FFCP PHASE1:Mm9::chr5:77251518..77251529,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:77251518..77251529,+|id=chr5:77251518..77251529,+|ontology_enrichment_celltype=CL:0000239!3.97e-12!6;CL:0000677!3.97e-12!6;CL:0000212!3.97e-12!6;CL:0000584!3.97e-12!6;CL:0000075!2.89e-10!7;CL:0002563!8.75e-08!9;CL:0002251!8.75e-08!9;CL:0000473!3.24e-07!3;CL:0000627!3.24e-07!3;CL:0000682!3.24e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,7.46e-12,3;CL:0000239,2.00e-10,6;CL:0000677,2.00e-10,6;CL:0000584,2.00e-10,6;CL:0000075,6.06e-09,7;CL:0002563,5.81e-07,9;CL:0002251,5.81e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.57e-27!59;UBERON:0000160!1.88e-23!43;UBERON:0000344!8.01e-18!15;UBERON:0001242!1.49e-14!13;UBERON:0000060!1.49e-14!13;UBERON:0001262!1.49e-14!13;UBERON:0004786!1.49e-14!13;UBERON:0004923!5.27e-10!24;UBERON:0001007!8.32e-10!128;UBERON:0001555!8.32e-10!128;UBERON:0007026!8.32e-10!128;UBERON:0004119!1.58e-09!130;UBERON:0000925!1.58e-09!130;UBERON:0006595!1.58e-09!130;UBERON:0004921!2.31e-08!126;UBERON:0004185!2.31e-08!126;UBERON:0003350!8.75e-08!9;UBERON:0004808!8.75e-08!9;UBERON:0001277!8.75e-08!9;UBERON:0000331!4.68e-07!3;UBERON:0002116!4.68e-07!3;UBERON:0001204!4.68e-07!3;UBERON:0001168!4.68e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.69e-35,31;UBERON:0005409,2.83e-27,47;UBERON:0000344,4.70e-23,15;UBERON:0001242,1.50e-17,13;UBERON:0001262,1.50e-17,13;UBERON:0004786,1.50e-17,13;UBERON:0002108,1.00e-14,4;UBERON:0004923,9.12e-14,24;UBERON:0000331,1.45e-11,3;UBERON:0002116,1.45e-11,3;UBERON:0001204,1.45e-11,3;UBERON:0001168,1.45e-11,3;UBERON:0001007,3.21e-11,116;UBERON:0001555,3.21e-11,116;UBERON:0007026,3.21e-11,116;UBERON:0004119,5.81e-11,118;UBERON:0000925,5.81e-11,118;UBERON:0006595,5.81e-11,118;UBERON:0004921,4.50e-09,114;UBERON:0001962,1.00e-07,2;UBERON:0001961,1.00e-07,2;UBERON:0001744,1.00e-07,2;UBERON:0003350,5.81e-07,9;UBERON:0004808,5.81e-07,9;UBERON:0001277,5.81e-07,9|phase1_expression=0,6.2815573375085,3.18499467572675,4.83942738090928,5.50985302940982,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.60586496747019,5.16808767703518,3.4460959692726,3.66301095566011,3.99049180858385,8.56902441183765,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26046957459495,3.43785736662608,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,2.84717436926707,1.15289268306808,1.50801125280162,1.39269530428806,0.38992817423824,1.79763881730844,4.10662294761919,4.58024928485045,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,1.30877970992015,2.20345454596048,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr5:77251518..77251529,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:77251518..77251529,+ | |||
|description=CAGE_peak_at_chr5:77251518..77251529,+ | |||
|id=chr5:77251518..77251529,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.97e-12!6;CL:0000677!3.97e-12!6;CL:0000212!3.97e-12!6;CL:0000584!3.97e-12!6;CL:0000075!2.89e-10!7;CL:0002563!8.75e-08!9;CL:0002251!8.75e-08!9;CL:0000473!3.24e-07!3;CL:0000627!3.24e-07!3;CL:0000682!3.24e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.46e-12,3;CL:0000239,2.00e-10,6;CL:0000677,2.00e-10,6;CL:0000584,2.00e-10,6;CL:0000075,6.06e-09,7;CL:0002563,5.81e-07,9;CL:0002251,5.81e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.57e-27!59;UBERON:0000160!1.88e-23!43;UBERON:0000344!8.01e-18!15;UBERON:0001242!1.49e-14!13;UBERON:0000060!1.49e-14!13;UBERON:0001262!1.49e-14!13;UBERON:0004786!1.49e-14!13;UBERON:0004923!5.27e-10!24;UBERON:0001007!8.32e-10!128;UBERON:0001555!8.32e-10!128;UBERON:0007026!8.32e-10!128;UBERON:0004119!1.58e-09!130;UBERON:0000925!1.58e-09!130;UBERON:0006595!1.58e-09!130;UBERON:0004921!2.31e-08!126;UBERON:0004185!2.31e-08!126;UBERON:0003350!8.75e-08!9;UBERON:0004808!8.75e-08!9;UBERON:0001277!8.75e-08!9;UBERON:0000331!4.68e-07!3;UBERON:0002116!4.68e-07!3;UBERON:0001204!4.68e-07!3;UBERON:0001168!4.68e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.69e-35,31;UBERON:0005409,2.83e-27,47;UBERON:0000344,4.70e-23,15;UBERON:0001242,1.50e-17,13;UBERON:0001262,1.50e-17,13;UBERON:0004786,1.50e-17,13;UBERON:0002108,1.00e-14,4;UBERON:0004923,9.12e-14,24;UBERON:0000331,1.45e-11,3;UBERON:0002116,1.45e-11,3;UBERON:0001204,1.45e-11,3;UBERON:0001168,1.45e-11,3;UBERON:0001007,3.21e-11,116;UBERON:0001555,3.21e-11,116;UBERON:0007026,3.21e-11,116;UBERON:0004119,5.81e-11,118;UBERON:0000925,5.81e-11,118;UBERON:0006595,5.81e-11,118;UBERON:0004921,4.50e-09,114;UBERON:0001962,1.00e-07,2;UBERON:0001961,1.00e-07,2;UBERON:0001744,1.00e-07,2;UBERON:0003350,5.81e-07,9;UBERON:0004808,5.81e-07,9;UBERON:0001277,5.81e-07,9 | |||
|phase1_expression=0,6.2815573375085,3.18499467572675,4.83942738090928,5.50985302940982,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.60586496747019,5.16808767703518,3.4460959692726,3.66301095566011,3.99049180858385,8.56902441183765,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26046957459495,3.43785736662608,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,2.84717436926707,1.15289268306808,1.50801125280162,1.39269530428806,0.38992817423824,1.79763881730844,4.10662294761919,4.58024928485045,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,1.30877970992015,2.20345454596048,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:77251518..77251529,+ | |||
}} |
Latest revision as of 15:04, 4 August 2015
Short description: | p@chr5:77251518..77251529, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77251518..77251529, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.46e-12 | 3 |
brush border epithelial cell | 2.00e-10 | 6 |
gut absorptive cell | 2.00e-10 | 6 |
enterocyte | 2.00e-10 | 6 |
columnar/cuboidal epithelial cell | 6.06e-09 | 7 |
intestinal epithelial cell | 5.81e-07 | 9 |
epithelial cell of alimentary canal | 5.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.69e-35 | 31 |
gastrointestinal system | 2.83e-27 | 47 |
mucosa | 4.70e-23 | 15 |
intestinal mucosa | 1.50e-17 | 13 |
wall of intestine | 1.50e-17 | 13 |
gastrointestinal system mucosa | 1.50e-17 | 13 |
small intestine | 1.00e-14 | 4 |
organ component layer | 9.12e-14 | 24 |
ileal mucosa | 1.45e-11 | 3 |
ileum | 1.45e-11 | 3 |
mucosa of small intestine | 1.45e-11 | 3 |
wall of small intestine | 1.45e-11 | 3 |
digestive system | 3.21e-11 | 116 |
digestive tract | 3.21e-11 | 116 |
primitive gut | 3.21e-11 | 116 |
endoderm-derived structure | 5.81e-11 | 118 |
endoderm | 5.81e-11 | 118 |
presumptive endoderm | 5.81e-11 | 118 |
subdivision of digestive tract | 4.50e-09 | 114 |
gut-associated lymphoid tissue | 1.00e-07 | 2 |
mucosa-associated lymphoid tissue | 1.00e-07 | 2 |
lymphoid tissue | 1.00e-07 | 2 |
epithelium of mucosa | 5.81e-07 | 9 |
gastrointestinal system epithelium | 5.81e-07 | 9 |
intestinal epithelium | 5.81e-07 | 9 |