FFCP PHASE1:Mm9::chr10:77867856..77867866,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=438|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:77867856..77867866,-|id=chr10:77867856..77867866,-|ontology_enrichment_celltype=CL:0000117!8.27e-14!23;CL:0000337!8.27e-14!23;CL:0002319!6.06e-11!43;CL:0000221!1.54e-10!44;CL:0000133!1.54e-10!44;CL:0000540!3.15e-09!33;CL:0000047!3.15e-09!33;CL:0000031!3.15e-09!33;CL:0000404!3.15e-09!33;CL:0000055!1.80e-08!50;CL:0000393!5.04e-07!39;CL:0000211!5.04e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,1.17e-38,3;CL:0000117,7.69e-20,23;CL:0000337,7.69e-20,23;CL:0002612,1.93e-17,3;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0000540,6.41e-14,33;CL:0000047,6.41e-14,33;CL:0000031,6.41e-14,33;CL:0000404,6.41e-14,33;CL:0000393,8.16e-12,39;CL:0000211,8.16e-12,39;CL:0002321,6.38e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.24e-08!75;UBERON:0001016!1.24e-08!75;UBERON:0001017!1.94e-08!73;UBERON:0005743!1.94e-08!73;UBERON:0002616!3.04e-07!49;UBERON:0002020!4.22e-07!34;UBERON:0001049!4.73e-07!52;UBERON:0005068!4.73e-07!52;UBERON:0006241!4.73e-07!52;UBERON:0007135!4.73e-07!52;UBERON:0000955!5.54e-07!50;UBERON:0006238!5.54e-07!50;UBERON:0000033!5.84e-07!63;UBERON:0004121!7.10e-07!102;UBERON:0000924!7.10e-07!102;UBERON:0006601!7.10e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.17e-38,3;UBERON:0002275,1.17e-38,3;UBERON:0002257,1.93e-17,3;UBERON:0001948,7.03e-11,5;UBERON:0002315,7.03e-11,5;UBERON:0002240,3.15e-09,6;UBERON:0005174,3.15e-09,6;UBERON:0001137,3.15e-09,6;UBERON:0000073,1.40e-08,54;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,0,0.220868540951614,0.122490799214954,0.191690942036473,0,2.20231761998777,1.91531007127782,3.07213066512487,0.263772575460388,0.274462930807229,1.56274011167028,0,0.56276261003168,0.15279824777681,1.47314292736834,1.56608848879013,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0.767146371990992,0.20778804455956,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.536546802799238,0,0.329119699826961,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr10:77867856..77867866,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:77867856..77867866,- | |||
|description=CAGE_peak_at_chr10:77867856..77867866,- | |||
|id=chr10:77867856..77867866,- | |||
|ontology_enrichment_celltype=CL:0000117!8.27e-14!23;CL:0000337!8.27e-14!23;CL:0002319!6.06e-11!43;CL:0000221!1.54e-10!44;CL:0000133!1.54e-10!44;CL:0000540!3.15e-09!33;CL:0000047!3.15e-09!33;CL:0000031!3.15e-09!33;CL:0000404!3.15e-09!33;CL:0000055!1.80e-08!50;CL:0000393!5.04e-07!39;CL:0000211!5.04e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.17e-38,3;CL:0000117,7.69e-20,23;CL:0000337,7.69e-20,23;CL:0002612,1.93e-17,3;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0000540,6.41e-14,33;CL:0000047,6.41e-14,33;CL:0000031,6.41e-14,33;CL:0000404,6.41e-14,33;CL:0000393,8.16e-12,39;CL:0000211,8.16e-12,39;CL:0002321,6.38e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.24e-08!75;UBERON:0001016!1.24e-08!75;UBERON:0001017!1.94e-08!73;UBERON:0005743!1.94e-08!73;UBERON:0002616!3.04e-07!49;UBERON:0002020!4.22e-07!34;UBERON:0001049!4.73e-07!52;UBERON:0005068!4.73e-07!52;UBERON:0006241!4.73e-07!52;UBERON:0007135!4.73e-07!52;UBERON:0000955!5.54e-07!50;UBERON:0006238!5.54e-07!50;UBERON:0000033!5.84e-07!63;UBERON:0004121!7.10e-07!102;UBERON:0000924!7.10e-07!102;UBERON:0006601!7.10e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.17e-38,3;UBERON:0002275,1.17e-38,3;UBERON:0002257,1.93e-17,3;UBERON:0001948,7.03e-11,5;UBERON:0002315,7.03e-11,5;UBERON:0002240,3.15e-09,6;UBERON:0005174,3.15e-09,6;UBERON:0001137,3.15e-09,6;UBERON:0000073,1.40e-08,54;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0.420649922702764,0,0.220868540951614,0.122490799214954,0.191690942036473,0,2.20231761998777,1.91531007127782,3.07213066512487,0.263772575460388,0.274462930807229,1.56274011167028,0,0.56276261003168,0.15279824777681,1.47314292736834,1.56608848879013,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0.767146371990992,0.20778804455956,0,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.536546802799238,0,0.329119699826961,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr10:77867856..77867866,- | |||
}} |
Latest revision as of 18:18, 4 August 2015
Short description: | p@chr10:77867856..77867866, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:77867856..77867866, - |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.17e-38 | 3 |
CNS neuron (sensu Vertebrata) | 7.69e-20 | 23 |
neuroblast (sensu Vertebrata) | 7.69e-20 | 23 |
neuron of the ventral spinal cord | 1.93e-17 | 3 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
neuron | 6.41e-14 | 33 |
neuronal stem cell | 6.41e-14 | 33 |
neuroblast | 6.41e-14 | 33 |
electrically signaling cell | 6.41e-14 | 33 |
electrically responsive cell | 8.16e-12 | 39 |
electrically active cell | 8.16e-12 | 39 |
embryonic cell | 6.38e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.17e-38 | 3 |
reticular formation | 1.17e-38 | 3 |
ventral horn of spinal cord | 1.93e-17 | 3 |
regional part of spinal cord | 7.03e-11 | 5 |
gray matter of spinal cord | 7.03e-11 | 5 |
spinal cord | 3.15e-09 | 6 |
dorsal region element | 3.15e-09 | 6 |
dorsum | 3.15e-09 | 6 |
regional part of nervous system | 1.40e-08 | 54 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |