FFCP PHASE1:Mm9::chr4:153975408..153975411,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=176|UniProt=|association_with_transcript=-12bp_to_ENSMUST00000132106_5end|description=CAGE_peak_1_at_ENSMUST00000132106_5end|id=chr4:153975408..153975411,+|ontology_enrichment_celltype=CL:0002453!8.49e-13!8;CL:0000333!4.45e-10!10;CL:0000095!4.45e-10!10;CL:0000243!4.45e-10!10;CL:0000123!4.45e-10!10;CL:0000125!4.45e-10!10;CL:0000030!4.45e-10!10;CL:0000339!4.45e-10!10;CL:0000128!3.33e-08!6;CL:0000126!3.33e-08!6;CL:0000127!3.33e-08!6;CL:0002604!5.19e-07!2;CL:0002605!5.19e-07!2|ontology_enrichment_celltype_v019_2=CL:0002453,1.19e-45,8;CL:0000128,3.01e-39,6;CL:0000126,3.01e-39,6;CL:0000127,3.01e-39,6;CL:0000333,1.13e-36,10;CL:0000095,1.13e-36,10;CL:0000243,1.13e-36,10;CL:0000123,1.13e-36,10;CL:0000125,1.13e-36,10;CL:0000030,1.13e-36,10;CL:0000339,1.13e-36,10;CL:0002605,3.41e-30,2;CL:0002604,3.41e-30,2;CL:0002319,6.37e-09,43;CL:0002603,9.17e-09,2;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44;CL:0000878,1.53e-08,2;CL:0000129,1.53e-08,2;CL:0000219,3.56e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001954!6.74e-14!7;UBERON:0003022!6.74e-14!7;UBERON:0002421!6.74e-14!7;UBERON:0000349!6.74e-14!7;UBERON:0002600!6.74e-14!7;UBERON:0000033!7.63e-10!63;UBERON:0000955!1.26e-07!50;UBERON:0006238!1.26e-07!50;UBERON:0004733!1.86e-07!6;UBERON:0004732!1.86e-07!6;UBERON:0002028!1.86e-07!6;UBERON:0007277!1.86e-07!6;UBERON:0007811!4.44e-07!86;UBERON:0004121!4.47e-07!102;UBERON:0000924!4.47e-07!102;UBERON:0006601!4.47e-07!102;UBERON:0001017!4.65e-07!73;UBERON:0005743!4.65e-07!73;UBERON:0002037!6.33e-07!4;UBERON:0002680!6.33e-07!4;UBERON:0001895!6.33e-07!4;UBERON:0010092!6.33e-07!4;UBERON:0006215!6.33e-07!4;UBERON:0000073!8.98e-07!75;UBERON:0001016!8.98e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.96e-19,7;UBERON:0003022,1.96e-19,7;UBERON:0002421,1.96e-19,7;UBERON:0000349,1.96e-19,7;UBERON:0002600,1.96e-19,7;UBERON:0002619,1.87e-08,17;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.70e-07,21;UBERON:0001869,5.70e-07,21;UBERON:0000203,5.70e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36050312760893,3.95435128922049,3.69416808241138,1.1198913730029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,2.30530983192933,0,0,0,0,0,0,0.191690942036473,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000132106}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENSMUST00000132106_5end | |||
|cluster_id=chr4:153975408..153975411,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000132106_5end | |||
|id=chr4:153975408..153975411,+ | |||
|ontology_enrichment_celltype=CL:0002453!8.49e-13!8;CL:0000333!4.45e-10!10;CL:0000095!4.45e-10!10;CL:0000243!4.45e-10!10;CL:0000123!4.45e-10!10;CL:0000125!4.45e-10!10;CL:0000030!4.45e-10!10;CL:0000339!4.45e-10!10;CL:0000128!3.33e-08!6;CL:0000126!3.33e-08!6;CL:0000127!3.33e-08!6;CL:0002604!5.19e-07!2;CL:0002605!5.19e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.19e-45,8;CL:0000128,3.01e-39,6;CL:0000126,3.01e-39,6;CL:0000127,3.01e-39,6;CL:0000333,1.13e-36,10;CL:0000095,1.13e-36,10;CL:0000243,1.13e-36,10;CL:0000123,1.13e-36,10;CL:0000125,1.13e-36,10;CL:0000030,1.13e-36,10;CL:0000339,1.13e-36,10;CL:0002605,3.41e-30,2;CL:0002604,3.41e-30,2;CL:0002319,6.37e-09,43;CL:0002603,9.17e-09,2;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44;CL:0000878,1.53e-08,2;CL:0000129,1.53e-08,2;CL:0000219,3.56e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001954!6.74e-14!7;UBERON:0003022!6.74e-14!7;UBERON:0002421!6.74e-14!7;UBERON:0000349!6.74e-14!7;UBERON:0002600!6.74e-14!7;UBERON:0000033!7.63e-10!63;UBERON:0000955!1.26e-07!50;UBERON:0006238!1.26e-07!50;UBERON:0004733!1.86e-07!6;UBERON:0004732!1.86e-07!6;UBERON:0002028!1.86e-07!6;UBERON:0007277!1.86e-07!6;UBERON:0007811!4.44e-07!86;UBERON:0004121!4.47e-07!102;UBERON:0000924!4.47e-07!102;UBERON:0006601!4.47e-07!102;UBERON:0001017!4.65e-07!73;UBERON:0005743!4.65e-07!73;UBERON:0002037!6.33e-07!4;UBERON:0002680!6.33e-07!4;UBERON:0001895!6.33e-07!4;UBERON:0010092!6.33e-07!4;UBERON:0006215!6.33e-07!4;UBERON:0000073!8.98e-07!75;UBERON:0001016!8.98e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.96e-19,7;UBERON:0003022,1.96e-19,7;UBERON:0002421,1.96e-19,7;UBERON:0000349,1.96e-19,7;UBERON:0002600,1.96e-19,7;UBERON:0002619,1.87e-08,17;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.70e-07,21;UBERON:0001869,5.70e-07,21;UBERON:0000203,5.70e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36050312760893,3.95435128922049,3.69416808241138,1.1198913730029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,2.30530983192933,0,0,0,0,0,0,0.191690942036473,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.47202963994889,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000132106 | |||
}} |
Latest revision as of 06:42, 5 August 2015
Short description: | p1@ENSMUST00000132106 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000132106_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | -12bp_to_ENSMUST00000132106_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.19e-45 | 8 |
oligodendrocyte | 3.01e-39 | 6 |
macroglial cell | 3.01e-39 | 6 |
astrocyte | 3.01e-39 | 6 |
migratory neural crest cell | 1.13e-36 | 10 |
neuron associated cell | 1.13e-36 | 10 |
glial cell (sensu Vertebrata) | 1.13e-36 | 10 |
neuron associated cell (sensu Vertebrata) | 1.13e-36 | 10 |
glial cell | 1.13e-36 | 10 |
glioblast | 1.13e-36 | 10 |
glioblast (sensu Vertebrata) | 1.13e-36 | 10 |
astrocyte of the cerebral cortex | 3.41e-30 | 2 |
astrocyte of the hippocampus | 3.41e-30 | 2 |
neural cell | 6.37e-09 | 43 |
astrocyte of the cerebellum | 9.17e-09 | 2 |
ectodermal cell | 9.96e-09 | 44 |
neurectodermal cell | 9.96e-09 | 44 |
central nervous system macrophage | 1.53e-08 | 2 |
microglial cell | 1.53e-08 | 2 |
motile cell | 3.56e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.96e-19 | 7 |
lobe parts of cerebral cortex | 1.96e-19 | 7 |
hippocampal formation | 1.96e-19 | 7 |
limbic system | 1.96e-19 | 7 |
limbic lobe | 1.96e-19 | 7 |
regional part of cerebral cortex | 1.87e-08 | 17 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
cerebral cortex | 5.70e-07 | 21 |
cerebral hemisphere | 5.70e-07 | 21 |
pallium | 5.70e-07 | 21 |