FFCP PHASE1:Mm9::chr4:3502064..3502080,+: Difference between revisions
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{{FFCP|EntrezGene=116940|HGNC=|UniProt=|association_with_transcript=-16bp_to_ENSMUST00000132518_5end|description=CAGE_peak_3_at_Tgs1_5end|id=chr4:3502064..3502080,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.02e-08!29;UBERON:0003081!7.06e-08!88;UBERON:0001048!1.29e-07!147;UBERON:0002370!2.12e-07!23;UBERON:0000974!2.12e-07!23;UBERON:0004807!2.12e-07!23;UBERON:0005058!2.12e-07!23;UBERON:0003351!2.12e-07!23;UBERON:0009113!2.12e-07!23;UBERON:0003295!2.12e-07!23;UBERON:0009722!2.12e-07!23;UBERON:0005562!2.12e-07!23;UBERON:0007690!2.12e-07!23;UBERON:0000065!5.20e-07!41;UBERON:0003408!7.75e-07!24;UBERON:0006562!8.67e-07!24;UBERON:0001557!8.67e-07!24;UBERON:0001042!8.67e-07!24;UBERON:0008814!8.67e-07!24;UBERON:0009145!8.67e-07!24;UBERON:0002390!8.99e-07!45;UBERON:0003061!8.99e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.38e-09,43;UBERON:0001048,3.49e-09,134;UBERON:0007811,1.19e-08,36;UBERON:0004177,2.45e-08,29;UBERON:0005057,2.45e-08,29;UBERON:0000077,7.52e-08,35;UBERON:0003081,8.29e-08,87;UBERON:0002370,1.29e-07,23;UBERON:0000974,1.29e-07,23;UBERON:0004807,1.29e-07,23;UBERON:0005058,1.29e-07,23;UBERON:0003351,1.29e-07,23;UBERON:0009113,1.29e-07,23;UBERON:0003295,1.29e-07,23;UBERON:0009722,1.29e-07,23;UBERON:0005562,1.29e-07,23;UBERON:0007690,1.29e-07,23;UBERON:0002390,3.91e-07,45;UBERON:0003061,3.91e-07,45;UBERON:0000065,4.77e-07,41;UBERON:0003408,4.90e-07,24;UBERON:0006562,5.50e-07,24;UBERON:0001557,5.50e-07,24;UBERON:0001042,5.50e-07,24;UBERON:0008814,5.50e-07,24;UBERON:0009145,5.50e-07,24|phase1_expression=2.08193501236232,1.39590163055744,1.36499771816861,2.11724947914781,0.500895729946347,1.00727563147134,0.700837921786577,1.42035655785734,5.77233760821834,6.78787126333781,4.10923123741212,2.87179772383211,2.9104124088305,1.57356724354195,2.33176833270964,1.41732687172878,3.49780939064073,2.99689057090326,2.87940310572051,2.97072756258621,1.19060606211498,3.17731043842833,4.17919662622297,1.11994695955385,0.68822784320151,0,0.430761996159075,0.430942465371778,0.190023419456374,0.756090389279792,0.221730510655305,0.635030673459631,2.46025915033828,0,1.1554064790051,0.997407872150954,0.816677425049476,0.418531630736908,0,1.57057123192139,1.17646297606203,2.73218193983378,0.971020706062307,1.6366586336825,1.01376931219515,0.550640256485045,0,0.436050312760893,0,0.58328969722285,0.279972843250725,0,2.34895648480831,0.725362142011344,2.35265659399725,1.80081605225163,1.14613375975503,0,0,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0.384218305321555,2.17748185847803,0.405017814995072,0.420649922702764,0.285650984403804,0.662605622854841,0.857435594504678,0.287536413054709,0.919218786610021,0,1.53224805702225,1.38245879930619,0.923204014111357,1.09785172322892,0,0.558365998002762,1.12552522006336,1.68078072554491,1.47314292736834,1.56608848879013,1.4911955666024,1.8931548333296,1.058001841495,4.63783181922684,0.860423876981386,1.3599426674155,0.539703191637817,1.94932925234301,1.79210754838934,1.40444420131752,1.1