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FFCP PHASE1:Mm9::chr10:6806258..6806275,-: Difference between revisions

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{{FFCP|EntrezGene=70337|HGNC=|MCL_coexpression_id=8|UniProt=Q9DCX8|association_with_transcript=0bp_to_NM_027391,uc007ehp.1_5end|description=CAGE_peak_1_at_Iyd_5end|id=chr10:6806258..6806275,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.34e-16!128;UBERON:0001555!3.34e-16!128;UBERON:0007026!3.34e-16!128;UBERON:0004119!1.27e-15!130;UBERON:0000925!1.27e-15!130;UBERON:0006595!1.27e-15!130;UBERON:0004921!2.11e-15!126;UBERON:0004185!2.11e-15!126;UBERON:0009854!8.08e-15!23;UBERON:0009856!8.08e-15!23;UBERON:0002107!2.73e-14!22;UBERON:0007499!2.73e-14!22;UBERON:0006925!2.73e-14!22;UBERON:0009497!2.73e-14!22;UBERON:0000015!2.73e-14!22;UBERON:0002423!2.73e-14!22;UBERON:0006235!2.73e-14!22;UBERON:0008835!2.73e-14!22;UBERON:0003894!2.73e-14!22;UBERON:0004161!2.73e-14!22;UBERON:0008836!2.73e-14!22;UBERON:0005409!7.00e-13!59;UBERON:0005172!1.25e-12!49;UBERON:0005173!1.25e-12!49;UBERON:0002417!1.25e-12!49;UBERON:0000916!1.25e-12!49;UBERON:0005177!1.38e-12!85;UBERON:0009569!3.65e-12!66;UBERON:0000160!8.65e-12!43;UBERON:0002365!7.65e-11!25;UBERON:0002330!7.65e-11!25;UBERON:0001041!3.27e-08!92;UBERON:0002100!5.44e-08!98;UBERON:0000466!1.62e-07!79;UBERON:0000481!3.40e-07!230;UBERON:0005911!3.49e-07!69;UBERON:0003104!4.01e-07!131;UBERON:0009142!4.01e-07!131;UBERON:0000077!5.37e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.13e-17,23;UBERON:0009856,1.13e-17,23;UBERON:0002107,4.99e-17,22;UBERON:0007499,4.99e-17,22;UBERON:0006925,4.99e-17,22;UBERON:0009497,4.99e-17,22;UBERON:0000015,4.99e-17,22;UBERON:0002423,4.99e-17,22;UBERON:0006235,4.99e-17,22;UBERON:0008835,4.99e-17,22;UBERON:0003894,4.99e-17,22;UBERON:0004161,4.99e-17,22;UBERON:0008836,4.99e-17,22;UBERON:0005177,2.31e-15,79;UBERON:0002365,1.02e-13,25;UBERON:0002330,1.02e-13,25;UBERON:0001007,1.16e-13,116;UBERON:0001555,1.16e-13,116;UBERON:0007026,1.16e-13,116;UBERON:0004119,5.26e-13,118;UBERON:0000925,5.26e-13,118;UBERON:0006595,5.26e-13,118;UBERON:0004921,7.77e-13,114;UBERON:0005172,1.73e-12,49;UBERON:0005173,1.73e-12,49;UBERON:0002417,1.73e-12,49;UBERON:0000916,1.73e-12,49;UBERON:0009569,3.99e-12,66;UBERON:0002100,5.23e-11,90;UBERON:0005409,3.72e-10,47;UBERON:0000160,2.10e-09,31;UBERON:0003104,5.45e-08,61;UBERON:0009142,5.45e-08,61;UBERON:0005911,1.76e-07,69|phase1_expression=3.52327463630547,3.83872948403297,4.09499315450582,16.6355316218757,14.5259761684441,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7154545590348,0,0,7.1996590257033,4.12936705920906,2.8711598205751,1.7230479846363,2.15471232685889,25.4631382071541,10.3332353201572,0.665191531965914,0,0,0,4.33277429626912,1.32987716286794,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,1.10115880999389,3.57524546638526,4.30098293117482,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,5.79728977403356,130.784429301171,115.595126730318,135.465501101092,222.223534767103,228.045685532544,63.9022111599471,0,0,0,0.14084341977668,0,0,0,0,0,0,96.2570106031676,0,0.890652834388949,0.693941307064543,2.13125834818499,2.07553947530453,1.65794904607885,0.940709657085638,1.88499886994513,0,0.289198713839823,0,0.323533699894818,0,0,16.775258509631,0,0.209446706813455,25.5457055208591,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0.255715457330331,5.61027720310812,1.46017136760982,0.611036183101898,1.8661045591514,4.80173241023982,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0.204109497453984,0.512454881139399,0.655912071918102,1.29351685369508,0,0,