Personal tools

FFCP PHASE1:Mm9::chr9:123883438..123883465,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=12768|HGNC=|MCL_coexpression_id=3|UniProt=P51675,Q8BMH9,Q8BVW4|association_with_transcript=59bp_to_ENSMUST00000026911,NM_009912,uc009sgy.2_5end|description=CAGE_peak_4_at_Ccr1_5end|id=chr9:123883438..123883465,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.41e-08,3;DOID:4045,8.41e-08,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.41e-09,32;UBERON:0000981,2.62e-09,4;UBERON:0003608,2.62e-09,4;UBERON:0003826,2.62e-09,4;UBERON:0008202,2.62e-09,4;UBERON:0004381,2.62e-09,4;UBERON:0007273,2.62e-09,4;UBERON:0010912,2.62e-09,4;UBERON:0002513,2.62e-09,4;UBERON:0004375,2.62e-09,4;UBERON:0010740,2.62e-09,4;UBERON:0010363,2.62e-09,4;UBERON:0003860,2.62e-09,4;UBERON:0002428,2.62e-09,4;UBERON:0010742,2.62e-09,4;UBERON:0002495,2.62e-09,4;UBERON:0003464,2.62e-09,4;UBERON:0003606,2.62e-09,4;UBERON:0005893,2.62e-09,4;UBERON:0009749,2.62e-09,4;UBERON:0010712,2.62e-09,4;UBERON:0010886,2.62e-09,4;UBERON:0005254,2.62e-09,4;UBERON:0010885,2.62e-09,4;UBERON:0010881,2.62e-09,4;UBERON:0010882,2.62e-09,4;UBERON:0007844,2.62e-09,4;UBERON:0001441,2.62e-09,4;UBERON:0011249,2.62e-09,4;UBERON:0002091,2.62e-09,4;UBERON:0003285,2.62e-09,4;UBERON:0004288,2.62e-09,4;UBERON:0010129,2.62e-09,4;UBERON:0006234,2.62e-09,4;UBERON:0005418,2.06e-07,5;UBERON:0002472,2.06e-07,5;UBERON:0008784,2.06e-07,5;UBERON:0006058,2.06e-07,5;UBERON:0004709,2.06e-07,5;UBERON:0002529,2.06e-07,5;UBERON:0010538,2.06e-07,5;UBERON:0005420,2.06e-07,5;UBERON:0010758,2.06e-07,5;UBERON:0000978,2.06e-07,5;UBERON:0002103,2.06e-07,5;UBERON:0000376,2.06e-07,5;UBERON:0000154,2.06e-07,5;UBERON:0010709,2.06e-07,5;UBERON:0005730,2.06e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0.473193248037357,0,0,0.340173160604279,0.794327609607082,0,1.11994695955385,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,101.703186269069,67.9761749735706,63.8698967648034,80.587713860249,80.5993672250966,46.6089938909907,0,0,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,1.02903774414379,0.573066879877513,2.06268836910977,0,0,0,0,0,1.3498495759221,1.97773272513395,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.571301968807607,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.427115042397309,0,1.28734528666413,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0.251333182659351,0.247194967734374,0.433798070759735,3.5384422077995,4.20593809863264,4.41683036920787,6.78825354389311,0,0,0,0.510914110417183,0.239630249011841,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0.712875546952214,5.47390670684409,0.252722758433675,0,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0.512454881139399,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0.834141747676794,0.348252166522167,1.23469281844766,0,1.40442637462647,1.02939162845886,0.284163499395593,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0,0.656669856316381,0.729619285912702,0,0.439100230582101,0.402619256281115,0,0.102904612379284,0,0.528901133327089,0,0.232236671860439,0.515469845288373,0,0,0,0,1.31759163779209,0.754005626400808,0.397912944082302,1.16978452271472,0.898819408654221,0.432276099749388,0.796565093017469,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0,0,0,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,1.66277871149944,0.37898282354097,0.325929952884052,0.339490171550376,0.938760993154008,0.502518772325447,0.476087281772027,0.780534591431195,1.57635144106191,0.8858587585951,0.797273843287435,0.81931657357869,1.55416483679306,0.867894351489069,0,0.54390568381871,0,0.551873492609465,0,0.35163505977661,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.885905678642318,0.922305443831782,0.775284879504663,1.45413491791002,1.06949213515416,0.316036757935816,2.10837217149998,0,0,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0,0.854354403989263,1.857481811669,4.62986318424279,0.753473828018764,0.27338845544205,0,0,1.11961161858926,0.414599921413271,0,0.158167996790568,0.609958401380546,0.540026704109006,0.627264888043406,0.436725127492355,0.539457385539283,0.41326727862668,0,0.777689839750757,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.516639293910924,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0,0,0,0.308132871494482,0.129920822977795,0.716106782669926,0.596044064343795,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.13365191807606,0,0,0,0.386379188064381,0,0.183151624267265,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.655490552289177,0.384150914429216,0.402048282689293,0,0.579421629724277,1.54327376370964,1.23625770240992,0.883193520806384,1.37147700954166,0.70990322463735,1.1921809497366,0.290692833264657,0.376437521661322,1.01537529470012,0.548783918618318,0.526139422875686,0.814824683075171,0,0.711810108745045,0.394017929502254,0,0.619747364743864,0.771626443924566,0.749431733813838,0.935726433781634,1.93383948643468,2.29545998482612,1.32354851471709,3.01428186306548|short_description=p4@Ccr1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12768
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=uniprot:P51675,uniprot:Q8BMH9,uniprot:Q8BVW4
|association_with_transcript=59bp_to_ENSMUST00000026911,NM_009912,uc009sgy.2_5end
|cluster_id=chr9:123883438..123883465,-
|description=CAGE_peak_4_at_Ccr1_5end
|id=chr9:123883438..123883465,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,8.41e-08,3;DOID:4045,8.41e-08,3
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.41e-09,32;UBERON:0000981,2.62e-09,4;UBERON:0003608,2.62e-09,4;UBERON:0003826,2.62e-09,4;UBERON:0008202,2.62e-09,4;UBERON:0004381,2.62e-09,4;UBERON:0007273,2.62e-09,4;UBERON:0010912,2.62e-09,4;UBERON:0002513,2.62e-09,4;UBERON:0004375,2.62e-09,4;UBERON:0010740,2.62e-09,4;UBERON:0010363,2.62e-09,4;UBERON:0003860,2.62e-09,4;UBERON:0002428,2.62e-09,4;UBERON:0010742,2.62e-09,4;UBERON:0002495,2.62e-09,4;UBERON:0003464,2.62e-09,4;UBERON:0003606,2.62e-09,4;UBERON:0005893,2.62e-09,4;UBERON:0009749,2.62e-09,4;UBERON:0010712,2.62e-09,4;UBERON:0010886,2.62e-09,4;UBERON:0005254,2.62e-09,4;UBERON:0010885,2.62e-09,4;UBERON:0010881,2.62e-09,4;UBERON:0010882,2.62e-09,4;UBERON:0007844,2.62e-09,4;UBERON:0001441,2.62e-09,4;UBERON:0011249,2.62e-09,4;UBERON:0002091,2.62e-09,4;UBERON:0003285,2.62e-09,4;UBERON:0004288,2.62e-09,4;UBERON:0010129,2.62e-09,4;UBERON:0006234,2.62e-09,4;UBERON:0005418,2.06e-07,5;UBERON:0002472,2.06e-07,5;UBERON:0008784,2.06e-07,5;UBERON:0006058,2.06e-07,5;UBERON:0004709,2.06e-07,5;UBERON:0002529,2.06e-07,5;UBERON:0010538,2.06e-07,5;UBERON:0005420,2.06e-07,5;UBERON:0010758,2.06e-07,5;UBERON:0000978,2.06e-07,5;UBERON:0002103,2.06e-07,5;UBERON:0000376,2.06e-07,5;UBERON:0000154,2.06e-07,5;UBERON:0010709,2.06e-07,5;UBERON:0005730,2.06e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0.473193248037357,0,0,0.340173160604279,0.794327609607082,0,1.11994695955385,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,101.703186269069,67.9761749735706,63.8698967648034,80.587713860249,80.5993672250966,46.6089938909907,0,0,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,1.02903774414379,0.573066879877513,2.06268836910977,0,0,0,0,0,1.3498495759221,1.97773272513395,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.571301968807607,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.427115042397309,0,1.28734528666413,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.432982082022428,0,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0.251333182659351,0.247194967734374,0.433798070759735,3.5384422077995,4.20593809863264,4.41683036920787,6.78825354389311,0,0,0,0.510914110417183,0.239630249011841,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0.712875546952214,5.47390670684409,0.252722758433675,0,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0.512454881139399,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0.834141747676794,0.348252166522167,1.23469281844766,0,1.40442637462647,1.02939162845886,0.284163499395593,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0,0.656669856316381,0.729619285912702,0,0.439100230582101,0.402619256281115,0,0.102904612379284,0,0.528901133327089,0,0.232236671860439,0.515469845288373,0,0,0,0,1.31759163779209,0.754005626400808,0.397912944082302,1.16978452271472,0.898819408654221,0.432276099749388,0.796565093017469,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