FFCP PHASE1:Mm9::chr5:67819298..67819334,-: Difference between revisions
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{{FFCP|EntrezGene=666938|HGNC=|MCL_coexpression_id=3525|UniProt=P86174|association_with_transcript=-260bp_to_ENSMUST00000169190,NM_001164806,uc012dws.1_5end|description=CAGE_peak_1_at_Bend4_5end|id=chr5:67819298..67819334,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003133,5.38e-08,24;UBERON:0007100,1.68e-07,18;UBERON:0000948,1.68e-07,18;UBERON:0005498,1.68e-07,18;UBERON:0004140,1.68e-07,18;UBERON:0009881,1.68e-07,18;UBERON:0004141,1.68e-07,18;UBERON:0003084,1.68e-07,18;UBERON:0007005,1.68e-07,18;UBERON:0004139,1.68e-07,18;UBERON:0004291,1.68e-07,18;UBERON:0000991,3.08e-07,18;UBERON:0005564,3.08e-07,18;UBERON:0004176,4.39e-07,17;UBERON:0009196,4.39e-07,17;UBERON:0009117,4.39e-07,17;UBERON:0005156,6.91e-07,26;UBERON:0000990,6.91e-07,26;UBERON:0003135,7.54e-07,15|phase1_expression=0.480446541314382,1.39590163055744,0.909998478779072,0,0,0.503637815735669,0.934450562382103,0,1.40788722151667,0.468129052643987,1.19852577757853,0.159544317990673,0,0,0,0.202475267389826,0,0,0,0,3.06155844543851,6.45391182805754,7.31359409589019,2.71987118748791,2.2940928106717,1.72269589234506,2.15380998079537,0.646413698057667,0,0,0.665191531965914,1.90509202037889,1.84519436275371,0,0,0,0,0,0,0,0,0.683045484958446,0,0.755380907853464,0.709638518536602,0.367093504323363,1.56478268869608,0.65407546914134,0.439372365468944,0.388859798148567,0.419959264876088,0,0,1.45072428402269,17.1407837562657,2.31533492432352,1.43266719969378,3.09403255366465,0.404632921719196,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.898800331555214,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,1.71390590642282,0.662605622854841,0.244981598429908,0.191690942036473,0.919218786610021,1.10115880999389,0.893811366596314,1.0752457327937,0.395658863190582,0.365950574409639,0,0.837548997004143,0.56276261003168,0.916789486660861,1.17851434189467,0.711858403995515,1.67759501242771,0.151452386666368,0.302286240427142,2.89864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.34255163915718,1.8125651855302,0.593768556259299,2.25530924795977,0.608930956624282,1.38369298353635,0.452167921657868,0.940709657085638,0.125666591329675,5.93267922562497,0.289198713839823,1.76922110389975,1.94120219936891,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,4.79260498023681,0.599902730993408,2.54140454146129,0.898743836428936,0,0.125654352112864,0.173824320192276,0,1.0389402227978,0.324482526135515,1.32391173005411,0.373220911830279,1.26361379216837,0.210441855886474,1.43132487258974,0.459804208866946,0.900310649026746,0.60281927134286,0.544291993210623,0.384341160854549,0.0937017245597288,1.03481348295606,2.80238390812695,1.32374256117473,1.40760899331159,0.876782929710299,1.11218899690239,0.696504333044333,0.61734640922383,1.19420560091096,1.40442637462647,0.51469581422943,0.568326998791185,5.17814431338755,4.69052119962192,5.04173772090842,2.3674473558521,5.3126342571799,4.16521204795921,5.34828072925938,4.82892122519315,4.32031766758527,2.30383789878873,2.29834449710733,0.56748166682099,0.146199987425332,0.439100230582101,0.536825675041487,0.210289948564127,0.308713837137853,0,0,1.2797295032114,0.696710015581316,0.515469845288373,0.80673409849337,1.33426826306922,1.52180500890047,0,1.15289268306808,0.754005626400808,1.1937388322469,1.55971269695296,0.898819408654221,0,0,1.70701110857774,1.5994791765362,0,1.83286195060783,0.775809948670503,1.54298803758701,0.252946148497029,0,0.156998727841375,0.123397163921801,0.889357881261447,0.500535317148282,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0.863088412352432,0.810676133875177,0,0,0,0.624075346229121,0.252578877947112,0,0,0,1.13694847062291,1.14075483509418,1.86719594352707,1.64283173801951,2.1775813467436,1.42826184531608,1.17080188714679,0.472905432318573,1.55025282754142,0.159454768657487,0.655453258