FFCP PHASE1:Mm9::chr19:6164433..6164446,+: Difference between revisions
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{{FFCP|EntrezGene=74481|HGNC=|MCL_coexpression_id=12|UniProt=Q8R1H8|association_with_transcript=0bp_to_ENSMUST00000045042_5end|description=CAGE_peak_2_at_Batf2_5end|id=chr19:6164433..6164446,+|ontology_enrichment_celltype=CL:0002563!1.30e-07!9;CL:0002251!1.30e-07!9;CL:0000239!1.94e-07!6;CL:0000677!1.94e-07!6;CL:0000212!1.94e-07!6;CL:0000584!1.94e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.19e-18,6;CL:0000677,1.19e-18,6;CL:0000584,1.19e-18,6;CL:0000075,6.61e-16,7;CL:0002563,3.07e-12,9;CL:0002251,3.07e-12,9;CL:0000066,1.25e-10,25;CL:0002092,1.29e-10,3;CL:0002540,1.29e-10,3;CL:0000473,1.74e-10,7;CL:0000682,3.30e-09,3;CL:0002476,3.46e-07,2;CL:0002076,4.30e-07,15;CL:0000223,5.99e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.26e-13!15;UBERON:0001242!1.03e-11!13;UBERON:0000060!1.03e-11!13;UBERON:0001262!1.03e-11!13;UBERON:0004786!1.03e-11!13;UBERON:0004923!1.13e-08!24;UBERON:0000160!1.31e-08!43;UBERON:0005409!4.13e-08!59;UBERON:0007023!5.49e-08!51;UBERON:0003350!1.30e-07!9;UBERON:0004808!1.30e-07!9;UBERON:0001277!1.30e-07!9;UBERON:0001007!1.80e-07!128;UBERON:0001555!1.80e-07!128;UBERON:0007026!1.80e-07!128;UBERON:0004119!3.90e-07!130;UBERON:0000925!3.90e-07!130;UBERON:0006595!3.90e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.14e-28,15;UBERON:0001242,2.73e-23,13;UBERON:0001262,2.73e-23,13;UBERON:0004786,2.73e-23,13;UBERON:0000160,3.55e-23,31;UBERON:0004923,5.09e-17,24;UBERON:0005409,4.59e-16,47;UBERON:0003350,3.07e-12,9;UBERON:0004808,3.07e-12,9;UBERON:0001277,3.07e-12,9;UBERON:0000331,1.73e-10,3;UBERON:0002116,1.73e-10,3;UBERON:0001204,1.73e-10,3;UBERON:0001168,1.73e-10,3;UBERON:0000485,6.68e-10,11;UBERON:0002108,5.78e-08,4;UBERON:0001155,9.31e-08,2;UBERON:0000059,9.31e-08,2;UBERON:0001962,4.29e-07,2;UBERON:0001961,4.29e-07,2;UBERON:0001744,4.29e-07,2;UBERON:0001007,7.05e-07,116;UBERON:0001555,7.05e-07,116;UBERON:0007026,7.05e-07,116|phase1_expression=0,6.2815573375085,4.09499315450582,6.0492842261366,5.00895729946347,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.850432901510698,0,0,3.19984845586813,2.2940928106717,1.14846392823004,1.7230479846363,2.37018355954478,5.13063232532209,4.78857246543868,3.10422714917427,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6996991518442,5.93319817540185,7.8152812644071,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0,4.05810284182349,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.776813650941515,0.742210695324124,0,0,0,0.150722640552623,0,0.125666591329675,0,1.15679485535929,0,0,0.220841518460394,0,3.72783522436244,0,0.209446706813455,9.70736809792647,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0.210289948564127,0,9.58214470653014,2.3800550999719,0,0,0.257734922644187,0,0,0.190225626112559,2.37264530772256,0,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.432276099749388,1.99141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.442830443938806,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0.923765950833023,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.518054945597687,0.578596234326046,3.01582567878545,2.71952841909355,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0.188368457004691,0.27338845544205,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p2@Batf2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74481 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R1H8 | |||
|association_with_transcript=0bp_to_ENSMUST00000045042_5end | |||
|cluster_id=chr19:6164433..6164446,+ | |||
|description=CAGE_peak_2_at_Batf2_5end | |||