0,0,0,0.333690211432188,0.589676985339609,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.810676133875177,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,1.66277871149944,0.37898282354097,0.325929952884052,0.339490171550376,0.938760993154008,0.502518772325447,0.476087281772027,0.780534591431195,1.57635144106191,0.8858587585951,0.797273843287435,0.81931657357869,1.55416483679306,0.867894351489069,0,0.54390568381871,0,0.551873492609465,0,0.35163505977661,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.885905678642318,0.922305443831782,0.775284879504663,1.45413491791002,1.06949213515416,0.316036757935816,2.10837217149998,0,0,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0,0.854354403989263,1.857481811669,4.62986318424279,0.753473828018764,0.27338845544205,0,0,1.11961161858926,0.414599921413271,0,0.158167996790568,0.609958401380546,0.540026704109006,0.627264888043406,0.436725127492355,0.539457385539283,0.41326727862668,0,0.777689839750757,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.516639293910924,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0,0,0,0.308132871494482,0.129920822977795,0.716106782669926,0.596044064343795,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.13365191807606,0,0,0,0.386379188064381,0,0.183151624267265,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.655490552289177,0.384150914429216,0.402048282689293,0,0.579421629724277,1.54327376370964,1.23625770240992,0.883193520806384,1.37147700954166,0.70990322463735,1.1921809497366,0.290692833264657,0.376437521661322,1.01537529470012,0.548783918618318,0.526139422875686,0.814824683075171,0,0.711810108745045,0.394017929502254,0,0.619747364743864,0.771626443924566,0.749431733813838,0.935726433781634,1.93383948643468,2.29545998482612,1.32354851471709,3.01428186306548
|short_description=p4@Ccr1
}}

Revision as of 19:44, 4 August 2015

Short description:p4@Ccr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ccr1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 59bp_to_ENSMUST00000026911, NM_009912, uc009sgy.2_5end
EntrezGene:12768
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ccr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8101.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H167.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H363.87
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G980.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H280.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H446.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
musculoskeletal system1.41e-0932
femur2.62e-094
hindlimb long bone2.62e-094
upper leg bone2.62e-094
bone of hip region2.62e-094
skeleton of limb2.62e-094
pelvic appendage skeleton2.62e-094
subdivision of skeleton2.62e-094
endochondral bone2.62e-094
bone of free limb or fin2.62e-094
bone of appendage girdle complex2.62e-094
endochondral element2.62e-094
hindlimb mesenchyme2.62e-094
limb bone2.62e-094
bone of pelvic complex2.62e-094
long bone2.62e-094
hindlimb bone2.62e-094
limb long bone2.62e-094
leg bone2.62e-094
limb mesenchyme2.62e-094
limb skeleton subdivision2.62e-094
hindlimb bone pre-cartilage condensation2.62e-094
upper leg mesenchyme2.62e-094
hindlimb cartilage element2.62e-094
limb cartilage element2.62e-094
limb bone pre-cartilage condensation2.62e-094
cartilage element2.62e-094
hindlimb skeleton2.62e-094
appendicular skeletal system2.62e-094
appendicular skeleton2.62e-094
limb of embryo2.62e-094
skeleton2.62e-094
femur cartilage element2.62e-094
femur pre-cartilage condensation2.62e-094
hindlimb bud2.06e-075
stylopod2.06e-075
lower limb segment2.06e-075
multi-limb segment region2.06e-075
pelvic appendage2.06e-075
limb segment2.06e-075
paired limb/fin segment2.06e-075
pelvic appendage bud2.06e-075
subdivision of organism along appendicular axis2.06e-075
leg2.06e-075
hindlimb2.06e-075
hindlimb stylopod2.06e-075
posterior region of body2.06e-075
pelvic complex2.06e-075
hindlimb/pelvic fin field2.06e-075

Disease
Ontology termp-valuen
musculoskeletal system cancer8.41e-083
muscle cancer8.41e-083
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:123883438..123883465,-&oldid=3815157"