FFCP PHASE1:Mm9::chr12:80633559..80633564,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:80633559..80633564,+|id=chr12:80633559..80633564,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,2.84e-11,3;CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.93e-16!128;UBERON:0001555!1.93e-16!128;UBERON:0007026!1.93e-16!128;UBERON:0004119!5.21e-16!130;UBERON:0000925!5.21e-16!130;UBERON:0006595!5.21e-16!130;UBERON:0004921!1.26e-14!126;UBERON:0004185!1.26e-14!126;UBERON:0001041!1.32e-10!92;UBERON:0000077!1.57e-10!97;UBERON:0005409!8.85e-09!59;UBERON:0005178!3.38e-07!17;UBERON:0005181!3.38e-07!17;UBERON:0002224!3.38e-07!17;UBERON:0000915!3.38e-07!17;UBERON:0008947!3.38e-07!17;UBERON:0003258!3.38e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1;UBERON:0000945,1.99e-08,16;UBERON:0010039,1.99e-08,16|phase1_expression=0,0.697950815278722,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.68822784320151,0,0,0.215471232685889,0,0,0,0,0,0,1.1554064790051,0,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0,1.51547326768267,0.538192240565737,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0.307435147943927,0.775284879504663,1.45413491791002,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,1.29606408986162,0.836353184057875,0.218362563746178,1.48350781023303,1.57041565878138,4.71160695571253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:80633559..80633564,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:80633559..80633564,+ | |||
|description=CAGE_peak_at_chr12:80633559..80633564,+ | |||
|id=chr12:80633559..80633564,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.84e-11,3;CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.93e-16!128;UBERON:0001555!1.93e-16!128;UBERON:0007026!1.93e-16!128;UBERON:0004119!5.21e-16!130;UBERON:0000925!5.21e-16!130;UBERON:0006595!5.21e-16!130;UBERON:0004921!1.26e-14!126;UBERON:0004185!1.26e-14!126;UBERON:0001041!1.32e-10!92;UBERON:0000077!1.57e-10!97;UBERON:0005409!8.85e-09!59;UBERON:0005178!3.38e-07!17;UBERON:0005181!3.38e-07!17;UBERON:0002224!3.38e-07!17;UBERON:0000915!3.38e-07!17;UBERON:0008947!3.38e-07!17;UBERON:0003258!3.38e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1;UBERON:0000945,1.99e-08,16;UBERON:0010039,1.99e-08,16 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.68822784320151,0,0,0.215471232685889,0,0,0,0,0,0,1.1554064790051,0,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0,1.51547326768267,0.538192240565737,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0.307435147943927,0.775284879504663,1.45413491791002,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,1.29606408986162,0.836353184057875,0.218362563746178,1.48350781023303,1.57041565878138,4.71160695571253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:80633559..80633564,+ | |||
}} |
Latest revision as of 07:46, 5 August 2015
Short description: | p@chr12:80633559..80633564, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80633559..80633564, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.84e-11 | 3 |
lining cell | 1.19e-09 | 1 |
meso-epithelial cell | 1.19e-09 | 1 |
endothelial cell | 1.19e-09 | 1 |
endothelial cell of sinusoid | 1.19e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.19e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.19e-09 | 1 |
hepatic sinusoid | 1.19e-09 | 1 |
parenchyma | 1.19e-09 | 1 |
abdomen blood vessel | 1.19e-09 | 1 |
sinusoid | 1.19e-09 | 1 |
digestive system duct | 1.19e-09 | 1 |
abdominal segment blood vessel | 1.19e-09 | 1 |
trunk blood vessel | 1.19e-09 | 1 |
liver parenchyma | 1.19e-09 | 1 |
liver lobule | 1.19e-09 | 1 |
biliary system | 1.19e-09 | 1 |
biliary tree | 1.19e-09 | 1 |
biliary bud | 1.19e-09 | 1 |
hepatic duct | 1.19e-09 | 1 |
stomach | 1.99e-08 | 16 |
food storage organ | 1.99e-08 | 16 |