0,0.43839146485515,0.834141747676794,2.43776516565517,2.46938563689532,0.398068533636986,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0,0,0.268412837520744,1.68231958851302,0.205809224758569,101.108147593042,12.164726066523,0,0,0.902072229254653,2.21851877085677,4.22518283305254,4.1849637744763,22.302865892592,2.79988223030818,4.27269854960458,3.78017296878187,3.11942539390592,19.7740269903929,17.7233200897249,30.6677560811725,1.70701110857774,0.913988100877831,3.38123207019241,3.86937522906097,4.84881217919064,8.20589092716727,14.4811670014549,36.4597065509617,47.2566170802538,51.8268088471562,143.48307151018,2.66952169145751,3.93117990226406,6.2961391467759,10.3458661908136,22.1882986972223,21.3885715496393,33.9481442191957,33.2377214888823,92.8017576575715,126.516021744072,136.575727794341,148.841970075645,135.634857457599,162.354659237331,260.519501536218,4.43407656399851,0.568474235311454,0,0.848725428875941,1.87752198630802,2.84760637651087,4.28478553594825,3.31727201358258,2.36452716159286,1.10732344824387,2.07291199254733,1.96635977658886,3.45369963731791,4.19482269886384,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0.28307653078883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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:70337
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:Q9DCX8
|association_with_transcript=0bp_to_NM_027391,uc007ehp.1_5end
|cluster_id=chr10:6806258..6806275,-
|description=CAGE_peak_1_at_Iyd_5end
|id=chr10:6806258..6806275,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.34e-16!128;UBERON:0001555!3.34e-16!128;UBERON:0007026!3.34e-16!128;UBERON:0004119!1.27e-15!130;UBERON:0000925!1.27e-15!130;UBERON:0006595!1.27e-15!130;UBERON:0004921!2.11e-15!126;UBERON:0004185!2.11e-15!126;UBERON:0009854!8.08e-15!23;UBERON:0009856!8.08e-15!23;UBERON:0002107!2.73e-14!22;UBERON:0007499!2.73e-14!22;UBERON:0006925!2.73e-14!22;UBERON:0009497!2.73e-14!22;UBERON:0000015!2.73e-14!22;UBERON:0002423!2.73e-14!22;UBERON:0006235!2.73e-14!22;UBERON:0008835!2.73e-14!22;UBERON:0003894!2.73e-14!22;UBERON:0004161!2.73e-14!22;UBERON:0008836!2.73e-14!22;UBERON:0005409!7.00e-13!59;UBERON:0005172!1.25e-12!49;UBERON:0005173!1.25e-12!49;UBERON:0002417!1.25e-12!49;UBERON:0000916!1.25e-12!49;UBERON:0005177!1.38e-12!85;UBERON:0009569!3.65e-12!66;UBERON:0000160!8.65e-12!43;UBERON:0002365!7.65e-11!25;UBERON:0002330!7.65e-11!25;UBERON:0001041!3.27e-08!92;UBERON:0002100!5.44e-08!98;UBERON:0000466!1.62e-07!79;UBERON:0000481!3.40e-07!230;UBERON:0005911!3.49e-07!69;UBERON:0003104!4.01e-07!131;UBERON:0009142!4.01e-07!131;UBERON:0000077!5.37e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.13e-17,23;UBERON:0009856,1.13e-17,23;UBERON:0002107,4.99e-17,22;UBERON:0007499,4.99e-17,22;UBERON:0006925,4.99e-17,22;UBERON:0009497,4.99e-17,22;UBERON:0000015,4.99e-17,22;UBERON:0002423,4.99e-17,22;UBERON:0006235,4.99e-17,22;UBERON:0008835,4.99e-17,22;UBERON:0003894,4.99e-17,22;UBERON:0004161,4.99e-17,22;UBERON:0008836,4.99e-17,22;UBERON:0005177,2.31e-15,79;UBERON:0002365,1.02e-13,25;UBERON:0002330,1.02e-13,25;UBERON:0001007,1.16e-13,116;UBERON:0001555,1.16e-13,116;UBERON:0007026,1.16e-13,116;UBERON:0004119,5.26e-13,118;UBERON:0000925,5.26e-13,118;UBERON:0006595,5.26e-13,118;UBERON:0004921,7.77e-13,114;UBERON:0005172,1.73e-12,49;UBERON:0005173,1.73e-12,49;UBERON:0002417,1.73e-12,49;UBERON:0000916,1.73e-12,49;UBERON:0009569,3.99e-12,66;UBERON:0002100,5.23e-11,90;UBERON:0005409,3.72e-10,47;UBERON:0000160,2.10e-09,31;UBERON:0003104,5.45e-08,61;UBERON:0009142,5.45e-08,61;UBERON:0005911,1.76e-07,69