862952,1.03610989119537,0.578596234326046,1.50791283939272,3.26343410291226,0.491764273019036,1.10374698521893,0.963303539926752,0.703270119553219,0,0,1.89304931649754,0.780877488593277,2.15423397732799,0.955875191810208,0.891194696329576,1.69845918473299,1.21443210502468,0.584511715822624,1.58115111178609,0.321321316421807,2.55492153374884,0.35613120733451,1.95464351224291,0.164970122972535,0,0.728341908464944,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,1.06949213515416,0,0,0,0.340439605753788,1.8006109403131,1.16422815404479,1.71469628025274,1.59606210278046,1.42695054081656,2.46823530903181,0.913394847343798,4.4587624532105,11.6507638975101,0,0.32977250588296,0.968786560175433,0.361877549568935,0.358117032009409,0.164140899745061,0,0.927126510052548,0.341741761595705,1.23832120777933,0.925972636848558,0.188368457004691,0.27338845544205,0,5.26933132980952,2.09927178485487,4.56059913554598,0,0.790839983952838,0.60995840138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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:666938 | |||
|HGNC= | |||
|MCL_coexpression_id=3525 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P86174 | |||
|association_with_transcript=-260bp_to_ENSMUST00000169190,NM_001164806,uc012dws.1_5end | |||
|cluster_id=chr5:67819298..67819334,- | |||
|description=CAGE_peak_1_at_Bend4_5end | |||
|id=chr5:67819298..67819334,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,5.38e-08,24;UBERON:0007100,1.68e-07,18;UBERON:0000948,1.68e-07,18;UBERON:0005498,1.68e-07,18;UBERON:0004140,1.68e-07,18;UBERON:0009881,1.68e-07,18;UBERON:0004141,1.68e-07,18;UBERON:0003084,1.68e-07,18;UBERON:0007005,1.68e-07,18;UBERON:0004139,1.68e-07,18;UBERON:0004291,1.68e-07,18;UBERON:0000991,3.08e-07,18;UBERON:0005564,3.08e-07,18;UBERON:0004176,4.39e-07,17;UBERON:0009196,4.39e-07,17;UBERON:0009117,4.39e-07,17;UBERON:0005156,6.91e-07,26;UBERON:0000990,6.91e-07,26;UBERON:0003135,7.54e-07,15 | |||
|phase1_expression=0.480446541314382,1.39590163055744,0.909998478779072,0,0,0.503637815735669,0.934450562382103,0,1.40788722151667,0.468129052643987,1.19852577757853,0.159544317990673,0,0,0,0.202475267389826,0,0,0,0,3.06155844543851,6.45391182805754,7.31359409589019,2.71987118748791,2.2940928106717,1.72269589234506,2.15380998079537,0.646413698057667,0,0,0.665191531965914,1.90509202037889,1.84519436275371,0,0,0,0,0,0,0,0,0.683045484958446,0,0.755380907853464,0.709638518536602,0.367093504323363,1.56478268869608,0.65407546914134,0.439372365468944,0.388859798148567,0.419959264876088,0,0,1.45072428402269,17.1407837562657,2.31533492432352,1.43266719969378,3.09403255366465,0.404632921719196,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.898800331555214,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,1.71390590642282,0.662605622854841,0.244981598429908,0.191690942036473,0.919218786610021,1.10115880999389,0.893811366596314,1.0752457327937,0.395658863190582,0.365950574409639,0,0.837548997004143,0.56276261003168,0.916789486660861,1.17851434189467,0.711858403995515,1.67759501242771,0.151452386666368,0.302286240427142,2.89864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.34255163915718,1.8125651855302,0.593768556259299,2.25530924795977,0.608930956624282,1.38369298353635,0.452167921657868,0.940709657085638,0.125666591329675,5.93267922562497,0.289198713839823,1.76922110389975,1.94120219936891,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,4.79260498023681,0.599902730993408,2.54140454146129,0.898743836428936,0,0.125654352112864,0.173824320192276,0,1.0389402227978,0.324482526135515,1.32391173005411,0.373220911830279,1.26361379216837,0.210441855886474,1.43132487258974,0.459804208866946,0.900310649026746,0.60281927134286,0.544291993210623,0.384341160854549,0.0937017245597288,1.03481348295606,2.80238390812695,1.32374256117473,1.40760899331159,0.876782929710299,1.11218899690239,0.696504333044333,0.61734640922383,1.19420560091096,1.40442