FFCP PHASE1:Mm9::chr4:102641678..102641681,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:102641678..102641681,+|id=chr4:102641678..102641681,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,4.34e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.15e-13!71;UBERON:0003075!3.15e-13!71;UBERON:0007284!3.15e-13!71;UBERON:0004121!1.03e-11!102;UBERON:0000924!1.03e-11!102;UBERON:0006601!1.03e-11!102;UBERON:0003056!3.04e-11!49;UBERON:0000033!1.15e-10!63;UBERON:0007811!2.46e-09!86;UBERON:0001017!5.94e-09!73;UBERON:0005743!5.94e-09!73;UBERON:0000073!2.29e-08!75;UBERON:0001016!2.29e-08!75;UBERON:0000153!2.60e-08!94;UBERON:0000970!6.95e-08!9;UBERON:0000019!6.95e-08!9;UBERON:0000047!6.95e-08!9;UBERON:0004088!6.95e-08!9;UBERON:0002104!6.95e-08!9;UBERON:0001456!6.95e-08!9;UBERON:0003072!6.95e-08!9;UBERON:0003071!6.95e-08!9;UBERON:0004128!6.95e-08!9;UBERON:0001049!1.57e-07!52;UBERON:0005068!1.57e-07!52;UBERON:0006241!1.57e-07!52;UBERON:0007135!1.57e-07!52;UBERON:0000955!2.49e-07!50;UBERON:0006238!2.49e-07!50;UBERON:0002616!8.00e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.33e-13,9;UBERON:0000019,2.33e-13,9;UBERON:0000047,2.33e-13,9;UBERON:0010312,2.33e-13,9;UBERON:0004088,2.33e-13,9;UBERON:0002104,2.33e-13,9;UBERON:0001456,2.33e-13,9;UBERON:0003072,2.33e-13,9;UBERON:0004128,2.33e-13,9;UBERON:0003071,2.33e-13,9;UBERON:0004733,1.57e-11,6;UBERON:0004732,1.57e-11,6;UBERON:0002028,1.57e-11,6;UBERON:0007277,1.57e-11,6;UBERON:0000013,4.61e-11,3;UBERON:0001444,5.50e-11,11;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0000020,4.29e-10,12;UBERON:0001032,4.29e-10,12;UBERON:0004456,4.29e-10,12;UBERON:0000033,2.45e-09,13;UBERON:0005085,2.45e-09,13;UBERON:0002346,1.65e-08,64;UBERON:0003075,1.65e-08,64;UBERON:0007284,1.65e-08,64;UBERON:0002037,3.73e-08,4;UBERON:0002680,3.73e-08,4;UBERON:0001895,3.73e-08,4;UBERON:0010092,3.73e-08,4;UBERON:0006215,3.73e-08,4;UBERON:0002410,4.34e-08,9;UBERON:0010371,2.36e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0,0.122490799214954,0.479227355091182,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0,0,1.17112318804619,1.25668024088073,0,0,0,0,0.599162557619291,1.83000241127451,0.753926112677186,0.521472960576829,0.255715457330331,0.83115217823824,0.973447578406546,0,0,0.252722758433675,1.05220927943237,0.130120442962704,0.229902104433473,0.900310649026746,0.60281927134286,0.95251098811859,1.92170580427275,1.03071897015702,3.62184719034622,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0,0,0,0,0.841159794256509,0.514523061896422,0,0,0,0,0,0,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.788175720530955,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,0.481651769963376,1.40654023910644,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,1.33679204449436,0.283076530788832,2.42886421004937,1.46127928955656,0.790575555893047,0.642642632843614,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0,0.755393897389701,0,0.45032120322422,0.906284817968409,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.384150914429216,0.0574354689556133,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0,0|short_description=p@chr4:102641678..102641681,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:102641678..102641681,+ | |||
|description=CAGE_peak_at_chr4:102641678..102641681,+ | |||
|id=chr4:102641678..102641681,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.34e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.15e-13!71;UBERON:0003075!3.15e-13!71;UBERON:0007284!3.15e-13!71;UBERON:0004121!1.03e-11!102;UBERON:0000924!1.03e-11!102;UBERON:0006601!1.03e-11!102;UBERON:0003056!3.04e-11!49;UBERON:0000033!1.15e-10!63;UBERON:0007811!2.46e-09!86;UBERON:0001017!5.94e-09!73;UBERON:0005743!5.94e-09!73;UBERON:0000073!2.29e-08!75;UBERON:0001016!2.29e-08!75;UBERON:0000153!2.60e-08!94;UBERON:0000970!6.95e-08!9;UBERON:0000019!6.95e-08!9;UBERON:0000047!6.95e-08!9;UBERON:0004088!6.95e-08!9;UBERON:0002104