|phase1_expression=3.52327463630547,3.83872948403297,4.09499315450582,16.6355316218757,14.5259761684441,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7154545590348,0,0,7.1996590257033,4.12936705920906,2.8711598205751,1.7230479846363,2.15471232685889,25.4631382071541,10.3332353201572,0.665191531965914,0,0,0,4.33277429626912,1.32987716286794,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,1.10115880999389,3.57524546638526,4.30098293117482,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,5.79728977403356,130.784429301171,115.595126730318,135.465501101092,222.223534767103,228.045685532544,63.9022111599471,0,0,0,0.14084341977668,0,0,0,0,0,0,96.2570106031676,0,0.890652834388949,0.693941307064543,2.13125834818499,2.07553947530453,1.65794904607885,0.940709657085638,1.88499886994513,0,0.289198713839823,0,0.323533699894818,0,0,16.775258509631,0,0.209446706813455,25.5457055208591,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0.255715457330331,5.61027720310812,1.46017136760982,0.611036183101898,1.8661045591514,4.80173241023982,0.210441855886474,0.130120442962704,0,0,0.753524089178575,0.204109497453984,0.512454881139399,0.655912071918102,1.29351685369508,0,0,0,0.43839146485515,0.834141747676794,2.43776516565517,2.46938563689532,0.398068533636986,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0,0,0.268412837520744,1.68231958851302,0.205809224758569,101.108147593042,12.164726066523,0,0,0.902072229254653,2.21851877085677,4.22518283305254,4.1849637744763,22.302865892592,2.79988223030818,4.27269854960458,3.78017296878187,3.11942539390592,19.7740269903929,17.7233200897249,30.6677560811725,1.70701110857774,0.913988100877831,3.38123207019241,3.86937522906097,4.84881217919064,8.20589092716727,14.4811670014549,36.4597065509617,47.2566170802538,51.8268088471562,143.48307151018,2.66952169145751,3.93117990226406,6.2961391467759,10.3458661908136,22.1882986972223,21.3885715496393,33.9481442191957,33.2377214888823,92.8017576575715,126.516021744072,136.575727794341,148.841970075645,135.634857457599,162.354659237331,260.519501536218,4.43407656399851,0.568474235311454,0,0.848725428875941,1.87752198630802,2.84760637651087,4.28478553594825,3.31727201358258,2.36452716159286,1.10732344824387,2.07291199254733,1.96635977658886,3.45369963731791,4.19482269886384,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.712262414669021,0.488660878060728,0,17.2568679841952,1.21390318077491,0.604647113929502,3.39489143560617,2.06711325016541,3.99665692327106,3.10113951801865,3.63533729477506,11.0514187299264,17.0659849285341,13.7044191147498,11.3449097573006,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.784068024066026,0.835606408021955,0.492422699235184,12.8251568117134,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,38.1868247206045,0.949007980743406,2.84647253977588,5.07625101862466,9.40897332065109,13.3201163885168,24.2755823492677,30.499125162649,31.9342249220516,5.18459893167171,0,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0,2.8644964665669,0,0,0,0.316011120628178,1.01362607645082,1.23253148597793,0,0.537080087002444,0.993406773906324,0.841368146639782,0,0.201932899896295,0.228620419965,0.302478555410522,0.38983152295901,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0.682934423016537,3.64660075602441,0.838452650511929,1.65459157605013,5.11167473943715,4.94484137373346,3.20919209591815,3.53776096469316,4.05566879824384,2.82939512079114,4.02658482120494,3.39333307745807,3.61843454420364,1.90517476513229,3.36064545240081,3.8581844092741,4.53294490883637,5.7407578852415,2.40008476669791,4.96932257246145,5.00715998889374,4.21504608233753,4.32903149910521,3.38458431566706,3.65855945745545,3.6829759601298,3.12349461845482,5.05028044491965,3.32178050747688,3.74317033027141,2.86461730218783,3.40861050609125,2.89359916471712,0.499621155875892,3.74290573512653,2.57845264857958,0.191288332068843,1.98532277207564,0.231867835620421