930122580464,1.03914401841148,0.70667914902068,1.69012103732017,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,1.01104889002957,1.82694207550496,4.40194402200192,0.593768556259299,1.38788261412909,1.21786191324856,0.691846491768175,1.3565037649736,1.64624189989987,1.38233250462643,0.741584903203122,1.3013942122792,4.42305275974937,3.07357014900077,2.42925670306433,3.87900202508178,0,2.63502717310392,2.93225389538837,0.510914110417183,3.35482348616577,1.79970819298022,2.54140454146129,2.39665023047716,0.915001205637253,2.76439574648302,2.08589184230732,3.58001640262463,1.66230435647648,1.62241263067758,2.64782346010822,2.23932547098167,1.51633655060205,0.420883711772948,3.77349284591841,3.67843367093557,2.88099407688559,2.86339153887859,2.9255694635071,3.84341160854549,3.18585863503078,2.58703370739016,2.37124792226126,3.59301552318857,3.16712023495108,1.53437012699302,2.50242524303038,2.089512999133,1.4404749548556,1.39323986772945,0,2.05878325691772,2.27330799516474,2.89976081549703,2.57978665979206,3.24111710629827,2.3674473558521,2.55793501271625,2.77680803197281,2.32533944750408,2.41446061259657,1.40118410840603,1.81015834904829,1.80584210487005,1.78351381000883,1.60819986167866,1.75640092232841,1.74468344388483,1.68231958851302,3.19004298375782,0,0.793351699990633,1.91959425481711,2.78684006232526,2.19074684247559,1.61346819698674,1.33426826306922,1.90225626112559,1.42358718463353,1.4822905925161,1.75934646160189,0.198956472041151,0.38992817423824,0,1.72910439899755,1.59313018603494,0.189667900953082,2.97046132785295,2.25415471346161,2.8511185898344,1.74557238450863,2.73529697572242,1.89709611372772,1.18088118383682,1.41298855057237,1.85095745882701,1.48226313543574,3.33690211432188,3.34150291692445,2.47348323623339,1.01430060694251,1.4470629585145,2.03700681425136,1.1507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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:116940 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENSMUST00000132518_5end | |||
|cluster_id=chr4:3502064..3502080,+ | |||
|description=CAGE_peak_3_at_Tgs1_5end | |||
|id=chr4:3502064..3502080,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.02e-08!29;UBERON:0003081!7.06e-08!88;UBERON:0001048!1.29e-07!147;UBERON:0002370!2.12e-07!23;UBERON:0000974!2.12e-07!23;UBERON:0004807!2.12e-07!23;UBERON:0005058!2.12e-07!23;UBERON:0003351!2.12e-07!23;UBERON:0009113!2.12e-07!23;UBERON:0003295!2.12e-07!23;UBERON:0009722!2.12e-07!23;UBERON:0005562!2.12e-07!23;UBERON:0007690!2.12e-07!23;UBERON:0000065!5.20e-07!41;UBERON:0003408!7.75e-07!24;UBERON:0006562!8.67e-07!24;UBERON:0001557!8.67e-07!24;UBERON:0001042!8.67e-07!24;UBERON:0008814!8.67e-07!24;UBERON:0009145!8.67e-07!24;UBERON:0002390!8.99e-07!45;UBERON:0003061!8.99e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.38e-09,43;UBERON:0001048,3.49e-09,134;UBERON:0007811,1.19e-08,36;UBERON:0004177,2.45e-08,29;UBERON:0005057,2.45e-08,29;UBERON:0000077,7.52e-08,35;UBERON:0003081,8.29e-08,87;UBERON:0002370,1.29e-07,23;UBERON:0000974,1.29e-07,23;UBERON:0004807,1.29e-07,23;UBERON:0005058,1.29e-07,23;UBERON:0003351,1.29e-07,23;UBERON:0009113,1.29e-07,23;UBERON:0003295,1.29e-07,23;UBERON:0009722,1.29e-07,23;UBERON:0005562,1.29e-07,23;UBERON:0007690,1.29e-07,23;UBERON:0002390,3.91e-07,45;UBERON:0003061,3.91e-07,45;UBERON:0000065,4.77e-07,41;UBERON:0003408,4.90e-07,24;UBERON:0006562,5.50e-07,24;UBERON:0001557,5.50e-07,24;UBERON:0001042,5.50e-07,24;UBERON:0008814,5.50e-07,24;UBERON:0009145,5.50e-07,24 | |||
