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FFCP PHASE1:Mm9::chr12:17999666..17999694,+: Difference between revisions

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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=2775|UniProt=|association_with_transcript=0bp_to_uc007nda.1_5end|description=CAGE_peak_1_at_uc007nda.1_5end|id=chr12:17999666..17999694,+|ontology_enrichment_celltype=CL:0000540!9.57e-21!33;CL:0000047!9.57e-21!33;CL:0000031!9.57e-21!33;CL:0000404!9.57e-21!33;CL:0000221!6.36e-18!44;CL:0000133!6.36e-18!44;CL:0002319!1.59e-17!43;CL:0000393!7.40e-17!39;CL:0000211!7.40e-17!39;CL:0000117!6.55e-15!23;CL:0000337!6.55e-15!23;CL:0000055!5.90e-14!50;CL:0000107!5.42e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.50e-23,33;CL:0000047,1.50e-23,33;CL:0000031,1.50e-23,33;CL:0000404,1.50e-23,33;CL:0000393,5.99e-20,39;CL:0000211,5.99e-20,39;CL:0000221,6.39e-19,44;CL:0000133,6.39e-19,44;CL:0002319,1.81e-18,43;CL:0000117,7.38e-17,23;CL:0000337,7.38e-17,23;CL:0002321,1.84e-08,70;CL:0000107,8.66e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.60e-08!73;UBERON:0005743!3.60e-08!73;UBERON:0000073!4.71e-08!75;UBERON:0001016!4.71e-08!75;UBERON:0004121!1.11e-07!102;UBERON:0000924!1.11e-07!102;UBERON:0006601!1.11e-07!102;UBERON:0002410!5.42e-07!9;UBERON:0000468!8.63e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.04e-09,95;UBERON:0000924,5.04e-09,95;UBERON:0006601,5.04e-09,95;UBERON:0001017,7.53e-09,73;UBERON:0001016,1.68e-08,75;UBERON:0002410,8.66e-08,9;UBERON:0002346,4.07e-07,64;UBERON:0003075,4.07e-07,64;UBERON:0007284,4.07e-07,64|phase1_expression=1.60148847104794,0,0,0,0.500895729946347,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.68822784320151,1.72269589234506,0.430761996159075,1.07735616342945,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,1.30815093828268,0.659058548203415,0.58328969722285,0.419959264876088,0,0,0,0,1.54355661621568,1.43266719969378,1.54701627683233,7.08107613008592,8.99284664762456,12.6766280701236,1.69422266034566,1.77858959222228,0,0,0,2.09720077362883,1.15265491596466,6.0139975138917,6.21027316325777,6.52007380189284,8.85518051651791,7.50953039235486,7.59442955132715,7.09256485534949,7.35375029288017,6.60695285996332,5.49055553766307,3.22573719838111,11.3422207447967,10.0636407962651,6.77187381723788,4.4669279840221,2.8138130501584,4.27835093775068,11.490514833473,8.82704420954438,10.2519695203915,0.605809546665472,1.13357340160178,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,1.01104889002957,0.11418387971906,0.776813650941515,0,1.21439728736295,0,0.691846491768175,0,0.470354828542819,0,1.23597483867187,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,3.39266750704734,0,0.767146371990992,0.20778804455956,0.811206315338788,2.44414473240759,0.373220911830279,1.51633655060205,2.73574412652416,4.29397461776922,3.67843367093557,2.52086981727489,3.16480117455002,3.19771546011241,2.562274405697,3.93547243150861,4.13925393182425,7.32931175971664,6.61871280587367,5.63043597324636,3.28793598641362,1.94633074457919,2.089512999133,2.46938563689532,4.37875387000685,0,0,0,1.86413195281952,2.34526059981096,1.2604344302271,1.89395788468168,0.787056926989615,0.771335564436891,1.39520366850245,1.60964040839772,0.934122738937356,1.81015834904829,0.32833492815819,0.486412857275134,0,0,0.268412837520744,0.420579897128254,2.77842453424068,0,0.264450566663544,5.11891801284562,4.41249676534833,2.83508414908605,1.00841762311671,1.33426826306922,0.380451252225118,0,0.164698954724011,2.01068167040216,0.994782360205754,0.58489226135736,0,0.648414149624083,0.199141273254367,1.89667900953082,3.99869794134051,5.63538678365402,2.8511185898344,2.52138233317913,2.10407459670956,1.01178459398812,0.442830443938806,0.627994911365499,0.246794327843601,0,1.16791574001266,0.786235980452812,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0,0.184753190166605,4.35830247072115,4.72598431681875,5.09235257325564,3.75504397261603,1.34005005953453,1.42826184531608,0.585400943573396,1.7339865851681,0.664394068946325,1.2756381492599,0.81931657357869,0,0.144649058581512,0,0,0,0,0.321101179975584,1.05490517932983,0.655739781506702,0,7.88770548540642,9.37052986311932,9.47862950024315,5.73525115086125,7.5751549188014,9.6246020468203,7.69140333182299,4.38383786866968,7.11518000303742,0,0,2.49291845134157,1.30309567482861,0,2.65490276679926,6.79785