!6.95e-08!9;UBERON:0001456!6.95e-08!9;UBERON:0003072!6.95e-08!9;UBERON:0003071!6.95e-08!9;UBERON:0004128!6.95e-08!9;UBERON:0001049!1.57e-07!52;UBERON:0005068!1.57e-07!52;UBERON:0006241!1.57e-07!52;UBERON:0007135!1.57e-07!52;UBERON:0000955!2.49e-07!50;UBERON:0006238!2.49e-07!50;UBERON:0002616!8.00e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.33e-13,9;UBERON:0000019,2.33e-13,9;UBERON:0000047,2.33e-13,9;UBERON:0010312,2.33e-13,9;UBERON:0004088,2.33e-13,9;UBERON:0002104,2.33e-13,9;UBERON:0001456,2.33e-13,9;UBERON:0003072,2.33e-13,9;UBERON:0004128,2.33e-13,9;UBERON:0003071,2.33e-13,9;UBERON:0004733,1.57e-11,6;UBERON:0004732,1.57e-11,6;UBERON:0002028,1.57e-11,6;UBERON:0007277,1.57e-11,6;UBERON:0000013,4.61e-11,3;UBERON:0001444,5.50e-11,11;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0000020,4.29e-10,12;UBERON:0001032,4.29e-10,12;UBERON:0004456,4.29e-10,12;UBERON:0000033,2.45e-09,13;UBERON:0005085,2.45e-09,13;UBERON:0002346,1.65e-08,64;UBERON:0003075,1.65e-08,64;UBERON:0007284,1.65e-08,64;UBERON:0002037,3.73e-08,4;UBERON:0002680,3.73e-08,4;UBERON:0001895,3.73e-08,4;UBERON:0010092,3.73e-08,4;UBERON:0006215,3.73e-08,4;UBERON:0002410,4.34e-08,9;UBERON:0010371,2.36e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0,0.122490799214954,0.479227355091182,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0,0,1.17112318804619,1.25668024088073,0,0,0,0,0.599162557619291,1.83000241127451,0.753926112677186,0.521472960576829,0.255715457330331,0.83115217823824,0.973447578406546,0,0,0.252722758433675,1.05220927943237,0.130120442962704,0.229902104433473,0.900310649026746,0.60281927134286,0.95251098811859,1.92170580427275,1.03071897015702,3.62184719034622,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0,0,0,0,0.841159794256509,0.514523061896422,0,0,0,0,0,0,0,0,0,0.329397909448022,0.502670417600539,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.788175720530955,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,0.481651769963376,1.40654023910644,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,1.33679204449436,0.283076530788832,2.42886421004937,1.46127928955656,0.790575555893047,0.642642632843614,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0,0.755393897389701,0,0.45032120322422,0.906284817968409,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.384150914429216,0.0574354689556133,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0.409231043169689,0.309873682371932,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:102641678..102641681,+ | |||
}} |
Latest revision as of 11:11, 4 August 2015
Short description: | p@chr4:102641678..102641681, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:102641678..102641681, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.34e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
eye | 2.33e-13 | 9 |
camera-type eye | 2.33e-13 | 9 |
simple eye | 2.33e-13 | 9 |
immature eye | 2.33e-13 | 9 |
ocular region | 2.33e-13 | 9 |
visual system | 2.33e-13 | 9 |
face | 2.33e-13 | 9 |
optic cup | 2.33e-13 | 9 |
optic vesicle | 2.33e-13 | 9 |
eye primordium | 2.33e-13 | 9 |
segmental subdivision of hindbrain | 1.57e-11 | 6 |
segmental subdivision of nervous system | 1.57e-11 | 6 |
hindbrain | 1.57e-11 | 6 |
presumptive hindbrain | 1.57e-11 | 6 |
sympathetic nervous system | 4.61e-11 | 3 |
subdivision of head | 5.50e-11 | 11 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
sense organ | 4.29e-10 | 12 |
sensory system | 4.29e-10 | 12 |
entire sense organ system | 4.29e-10 | 12 |
head | 2.45e-09 | 13 |
ectodermal placode | 2.45e-09 | 13 |
neurectoderm | 1.65e-08 | 64 |
neural plate | 1.65e-08 | 64 |
presumptive neural plate | 1.65e-08 | 64 |
cerebellum | 3.73e-08 | 4 |
regional part of metencephalon | 3.73e-08 | 4 |
metencephalon | 3.73e-08 | 4 |
future metencephalon | 3.73e-08 | 4 |
rhombic lip | 3.73e-08 | 4 |
autonomic nervous system | 4.34e-08 | 9 |
ecto-epithelium | 2.36e-07 | 73 |