637462647,0.51469581422943,0.568326998791185,5.17814431338755,4.69052119962192,5.04173772090842,2.3674473558521,5.3126342571799,4.16521204795921,5.34828072925938,4.82892122519315,4.32031766758527,2.30383789878873,2.29834449710733,0.56748166682099,0.146199987425332,0.439100230582101,0.536825675041487,0.210289948564127,0.308713837137853,0,0,1.2797295032114,0.696710015581316,0.515469845288373,0.80673409849337,1.33426826306922,1.52180500890047,0,1.15289268306808,0.754005626400808,1.1937388322469,1.55971269695296,0.898819408654221,0,0,1.70701110857774,1.5994791765362,0,1.83286195060783,0.775809948670503,1.54298803758701,0.252946148497029,0,0.156998727841375,0.123397163921801,0.889357881261447,0.500535317148282,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0.863088412352432,0.810676133875177,0,0,0,0.624075346229121,0.252578877947112,0,0,0,1.13694847062291,1.14075483509418,1.86719594352707,1.64283173801951,2.1775813467436,1.42826184531608,1.17080188714679,0.472905432318573,1.55025282754142,0.159454768657487,0.655453258862952,1.03610989119537,0.578596234326046,1.50791283939272,3.26343410291226,0.491764273019036,1.10374698521893,0.963303539926752,0.703270119553219,0,0,1.89304931649754,0.780877488593277,2.15423397732799,0.955875191810208,0.891194696329576,1.69845918473299,1.21443210502468,0.584511715822624,1.58115111178609,0.321321316421807,2.55492153374884,0.35613120733451,1.95464351224291,0.164970122972535,0,0.728341908464944,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,1.06949213515416,0,0,0,0.340439605753788,1.8006109403131,1.16422815404479,1.71469628025274,1.59606210278046,1.42695054081656,2.46823530903181,0.913394847343798,4.4587624532105,11.6507638975101,0,0.32977250588296,0.968786560175433,0.361877549568935,0.358117032009409,0.164140899745061,0,0.927126510052548,0.341741761595705,1.23832120777933,0.925972636848558,0.188368457004691,0.27338845544205,0,5.26933132980952,2.09927178485487,4.56059913554598,0,0.790839983952838,0.609958401380546,0.86404272657441,0.209088296014469,0.655087691238533,0.404593039154462,0.41326727862668,0.523511883968059,0,0,7.89170114157866,1.64468200648377,1.32366792365678,2.91676782516071,1.54991788173277,1.68956125490778,3.0512882047896,2.99470085141085,7.7595914875026,9.66336483304024,8.06484017522023,0.316011120628178,1.01362607645082,0.821687657318618,0.25984164595559,0.716106782669926,0,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,15.0950448294364,16.6867773293625,13.7665385418544,0.772758376128762,0.187682475451182,1.64836461840539,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0,0.93408612825759,0.399024873401031,0.512200817262403,0.729320151204882,1.46729213839588,1.10306105070008,1.77797382241292,1.03017528619447,1.28367683836726,1.26348605881899,1.52087579934144,1.6976370724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| |||
|short_description=p1@Bend4 | |||
}} |
Revision as of 13:40, 4 August 2015
Short description: | p1@Bend4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bend4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3525 |
Association with transcript: | -260bp_to_ENSMUST00000169190, NM_001164806, uc012dws.1_5end |
EntrezGene: | 666938 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 5.38e-08 | 24 |
primary circulatory organ | 1.68e-07 | 18 |
heart | 1.68e-07 | 18 |
primitive heart tube | 1.68e-07 | 18 |
primary heart field | 1.68e-07 | 18 |
anterior lateral plate mesoderm | 1.68e-07 | 18 |
heart tube | 1.68e-07 | 18 |
heart primordium | 1.68e-07 | 18 |
cardiac mesoderm | 1.68e-07 | 18 |
cardiogenic plate | 1.68e-07 | 18 |
heart rudiment | 1.68e-07 | 18 |
gonad | 3.08e-07 | 18 |
gonad primordium | 3.08e-07 | 18 |
external genitalia | 4.39e-07 | 17 |
indifferent external genitalia | 4.39e-07 | 17 |
indifferent gonad | 4.39e-07 | 17 |
reproductive structure | 6.91e-07 | 26 |
reproductive system | 6.91e-07 | 26 |
male reproductive organ | 7.54e-07 | 15 |