,0.324270453550071,0,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,6.09685527549795,0.947457058852424,2.93336957595647,1.18821560042632,1.17345124144251,2.51259386162724,3.09456733151818,6.43941037930736,5.51723004371669,6.42247599981447,5.58091690301205,7.20998584749247,3.62638461918381,5.93061140184197,0,0,1.47529281905711,2.20749397043786,3.69266356971921,4.80567915028033,6.22952792431367,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56332 | |||
|HGNC= | |||
|MCL_coexpression_id=636 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B8JK85,uniprot:B8JK83,uniprot:B8JK84 | |||
|association_with_transcript=0bp_to_ENSMUST00000134483,ENSMUST00000145937,ENSMUST00000156485_5end | |||
|cluster_id=chr9:102620754..102620820,+ | |||
|description=CAGE_peak_4_at_Amotl2_5end | |||
|id=chr9:102620754..102620820,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.97e-22!50;CL:0000221!2.62e-18!44;CL:0000133!2.62e-18!44;CL:0002319!6.10e-18!43;CL:0000393!1.08e-16!39;CL:0000211!1.08e-16!39;CL:0002321!1.69e-15!70;CL:0000220!1.69e-15!70;CL:0000540!7.04e-13!33;CL:0000047!7.04e-13!33;CL:0000031!7.04e-13!33;CL:0000404!7.04e-13!33;CL:0000117!2.34e-10!23;CL:0000337!2.34e-10!23;CL:0002453!8.19e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.28e-19,44;CL:0000133,4.28e-19,44;CL:0002319,1.04e-18,43;CL:0000393,2.11e-17,39;CL:0000211,2.11e-17,39;CL:0002321,1.65e-15,70;CL:0000540,2.07e-13,33;CL:0000047,2.07e-13,33;CL:0000031,2.07e-13,33;CL:0000404,2.07e-13,33;CL:0000117,9.04e-11,23;CL:0000337,9.04e-11,23;CL:0002453,4.63e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.22e-13!102;UBERON:0000924!1.22e-13!102;UBERON:0006601!1.22e-13!102;UBERON:0000073!3.24e-11!75;UBERON:0001016!3.24e-11!75;UBERON:0001017!3.28e-11!73;UBERON:0005743!3.28e-11!73;UBERON:0002346!1.04e-07!71;UBERON:0003075!1.04e-07!71;UBERON:0007284!1.04e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.78e-13,95;UBERON:0000924,2.78e-13,95;UBERON:0006601,2.78e-13,95;UBERON:0001016,3.60e-11,75;UBERON:0001017,3.68e-11,73;UBERON:0010314,1.67e-09,92;UBERON:0010371,1.27e-08,73;UBERON:0002346,3.59e-07,64;UBERON:0003075,3.59e-07,64;UBERON:0007284,3.59e-07,64 | |||
|phase1_expression=4.48416771893423,0.697950815278722,0,1.81478526784098,1.00179145989269,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.12608225377674,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,1.1554064790051,0.332469290716985,0.408338712524738,0,0,0,0,0.683045484958446,0,9.69405498411945,10.5432008468295,11.3798986340243,26.6013057078333,37.2823017410564,35.36947542025,48.6074747685709,13.7186693192855,17.2503077237966,0,0,0,15.1783067261209,22.9226751951005,25.7836046138721,10.1158230429799,8.46385566835253,6.97214543856797,15.5868484751801,5.33576877666684,4.49949858640699,3.9554654502679,4.9733608046227,12.8828047522914,16.5213871288268,5.18448061542388,4.45519596494579,5.67877395648731,3.71346279724945,3.53389665522582,5.02212276781312,6.61333750025831,4.5960939330501,2.20231761998777,3.31987079021488,3.22573719838111,11.7378796079873,11.161492519494,7.29278718779464,3.90856198601933,4.50210088025344,3.81995619442025,3.83017161115768,2.27794689278565,3.91438836233131,2.65041676666144,1.20914496170857,15.3628179011889,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,0,0.561777680527007,3.57903677413921,5.19572009205738,6.71345191569646,3.66192891419369,14.115912515575,5.09610479413291,14.2213340630666,1.73192832808971,1.26679932737549,1.51657333504435,0.45673551887624,0,2.82040064223167,1.90833859442749,1.21786191324856,0.691846491768175,1.80867168663147,2.23418543557839,3.64433114856059,1.97755974187499,4.77177877835708,0,1.45590164952668,0.441683036920787,0.484875253135222,1.86391761218122,2.04946557908083,1.25668024088073,1.53274233125155,0,0,0,1.19832511523858,2.28750301409313,2.76439574648302,0.521472960576829,1.02286182932132,3.1168206683934,1.62241263067758,2.74966282395854,0.622034853050465,0.252722758433675,0.841767423545896,1.95180664444056,2.98872735763515,3.60124259610698,4.06903008156431,4.89862793889561,6.91814089538189,6.65282244374075,0.776110112217047,0.862271971731369,0.945530400839096,1.93546236580344,2.6303487891309,1.66828349535359,3.1342694986995,3.2925141825271,0.995