FFCP PHASE1:Mm9::chr7:144506051..144506062,-: Difference between revisions
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{{FFCP|EntrezGene=13593|HGNC=|MCL_coexpression_id=618|UniProt=Q6NXL3|association_with_transcript=34bp_to_ENSMUST00000168203_5end|description=CAGE_peak_5_at_Ebf3_5end|id=chr7:144506051..144506062,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-15,23;CL:0000337,1.66e-15,23;CL:0002612,6.18e-13,3;CL:0000120,6.76e-13,3;CL:0000540,2.76e-10,33;CL:0000047,2.76e-10,33;CL:0000031,2.76e-10,33;CL:0000404,2.76e-10,33;CL:0002611,1.06e-08,2;CL:0000393,1.94e-08,39;CL:0000211,1.94e-08,39;CL:0002319,1.71e-07,43;CL:0000221,2.77e-07,44;CL:0000133,2.77e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!2.90e-07!6;UBERON:0005174!2.90e-07!6;UBERON:0001137!2.90e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.10e-23,6;UBERON:0005174,4.10e-23,6;UBERON:0001137,4.10e-23,6;UBERON:0001948,5.61e-20,5;UBERON:0002315,5.61e-20,5;UBERON:0002257,6.18e-13,3;UBERON:0003076,2.74e-11,12;UBERON:0003057,2.74e-11,12;UBERON:0002102,8.85e-09,7;UBERON:0004710,8.85e-09,7;UBERON:0005419,8.85e-09,7;UBERON:0005417,8.85e-09,7;UBERON:0005729,8.85e-09,7;UBERON:0002256,1.06e-08,2;UBERON:0010708,1.08e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,10.7227724255587,3.70293685490423,6.33831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,3.42781181284564,1.76694832761291,0,0,0,0,0.127687338085188,0,1.84640802822271,1.00636407962651,0,0,0.56276261003168,0.15279824777681,5.89257170947335,4.41352210477219,13.6071595452469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.376999773989026,0,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0.459804208866946,1.98068342785884,0.753524089178575,0.680364991513279,0.384341160854549,0.843315521037559,0.258703370739016,0.646703978798527,2.08016688184601,1.75951124163949,1.7535658594206,1.66828349535359,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,1.36586884603307,0.486213434136588,2.51535795153579,0.183843508450014,1.11123363900808,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.754505365544305,1.31098110457835,0.704276676453562,0.804096565378586,0.476293691283074,0.811190281613988,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.761531471025089,0.548783918618318,0.526139422875686,0.543216455383447,0,0.711810108745045,1.0835493061312,1.22769312950907,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.429742108096597,0.956441660344217,0.220591419119515,0.231867835620421|short_description=p5@Ebf3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13593 | |||
|HGNC= | |||
|MCL_coexpression_id=618 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6NXL3 | |||
|association_with_transcript=34bp_to_ENSMUST00000168203_5end | |||
|cluster_id=chr7:144506051..144506062,- | |||
|description=CAGE_peak_5_at_Ebf3_5end | |||
|id=chr7:144506051..144506062,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-15,23;CL:0000337,1.66e-15,23;CL:0002612,6.18e-13,3;CL:0000120,6.76e-13,3;CL:0000540,2.76e-10,33;CL:0000047,2.76e-10,33;CL:0000031,2.76e-10,33;CL:0000404,2.76e-10,33;CL:0002611,1.06e-08,2;CL:0000393,1.94e-08,39;CL:0000211,1.94e-08,39;CL:0002319,1.71e-07,43;CL:0000221,2.77e-07,44;CL:0000133,2.77e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!2.90e-07!6;UBERON:0005174!2.90e-07!6;UBERON:0001137!2.90e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.10e-23,6;UBERON:0005174,4.10e-23,6;UBERON:0001137,4.10e-23,6;UBERON:0001948,5.61e-20,5;UBERON:0002315,5.61e-20,5;UBERON:0002257,6.18e-13,3;UBERON:0003076,2.74e-11,12;UBERON:0003057,2.74e-11,12;UBERON:0002102,8.85e-09,7;UBERON:0004710,8.85e-09,7;UBERON:0005419,8.85e-09,7;UBERON:0005417,8.85e-09,7;UBERON:0005729,8.85e-09,7;UBERON:0002256,1.06e-08,2;UBERON:0010708,1.08e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,10.7227724255587,3.70293685490423,6.33831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,3.42781181284564,1.76694832761291,0,0,0,0,0.127687338085188,0,1.84640802822271,1.00636407962651,0,0,0.56276261003168,0.15279824777681,5.89257170947335,4.41352210477219,13.6071595452469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.376999773989026,0,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0.459804208866946,1.98068342785884,0.753524089178575,0.680364991513279,0.384341160854549,0.843315521037559,0.258703370739016,0.646703978798527,2.08016688184601,1.75951124163949,1.7535658594206,1.66828349535359,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0.308132871494482,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,1.36586884603307,0.486213434136588,2.51535795153579,0.183843508450014,1.11123363900808,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.754505365544305,1.31098110457835,0.704276676453562,0.804096565378586,0.476293691283074,0.811190281613988,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.761531471025089,0.548783918618318,0.526139422875686,0.543216455383447,0,0.711810108745045,1.0835493061312,1.22769312950907,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.429742108096597,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Ebf3 | |||
}} |
Revision as of 10:44, 4 August 2015
Short description: | p5@Ebf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ebf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:618 |
Association with transcript: | 34bp_to_ENSMUST00000168203_5end |
EntrezGene: | 13593 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.66e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-15 | 23 |
neuron of the ventral spinal cord | 6.18e-13 | 3 |
granule cell | 6.76e-13 | 3 |
neuron | 2.76e-10 | 33 |
neuronal stem cell | 2.76e-10 | 33 |
neuroblast | 2.76e-10 | 33 |
electrically signaling cell | 2.76e-10 | 33 |
neuron of the dorsal spinal cord | 1.06e-08 | 2 |
electrically responsive cell | 1.94e-08 | 39 |
electrically active cell | 1.94e-08 | 39 |
neural cell | 1.71e-07 | 43 |
ectodermal cell | 2.77e-07 | 44 |
neurectodermal cell | 2.77e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.10e-23 | 6 |
dorsal region element | 4.10e-23 | 6 |
dorsum | 4.10e-23 | 6 |
regional part of spinal cord | 5.61e-20 | 5 |
gray matter of spinal cord | 5.61e-20 | 5 |
ventral horn of spinal cord | 6.18e-13 | 3 |
posterior neural tube | 2.74e-11 | 12 |
chordal neural plate | 2.74e-11 | 12 |
forelimb | 8.85e-09 | 7 |
pectoral appendage | 8.85e-09 | 7 |
pectoral appendage bud | 8.85e-09 | 7 |
forelimb bud | 8.85e-09 | 7 |
forelimb/pectoral fin field | 8.85e-09 | 7 |
dorsal horn of spinal cord | 1.06e-08 | 2 |
pectoral complex | 1.08e-07 | 8 |