781233948,3.32555912661226,1.50884063804718,1.18120757152309,1.53717573971964,0.516856586336442,0.363533729477506,1.42598951353889,0.948110273807448,0,0,0,3.24109969256358,1.16422815404479,2.14337035031592,1.77340233642274,1.24858172321449,1.97458824722545,0.304464949114599,1.64270195644597,4.44847348814022,0.220528398054962,0,0.645857706783622,0.904693873922338,0.954978752025092,0.984845398470368,0,1.66882771809459,0,2.88941615148511,2.22233432843654,0.376736914009382,0,0.915112692826091,0,0,0,0.954670618015114,5.69404788446044,1.82987520414164,2.16010681643603,1.88179466413022,1.09181281873089,1.75323650300267,0.991841468704031,0,0.129614973291793,0.621339313086926,0,1.64468200648377,3.80554528051325,1.55560950675238,1.03327858782185,2.19642963138012,1.29092962510329,1.3020438484395,2.41176492179135,0.724752362478018,0.288030006257865,0,1.62180172232131,1.64337531463724,1.03936658382236,1.61124026100733,1.58945083825012,0.480781798079875,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,1.77588762699252,1.16628013592318,2.01461539636894,3.86379188064381,0.375364950902364,0,0,0,0,0.920650473014354,0,0.343706364687375,0,0,0,0,0.453142408984205,0,5.60451676954554,6.3843979744165,2.39027048055788,1.70174701947806,3.35381060204772,1.2869045591501,1.55572709461131,1.44224540067226,0.320919209591815,1.76888048234658,1.2673964994512,2.07488975524684,1.68554713445788,1.15245274328765,1.20614484806788,2.85776214769844,0.811190281613988,1.92909220463705,2.06042950401653,1.76638704161277,1.37147700954166,1.77475806159337,1.1921809497366,1.59881058295561,1.2234219453993,2.03075058940024,1.28049581010941,1.05227884575137,0.950628796921032,1.68342681497322,1.66089025373844,1.0835493061312,1.63692417267876,1.54936841185966,1.15743966588685,1.49886346762768,0.701794825336225,1.28922632428979,1.3390183244819,0.220591419119515,0|short_description=p1@uc007nda.1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|HGNC=
|MCL_coexpression_id=2775
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_uc007nda.1_5end
|cluster_id=chr12:17999666..17999694,+
|description=CAGE_peak_1_at_uc007nda.1_5end
|id=chr12:17999666..17999694,+
|ontology_enrichment_celltype=CL:0000540!9.57e-21!33;CL:0000047!9.57e-21!33;CL:0000031!9.57e-21!33;CL:0000404!9.57e-21!33;CL:0000221!6.36e-18!44;CL:0000133!6.36e-18!44;CL:0002319!1.59e-17!43;CL:0000393!7.40e-17!39;CL:0000211!7.40e-17!39;CL:0000117!6.55e-15!23;CL:0000337!6.55e-15!23;CL:0000055!5.90e-14!50;CL:0000107!5.42e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.50e-23,33;CL:0000047,1.50e-23,33;CL:0000031,1.50e-23,33;CL:0000404,1.50e-23,33;CL:0000393,5.99e-20,39;CL:0000211,5.99e-20,39;CL:0000221,6.39e-19,44;CL:0000133,6.39e-19,44;CL:0002319,1.81e-18,43;CL:0000117,7.38e-17,23;CL:0000337,7.38e-17,23;CL:0002321,1.84e-08,70;CL:0000107,8.66e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.60e-08!73;UBERON:0005743!3.60e-08!73;UBERON:0000073!4.71e-08!75;UBERON:0001016!4.71e-08!75;UBERON:0004121!1.11e-07!102;UBERON:0000924!1.11e-07!102;UBERON:0006601!1.11e-07!102;UBERON:0002410!5.42e-07!9;UBERON:0000468!8.63e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.04e-09,95;UBERON:0000924,5.04e-09,95;UBERON:0006601,5.04e-09,95;UBERON:0001017,7.53e-09,73;UBERON:0001016,1.68e-08,75;UBERON:0002410,8.66e-08,9;UBERON:0002346,4.07e-07,64;UBERON:0003075,4.07e-07,64;UBERON:0007284,4.07e-07,64
|phase1_expression=1.60148847104794,0,0,0,0.500895729946347,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.68822784320151,1.72269589234506,0.430761996159075,1.07735616342945,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,1.30815093828268,0.659058548203415,0.58328969722285,0.419959264876088,0,0,0,0,1.54355661621568,1.43266719969378,1.54701627683233,7.08107613008592,8.99284664762456,12.6766280701236,1.69422266034566,1.77858959222228,0,0,0,2.09720077362883,1.15265491596466,6.0139975138917,6.21027316325777,6.52007380189284,8.85518051651791,7.50953039235486,7.59442955132715,7.09256485534949,7.35375029288017,6.60695285996332,5.49055553766307,3.22573719838111,11.3422207447967,10.0636407962651,6.77187381723788,4.4669279840221,2.8138130501584,4.27835093775068,11.490514833473,8.82704420954438,10.2519695203915,0.605809546665472,1.13357340160178,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,1.01104889002957,0.11418387971906,0.776813650941515,0,1.21439728736295,0,0.691846491768