|short_description=p1@Iyd
}}

Revision as of 15:18, 4 August 2015

Short description:p1@Iyd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Iyd_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_NM_027391, uc007ehp.1_5end
EntrezGene:70337
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Iyd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B925.46
Ileum epithelium, pool2.CNhs13232.10253-104C110.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7130.78
Mouse hepatocyte, donor1.CNhs13078.11714-123C4115.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C8135.47
Mouse hepatocyte, donor6.CNhs13090.11822-124F4222.22
Mouse hepatocyte, donor8.CNhs13091.11824-124F6228.05
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A763.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B696.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H725.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I3101.11
intestine, adult.CNhs10496.178-9A312.16
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D122.30
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E317.72
intestine, neonate N30.CNhs11131.1384-42G130.67
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G78.21
kidney, neonate N10.CNhs11206.758-6D514.48
kidney, neonate N20.CNhs11113.832-19I136.46
kidney, neonate N25.CNhs11122.1353-25F347.26
kidney, neonate N30.CNhs11203.1385-42H151.83
liver, adult pregnant day01.CNhs10466.508-5B2143.48
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D710.35
liver, embryo E16.CNhs10523.462-17F522.19
liver, embryo E17.CNhs10510.481-18A321.39
liver, embryo E18.CNhs10579.499-43G433.95
liver, neonate N00.CNhs11117.641-24F433.24
liver, neonate N03.CNhs11123.1345-25G292.80
liver, neonate N06.CNhs11101.684-20A8126.52
liver, neonate N07.CNhs11103.716-20H2136.58
liver, neonate N10.CNhs11115.751-24B9148.84
liver, neonate N20.CNhs11220.823-25A3135.63
liver, neonate N25.CNhs11198.1368-26H1162.35
liver, neonate N30.CNhs11106.1382-42D1260.52
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B617.07
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I112.83
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D59.41
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B824.28
stomach, neonate N07.CNhs11210.718-18A930.50
stomach, neonate N25.CNhs11104.1355-25E431.93
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum1.13e-1723
sac1.13e-1723
liver4.99e-1722
epithelial sac4.99e-1722
digestive gland4.99e-1722
epithelium of foregut-midgut junction4.99e-1722
anatomical boundary4.99e-1722
hepatobiliary system4.99e-1722
foregut-midgut junction4.99e-1722
hepatic diverticulum4.99e-1722
liver primordium4.99e-1722
septum transversum4.99e-1722
liver bud4.99e-1722
trunk region element2.31e-1579
exocrine gland1.02e-1325
exocrine system1.02e-1325
digestive system1.16e-13116
digestive tract1.16e-13116
primitive gut1.16e-13116
endoderm-derived structure5.26e-13118
endoderm5.26e-13118
presumptive endoderm5.26e-13118
subdivision of digestive tract7.77e-13114
abdomen element1.73e-1249
abdominal segment element1.73e-1249
abdominal segment of trunk1.73e-1249
abdomen1.73e-1249
subdivision of trunk3.99e-1266
trunk5.23e-1190
gastrointestinal system3.72e-1047
intestine2.10e-0931
mesenchyme5.45e-0861
entire embryonic mesenchyme5.45e-0861
endo-epithelium1.76e-0769
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