171334092466,0,0,0,2.48550927042602,1.64168241986767,1.2604344302271,2.60419209143731,2.36117078096885,1.3884040159864,2.55787339225449,1.3413670069981,3.97002164048376,2.13927804887525,1.64167464079095,0.972825714550269,2.04679982395465,1.3173006917463,2.54992195644706,1.05144974282064,3.49875682089567,0.330418782983798,0.264450566663544,1.70630600428187,1.62565670302307,1.03093969057675,1.81515172161008,1.11189021922435,0.951128130562796,1.89811624617805,1.15289268306808,1.00534083520108,0.994782360205754,0.974820435595601,0.898819408654221,0.864552199498777,0.796565093017469,1.89667900953082,1.37098215131675,0,2.44381593414377,1.16371492300575,1.68325967736765,1.7706230394792,1.03327103585722,1.8839847340965,1.85095745882701,0.592905254174298,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0,0,0.575392274901621,0.324270453550071,0,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,6.09685527549795,0.947457058852424,2.93336957595647,1.18821560042632,1.17345124144251,2.51259386162724,3.09456733151818,6.43941037930736,5.51723004371669,6.42247599981447,5.58091690301205,7.20998584749247,3.62638461918381,5.93061140184197,0,0,1.47529281905711,2.20749397043786,3.69266356971921,4.80567915028033,6.22952792431367,1.00988370881749,3.47059041357882,3.90438744296638,3.23135096599198,4.77937595905104,2.45078541490634,3.67999490025482,2.02405350837447,2.33804686329049,4.34816555741176,0.321321316421807,1.70328102249922,1.42452482933804,3.4206261464251,0.824850614862677,1.32745138339963,1.45668381692989,0.906970670894253,0.943025398779491,0.885905678642318,0.922305443831782,2.84271122485043,1.09060118843252,1.42598951353889,0.948110273807448,2.10837217149998,2.06271086496374,0,2.70091641046965,2.97524972700335,1.28602221018955,0.886701168211368,1.78368817602071,1.48094118541909,2.43571959291679,1.87737366450968,4.44847348814022,0,3.13283880588812,3.06782410722221,2.35220407219808,2.26807453605959,2.29797259643086,1.1659233465194,2.96680483216816,0.512612642393558,3.30218988741156,1.11116716421827,0.941842285023455,0.136694227721025,0.457556346413045,0,0,0,1.90934123603023,2.37251995185852,1.21991680276109,2.37611749807963,1.04544148007234,1.9652630737156,3.2367443132357,2.64491058321075,2.35580347785627,0.388844919875379,0,0,2.0932316446157,1.98550188548517,1.75006069509643,1.54991788173277,0.506868376472335,2.93393096614385,2.3436789271911,1.99232754408851,0,0,0.632022241256357,0.810900861160657,0.616265742988964,0.909445760844565,0.537080087002444,0.198681354781265,0.360586348559907,0.443068581523732,0,0,0.100826185136841,0,0,0.116876902181569,1.58711268530648,2.66383144048878,0.358855426437903,3.52557694364565,3.28422309854724,1.50145980360946,0.915758121336325,0.214368379079066,1.50471631210609,0.564751842617067,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0,1.35004500046361,0.45032120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| |||
|short_description=p4@Amotl2 | |||
}} |
Revision as of 10:38, 4 August 2015
Short description: | p4@Amotl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Amotl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:636 |
Association with transcript: | 0bp_to_ENSMUST00000134483, ENSMUST00000145937, ENSMUST00000156485_5end |
EntrezGene: | 56332 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.28e-19 | 44 |
neurectodermal cell | 4.28e-19 | 44 |
neural cell | 1.04e-18 | 43 |
electrically responsive cell | 2.11e-17 | 39 |
electrically active cell | 2.11e-17 | 39 |
embryonic cell | 1.65e-15 | 70 |
neuron | 2.07e-13 | 33 |
neuronal stem cell | 2.07e-13 | 33 |
neuroblast | 2.07e-13 | 33 |
electrically signaling cell | 2.07e-13 | 33 |
CNS neuron (sensu Vertebrata) | 9.04e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.04e-11 | 23 |
oligodendrocyte precursor cell | 4.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.78e-13 | 95 |
ectoderm | 2.78e-13 | 95 |
presumptive ectoderm | 2.78e-13 | 95 |
nervous system | 3.60e-11 | 75 |
central nervous system | 3.68e-11 | 73 |
structure with developmental contribution from neural crest | 1.67e-09 | 92 |
ecto-epithelium | 1.27e-08 | 73 |
neurectoderm | 3.59e-07 | 64 |
neural plate | 3.59e-07 | 64 |
presumptive neural plate | 3.59e-07 | 64 |