FFCP PHASE1:Mm9::chr6:128624768..128624779,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:128624768..128624779,+|id=chr6:128624768..128624779,+|ontology_enrichment_celltype=CL:0000239!8.50e-13!6;CL:0000677!8.50e-13!6;CL:0000212!8.50e-13!6;CL:0000584!8.50e-13!6;CL:0000075!7.62e-11!7;CL:0002563!3.05e-08!9;CL:0002251!3.05e-08!9;CL:0000473!8.18e-07!3;CL:0000627!8.18e-07!3;CL:0000682!8.18e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,3.84e-13,6;CL:0000677,3.84e-13,6;CL:0000584,3.84e-13,6;CL:0000075,2.73e-11,7;CL:0002563,8.22e-09,9;CL:0002251,8.22e-09,9;CL:0000682,8.97e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.64e-23!43;UBERON:0000344!3.31e-19!15;UBERON:0005409!6.71e-18!59;UBERON:0001242!2.24e-15!13;UBERON:0000060!2.24e-15!13;UBERON:0001262!2.24e-15!13;UBERON:0004786!2.24e-15!13;UBERON:0004923!7.03e-11!24;UBERON:0001007!1.66e-08!128;UBERON:0001555!1.66e-08!128;UBERON:0007026!1.66e-08!128;UBERON:0004119!2.92e-08!130;UBERON:0000925!2.92e-08!130;UBERON:0006595!2.92e-08!130;UBERON:0003350!3.05e-08!9;UBERON:0004808!3.05e-08!9;UBERON:0001277!3.05e-08!9;UBERON:0000331!1.99e-07!3;UBERON:0002116!1.99e-07!3;UBERON:0001204!1.99e-07!3;UBERON:0001168!1.99e-07!3;UBERON:0004921!4.71e-07!126;UBERON:0004185!4.71e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.25e-30,15;UBERON:0000160,6.98e-28,31;UBERON:0001242,1.60e-22,13;UBERON:0001262,1.60e-22,13;UBERON:0004786,1.60e-22,13;UBERON:0002108,4.85e-19,4;UBERON:0004923,1.83e-18,24;UBERON:0005409,1.13e-17,47;UBERON:0000331,1.35e-14,3;UBERON:0002116,1.35e-14,3;UBERON:0001204,1.35e-14,3;UBERON:0001168,1.35e-14,3;UBERON:0001962,1.44e-10,2;UBERON:0001961,1.44e-10,2;UBERON:0001744,1.44e-10,2;UBERON:0001007,2.40e-09,116;UBERON:0001555,2.40e-09,116;UBERON:0007026,2.40e-09,116;UBERON:0004119,3.84e-09,118;UBERON:0000925,3.84e-09,118;UBERON:0006595,3.84e-09,118;UBERON:0003350,8.22e-09,9;UBERON:0004808,8.22e-09,9;UBERON:0001277,8.22e-09,9;UBERON:0002465,2.53e-07,3;UBERON:0000485,3.15e-07,11;UBERON:0004921,5.01e-07,114|phase1_expression=0,1.04692622291808,2.72999543633722,4.83942738090928,3.50627010962443,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,3.21172993494038,1.14846392823004,0.430761996159075,1.07735616342945,7.03086651988583,1.26015064879965,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,1.89811624617805,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,2.69645822596266,0.648414149624083,1.39398891278057,0,0,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr6:128624768..128624779,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:128624768..128624779,+ | |||
|description=CAGE_peak_at_chr6:128624768..128624779,+ | |||
|id=chr6:128624768..128624779,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.50e-13!6;CL:0000677!8.50e-13!6;CL:0000212!8.50e-13!6;CL:0000584!8.50e-13!6;CL:0000075!7.62e-11!7;CL:0002563!3.05e-08!9;CL:0002251!3.05e-08!9;CL:0000473!8.18e-07!3;CL:0000627!8.18e-07!3;CL:0000682!8.18e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.84e-13,6;CL:0000677,3.84e-13,6;CL:0000584,3.84e-13,6;CL:0000075,2.73e-11,7;CL:0002563,8.22e-09,9;CL:0002251,8.22e-09,9;CL:0000682,8.97e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.64e-23!43;UBERON:0000344!3.31e-19!15;UBERON:0005409!6.71e-18!59;UBERON:0001242!2.24e-15!13;UBERON:0000060!2.24e-15!13;UBERON:0001262!2.24e-15!13;UBERON:0004786!2.24e-15!13;UBERON:0004923!7.03e-11!24;UBERON:0001007!1.66e-08!128;UBERON:0001555!1.66e-08!128;UBERON:0007026!1.66e-08!128;UBERON:0004119!2.92e-08!130;UBERON:0000925!2.92e-08!130;UBERON:0006595!2.92e-08!130;UBERON:0003350!3.05e-08!9;UBERON:0004808!3.05e-08!9;UBERON:0001277!3.05e-08!9;UBERON:0000331!1.99e-07!3;UBERON:0002116!1.99e-07!3;UBERON:0001204!1.99e-07!3;UBERON:0001168!1.99e-07!3;UBERON:0004921!4.71e-07!126;UBERON:0004185!4.71e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.25e-30,15;UBERON:0000160,6.98e-28,31;UBERON:0001242,1.60e-22,13;UBERON:0001262,1.60e-22,13;UBERON:0004786,1.60e-22,13;UBERON:0002108,4.85e-19,4;UBERON:0004923,1.83e-18,24;UBERON:0005409,1.13e-17,47;UBERON:0000331,1.35e-14,3;UBERON:0002116,1.35e-14,3;UBERON:0001204,1.35e-14,3;UBERON:0001168,1.35e-14,3;UBERON:0001962,1.44e-10,2;UBERON:0001961,1.44e-10,2;UBERON:0001744,1.44e-10,2;UBERON:0001007,2.40e-09,116;UBERON:0001555,2.40e-09,116;UBERON:0007026,2.40e-09,116;UBERON:0004119,3.84e-09,118;UBERON:0000925,3.84e-09,118;UBERON:0006595,3.84e-09,118;UBERON:0003350,8.22e-09,9;UBERON:0004808,8.22e-09,9;UBERON:0001277,8.22e-09,9;UBERON:0002465,2.53e-07,3;UBERON:0000485,3.15e-07,11;UBERON:0004921,5.01e-07,114 | |||
|phase1_expression=0,1.04692622291808,2.72999543633722,4.83942738090928,3.50627010962443,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,3.21172993494038,1.14846392823004,0.430761996159075,1.07735616342945,7.03086651988583,1.26015064879965,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,1.89811624617805,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,2.69645822596266,0.648414149624083,1.39398891278057,0,0,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr6:128624768..128624779,+ | |||
}} |
Latest revision as of 05:44, 5 August 2015
Short description: | p@chr6:128624768..128624779, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:128624768..128624779, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.84e-13 | 6 |
gut absorptive cell | 3.84e-13 | 6 |
enterocyte | 3.84e-13 | 6 |
columnar/cuboidal epithelial cell | 2.73e-11 | 7 |
intestinal epithelial cell | 8.22e-09 | 9 |
epithelial cell of alimentary canal | 8.22e-09 | 9 |
M cell of gut | 8.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.25e-30 | 15 |
intestine | 6.98e-28 | 31 |
intestinal mucosa | 1.60e-22 | 13 |
wall of intestine | 1.60e-22 | 13 |
gastrointestinal system mucosa | 1.60e-22 | 13 |
small intestine | 4.85e-19 | 4 |
organ component layer | 1.83e-18 | 24 |
gastrointestinal system | 1.13e-17 | 47 |
ileal mucosa | 1.35e-14 | 3 |
ileum | 1.35e-14 | 3 |
mucosa of small intestine | 1.35e-14 | 3 |
wall of small intestine | 1.35e-14 | 3 |
gut-associated lymphoid tissue | 1.44e-10 | 2 |
mucosa-associated lymphoid tissue | 1.44e-10 | 2 |
lymphoid tissue | 1.44e-10 | 2 |
digestive system | 2.40e-09 | 116 |
digestive tract | 2.40e-09 | 116 |
primitive gut | 2.40e-09 | 116 |
endoderm-derived structure | 3.84e-09 | 118 |
endoderm | 3.84e-09 | 118 |
presumptive endoderm | 3.84e-09 | 118 |
epithelium of mucosa | 8.22e-09 | 9 |
gastrointestinal system epithelium | 8.22e-09 | 9 |
intestinal epithelium | 8.22e-09 | 9 |
lymphoid system | 2.53e-07 | 3 |
simple columnar epithelium | 3.15e-07 | 11 |
subdivision of digestive tract | 5.01e-07 | 114 |