175,0,0.470354828542819,0,1.23597483867187,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,3.39266750704734,0,0.767146371990992,0.20778804455956,0.811206315338788,2.44414473240759,0.373220911830279,1.51633655060205,2.73574412652416,4.29397461776922,3.67843367093557,2.52086981727489,3.16480117455002,3.19771546011241,2.562274405697,3.93547243150861,4.13925393182425,7.32931175971664,6.61871280587367,5.63043597324636,3.28793598641362,1.94633074457919,2.089512999133,2.46938563689532,4.37875387000685,0,0,0,1.86413195281952,2.34526059981096,1.2604344302271,1.89395788468168,0.787056926989615,0.771335564436891,1.39520366850245,1.60964040839772,0.934122738937356,1.81015834904829,0.32833492815819,0.486412857275134,0,0,0.268412837520744,0.420579897128254,2.77842453424068,0,0.264450566663544,5.11891801284562,4.41249676534833,2.83508414908605,1.00841762311671,1.33426826306922,0.380451252225118,0,0.164698954724011,2.01068167040216,0.994782360205754,0.58489226135736,0,0.648414149624083,0.199141273254367,1.89667900953082,3.99869794134051,5.63538678365402,2.8511185898344,2.52138233317913,2.10407459670956,1.01178459398812,0.442830443938806,0.627994911365499,0.246794327843601,0,1.16791574001266,0.786235980452812,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0,0.184753190166605,4.35830247072115,4.72598431681875,5.09235257325564,3.75504397261603,1.34005005953453,1.42826184531608,0.585400943573396,1.7339865851681,0.664394068946325,1.2756381492599,0.81931657357869,0,0.144649058581512,0,0,0,0,0.321101179975584,1.05490517932983,0.655739781506702,0,7.88770548540642,9.37052986311932,9.47862950024315,5.73525115086125,7.5751549188014,9.6246020468203,7.69140333182299,4.38383786866968,7.11518000303742,0,0,2.49291845134157,1.30309567482861,0,2.65490276679926,6.79785781233948,3.32555912661226,1.50884063804718,1.18120757152309,1.53717573971964,0.516856586336442,0.363533729477506,1.42598951353889,0.948110273807448,0,0,0,3.24109969256358,1.16422815404479,2.14337035031592,1.77340233642274,1.24858172321449,1.97458824722545,0.304464949114599,1.64270195644597,4.44847348814022,0.220528398054962,0,0.645857706783622,0.904693873922338,0.954978752025092,0.984845398470368,0,1.66882771809459,0,2.88941615148511,2.22233432843654,0.376736914009382,0,0.915112692826091,0,0,0,0.954670618015114,5.69404788446044,1.82987520414164,2.16010681643603,1.88179466413022,1.09181281873089,1.75323650300267,0.991841468704031,0,0.129614973291793,0.621339313086926,0,1.64468200648377,3.80554528051325,1.55560950675238,1.03327858782185,2.19642963138012,1.29092962510329,1.3020438484395,2.41176492179135,0.724752362478018,0.288030006257865,0,1.62180172232131,1.64337531463724,1.03936658382236,1.61124026100733,1.58945083825012,0.480781798079875,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,1.77588762699252,1.16628013592318,2.01461539636894,3.86379188064381,0.375364950902364,0,0,0,0,0.920650473014354,0,0.343706364687375,0,0,0,0,0.453142408984205,0,5.60451676954554,6.3843979744165,2.39027048055788,1.70174701947806,3.35381060204772,1.2869045591501,1.55572709461131,1.44224540067226,0.320919209591815,1.76888048234658,1.2673964994512,2.07488975524684,1.68554713445788,1.15245274328765,1.20614484806788,2.85776214769844,0.811190281613988,1.92909220463705,2.06042950401653,1.76638704161277,1.37147700954166,1.77475806159337,1.1921809497366,1.59881058295561,1.2234219453993,2.03075058940024,1.28049581010941,1.05227884575137,0.950628796921032,1.68342681497322,1.66089025373844,1.0835493061312,1.63692417267876,1.54936841185966,1.15743966588685,1.49886346762768,0.701794825336225,1.28922632428979,1.3390183244819,0.220591419119515,0
|short_description=p1@uc007nda.1
}}

Latest revision as of 21:40, 4 August 2015

Short description:p1@uc007nda.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_uc007nda.1_5end
Coexpression cluster:MCL_coexpression_mm9:2775
Association with transcript: 0bp_to_uc007nda.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@uc007nda.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.69
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.04e-0995
ectoderm5.04e-0995
presumptive ectoderm5.04e-0995
central nervous system7.53e-0973
nervous system1.68e-0875
autonomic nervous system8.66e-089
neurectoderm4.07e-0764
neural plate4.07e-0764
presumptive neural plate4.07e-0764
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