|id=chr19:6164433..6164446,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.30e-07!9;CL:0002251!1.30e-07!9;CL:0000239!1.94e-07!6;CL:0000677!1.94e-07!6;CL:0000212!1.94e-07!6;CL:0000584!1.94e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.19e-18,6;CL:0000677,1.19e-18,6;CL:0000584,1.19e-18,6;CL:0000075,6.61e-16,7;CL:0002563,3.07e-12,9;CL:0002251,3.07e-12,9;CL:0000066,1.25e-10,25;CL:0002092,1.29e-10,3;CL:0002540,1.29e-10,3;CL:0000473,1.74e-10,7;CL:0000682,3.30e-09,3;CL:0002476,3.46e-07,2;CL:0002076,4.30e-07,15;CL:0000223,5.99e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.26e-13!15;UBERON:0001242!1.03e-11!13;UBERON:0000060!1.03e-11!13;UBERON:0001262!1.03e-11!13;UBERON:0004786!1.03e-11!13;UBERON:0004923!1.13e-08!24;UBERON:0000160!1.31e-08!43;UBERON:0005409!4.13e-08!59;UBERON:0007023!5.49e-08!51;UBERON:0003350!1.30e-07!9;UBERON:0004808!1.30e-07!9;UBERON:0001277!1.30e-07!9;UBERON:0001007!1.80e-07!128;UBERON:0001555!1.80e-07!128;UBERON:0007026!1.80e-07!128;UBERON:0004119!3.90e-07!130;UBERON:0000925!3.90e-07!130;UBERON:0006595!3.90e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.14e-28,15;UBERON:0001242,2.73e-23,13;UBERON:0001262,2.73e-23,13;UBERON:0004786,2.73e-23,13;UBERON:0000160,3.55e-23,31;UBERON:0004923,5.09e-17,24;UBERON:0005409,4.59e-16,47;UBERON:0003350,3.07e-12,9;UBERON:0004808,3.07e-12,9;UBERON:0001277,3.07e-12,9;UBERON:0000331,1.73e-10,3;UBERON:0002116,1.73e-10,3;UBERON:0001204,1.73e-10,3;UBERON:0001168,1.73e-10,3;UBERON:0000485,6.68e-10,11;UBERON:0002108,5.78e-08,4;UBERON:0001155,9.31e-08,2;UBERON:0000059,9.31e-08,2;UBERON:0001962,4.29e-07,2;UBERON:0001961,4.29e-07,2;UBERON:0001744,4.29e-07,2;UBERON:0001007,7.05e-07,116;UBERON:0001555,7.05e-07,116;UBERON:0007026,7.05e-07,116 | |||
|phase1_expression=0,6.2815573375085,4.09499315450582,6.0492842261366,5.00895729946347,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.850432901510698,0,0,3.19984845586813,2.2940928106717,1.14846392823004,1.7230479846363,2.37018355954478,5.13063232532209,4.78857246543868,3.10422714917427,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6996991518442,5.93319817540185,7.8152812644071,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0,4.05810284182349,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.776813650941515,0.742210695324124,0,0,0,0.150722640552623,0,0.125666591329675,0,1.15679485535929,0,0,0.220841518460394,0,3.72783522436244,0,0.209446706813455,9.70736809792647,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0.210289948564127,0,9.58214470653014,2.3800550999719,0,0,0.257734922644187,0,0,0.190225626112559,2.37264530772256,0,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.432276099749388,1.99141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.442830443938806,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0.923765950833023,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.518054945597687,0.578596234326046,3.01582567878545,2.71952841909355,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0.188368457004691,0.27338845544205,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Batf2 | |||
}} |
Revision as of 12:07, 4 August 2015
Short description: | p2@Batf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Batf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000045042_5end |
EntrezGene: | 74481 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.19e-18 | 6 |
gut absorptive cell | 1.19e-18 | 6 |
enterocyte | 1.19e-18 | 6 |
columnar/cuboidal epithelial cell | 6.61e-16 | 7 |
intestinal epithelial cell | 3.07e-12 | 9 |
epithelial cell of alimentary canal | 3.07e-12 | 9 |
epithelial cell | 1.25e-10 | 25 |
bone marrow cell | 1.29e-10 | 3 |
mesenchymal stem cell of the bone marrow | 1.29e-10 | 3 |
defensive cell | 1.74e-10 | 7 |
M cell of gut | 3.30e-09 | 3 |
bone marrow macrophage | 3.46e-07 | 2 |
endo-epithelial cell | 4.30e-07 | 15 |
endodermal cell | 5.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.14e-28 | 15 |
intestinal mucosa | 2.73e-23 | 13 |
wall of intestine | 2.73e-23 | 13 |
gastrointestinal system mucosa | 2.73e-23 | 13 |
intestine | 3.55e-23 | 31 |
organ component layer | 5.09e-17 | 24 |
gastrointestinal system | 4.59e-16 | 47 |
epithelium of mucosa | 3.07e-12 | 9 |
gastrointestinal system epithelium | 3.07e-12 | 9 |
intestinal epithelium | 3.07e-12 | 9 |
ileal mucosa | 1.73e-10 | 3 |
ileum | 1.73e-10 | 3 |
mucosa of small intestine | 1.73e-10 | 3 |
wall of small intestine | 1.73e-10 | 3 |
simple columnar epithelium | 6.68e-10 | 11 |
small intestine | 5.78e-08 | 4 |
colon | 9.31e-08 | 2 |
large intestine | 9.31e-08 | 2 |
gut-associated lymphoid tissue | 4.29e-07 | 2 |
mucosa-associated lymphoid tissue | 4.29e-07 | 2 |
lymphoid tissue | 4.29e-07 | 2 |
digestive system | 7.05e-07 | 116 |
digestive tract | 7.05e-07 | 116 |
primitive gut | 7.05e-07 | 116 |