FFCP PHASE1:Mm9::chr9:50307249..50307269,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1854|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:50307249..50307269,+|id=chr9:50307249..50307269,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,2.39e-15,3;CL:0000351,2.39e-15,3;CL:0000068,3.90e-14,3;CL:0002202,3.90e-14,3;CL:0000069,3.90e-14,3;CL:0002632,3.90e-14,3;CL:0002368,3.90e-14,3;CL:0000307,3.90e-14,3;CL:0000377,3.90e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!2.14e-14!11;UBERON:0000474!1.09e-11!9;UBERON:0003134!2.44e-10!8;UBERON:0003975!2.15e-07!5;UBERON:0000161!3.59e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.88e-26,11;UBERON:0000474,4.86e-18,9;UBERON:0000358,2.39e-15,3;UBERON:0000307,2.39e-15,3;UBERON:0007010,2.39e-15,3;UBERON:0003975,6.46e-15,5;UBERON:0005631,9.81e-15,3;UBERON:0000478,9.81e-15,3;UBERON:0000158,9.81e-15,3;UBERON:0003134,3.54e-14,8;UBERON:0003126,3.90e-14,3;UBERON:0001005,3.90e-14,3;UBERON:0007196,3.90e-14,3;UBERON:0001558,3.90e-14,3;UBERON:0007023,1.54e-11,51;UBERON:0005795,4.75e-11,4;UBERON:0000995,4.75e-11,4;UBERON:0001911,1.29e-10,2;UBERON:0000076,1.29e-10,2;UBERON:0005333,1.29e-10,2;UBERON:0008425,1.29e-10,2;UBERON:0005311,1.29e-10,2;UBERON:0001987,5.79e-10,2;UBERON:0003124,5.79e-10,2;UBERON:0004340,5.79e-10,2;UBERON:0004175,2.26e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,10.1349936771093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94618598241064,0,0,0,0.150704817835715,0,0.2562274405697,0,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0,0,0,0.581857461502877,0.210407459670956,0.379419222745544,0.885660887877613,0.784993639206874,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,2.45882136509518,5.24279817978992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0.35613120733451,0.162886959353576,3.13443233647817,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,1.69465656691056,0.661585194164886,0.65954501176592,0.161464426695906,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.26175594198403,0,8.69875038321696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,1.99787358036658,9.68909651382338,6.2117308054709,0.386379188064381,0.187682475451182,5.31139710375069,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr9:50307249..50307269,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1854 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:50307249..50307269,+ | |||
|description=CAGE_peak_at_chr9:50307249..50307269,+ | |||
|id=chr9:50307249..50307269,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.39e-15,3;CL:0000351,2.39e-15,3;CL:0000068,3.90e-14,3;CL:0002202,3.90e-14,3;CL:0000069,3.90e-14,3;CL:0002632,3.90e-14,3;CL:0002368,3.90e-14,3;CL:0000307,3.90e-14,3;CL:0000377,3.90e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!2.14e-14!11;UBERON:0000474!1.09e-11!9;UBERON:0003134!2.44e-10!8;UBERON:0003975!2.15e-07!5;UBERON:0000161!3.59e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.88e-26,11;UBERON:0000474,4.86e-18,9;UBERON:0000358,2.39e-15,3;UBERON:0000307,2.39e-15,3;UBERON:0007010,2.39e-15,3;UBERON:0003975,6.46e-15,5;UBERON:0005631,9.81e-15,3;UBERON:0000478,9.81e-15,3;UBERON:0000158,9.81e-15,3;UBERON:0003134,3.54e-14,8;UBERON:0003126,3.90e-14,3;UBERON:0001005,3.90e-14,3;UBERON:0007196,3.90e-14,3;UBERON:0001558,3.90e-14,3;UBERON:0007023,1.54e-11,51;UBERON:0005795,4.75e-11,4;UBERON:0000995,4.75e-11,4;UBERON:0001911,1.29e-10,2;UBERON:0000076,1.29e-10,2;UBERON:0005333,1.29e-10,2;UBERON:0008425,1.29e-10,2;UBERON:0005311,1.29e-10,2;UBERON:0001987,5.79e-10,2;UBERON:0003124,5.79e-10,2;UBERON:0004340,5.79e-10,2;UBERON:0004175,2.26e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,10.1349936771093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94618598241064,0,0,0,0.150704817835715,0,0.2562274405697,0,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0,0,0,0.581857461502877,0.210407459670956,0.379419222745544,0.885660887877613,0.784993639206874,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,2.45882136509518,5.24279817978992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0.35613120733451,0.162886959353576,3.13443233647817,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,1.69465656691056,0.661585194164886,0.65954501176592,0.161464426695906,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0.26175594198403,0,8.69875038321696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,1.99787358036658,9.68909651382338,6.2117308054709,0.386379188064381,0.187682475451182,5.31139710375069,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr9:50307249..50307269,+ | |||
}} |
Latest revision as of 06:46, 5 August 2015
Short description: | p@chr9:50307249..50307269, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:50307249..50307269, + |
Coexpression cluster: | MCL_coexpression_mm9:1854 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.39e-15 | 3 |
trophoblast cell | 2.39e-15 | 3 |
duct epithelial cell | 3.90e-14 | 3 |
epithelial cell of tracheobronchial tree | 3.90e-14 | 3 |
branched duct epithelial cell | 3.90e-14 | 3 |
epithelial cell of lower respiratory tract | 3.90e-14 | 3 |
respiratory epithelial cell | 3.90e-14 | 3 |
tracheal epithelial cell | 3.90e-14 | 3 |
tracheoblast | 3.90e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
female organism | 3.88e-26 | 11 |
female reproductive system | 4.86e-18 | 9 |
blastocyst | 2.39e-15 | 3 |
blastula | 2.39e-15 | 3 |
cleaving embryo | 2.39e-15 | 3 |
internal female genitalia | 6.46e-15 | 5 |
extraembryonic membrane | 9.81e-15 | 3 |
extraembryonic structure | 9.81e-15 | 3 |
membranous layer | 9.81e-15 | 3 |
female reproductive organ | 3.54e-14 | 8 |
trachea | 3.90e-14 | 3 |
respiratory airway | 3.90e-14 | 3 |
tracheobronchial tree | 3.90e-14 | 3 |
lower respiratory tract | 3.90e-14 | 3 |
adult organism | 1.54e-11 | 51 |
embryonic uterus | 4.75e-11 | 4 |
uterus | 4.75e-11 | 4 |
mammary gland | 1.29e-10 | 2 |
external ectoderm | 1.29e-10 | 2 |
mammary bud | 1.29e-10 | 2 |
mammary ridge | 1.29e-10 | 2 |
mammary placode | 1.29e-10 | 2 |
placenta | 5.79e-10 | 2 |
chorion | 5.79e-10 | 2 |
allantois | 5.79e-10 | 2 |
internal genitalia | 2.26e-08 | 9 |