|phase1_expression=2.08193501236232,1.39590163055744,1.36499771816861,2.11724947914781,0.500895729946347,1.00727563147134,0.700837921786577,1.42035655785734,5.77233760821834,6.78787126333781,4.10923123741212,2.87179772383211,2.9104124088305,1.57356724354195,2.33176833270964,1.41732687172878,3.49780939064073,2.99689057090326,2.87940310572051,2.97072756258621,1.19060606211498,3.17731043842833,4.17919662622297,1.11994695955385,0.68822784320151,0,0.430761996159075,0.430942465371778,0.190023419456374,0.756090389279792,0.221730510655305,0.635030673459631,2.46025915033828,0,1.1554064790051,0.997407872150954,0.816677425049476,0.418531630736908,0,1.57057123192139,1.17646297606203,2.73218193983378,0.971020706062307,1.6366586336825,1.01376931219515,0.550640256485045,0,0.436050312760893,0,0.58328969722285,0.279972843250725,0,2.34895648480831,0.725362142011344,2.35265659399725,1.80081605225163,1.14613375975503,0,0,1.05798195854407,0.633831403506179,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0,0.384218305321555,2.17748185847803,0.405017814995072,0.420649922702764,0.285650984403804,0.662605622854841,0.857435594504678,0.287536413054709,0.919218786610021,0,1.53224805702225,1.38245879930619,0.923204014111357,1.09785172322892,0,0.558365998002762,1.12552522006336,1.68078072554491,1.47314292736834,1.56608848879013,1.4911955666024,1.8931548333296,1.058001841495,4.63783181922684,0.860423876981386,1.3599426674155,0.539703191637817,1.94932925234301,1.79210754838934,1.40444420131752,1.1930122580464,1.03914401841148,0.70667914902068,1.69012103732017,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,1.01104889002957,1.82694207550496,4.40194402200192,0.593768556259299,1.38788261412909,1.21786191324856,0.691846491768175,1.3565037649736,1.64624189989987,1.38233250462643,0.741584903203122,1.3013942122792,4.42305275974937,3.07357014900077,2.42925670306433,3.87900202508178,0,2.63502717310392,2.93225389538837,0.510914110417183,3.35482348616577,1.79970819298022,2.54140454146129,2.39665023047716,0.915001205637253,2.76439574648302,2.08589184230732,3.58001640262463,1.66230435647648,1.62241263067758,2.64782346010822,2.23932547098167,1.51633655060205,0.420883711772948,3.77349284591841,3.67843367093557,2.88099407688559,2.86339153887859,2.9255694635071,3.84341160854549,3.18585863503078,2.58703370739016,2.37124792226126,3.59301552318857,3.16712023495108,1.53437012699302,2.50242524303038,2.089512999133,1.4404749548556,1.39323986772945,0,2.05878325691772,2.27330799516474,2.89976081549703,2.57978665979206,3.24111710629827,2.3674473558521,2.55793501271625,2.77680803197281,2.32533944750408,2.41446061259657,1.40118410840603,1.81015834904829,1.80584210487005,1.78351381000883,1.60819986167866,1.75640092232841,1.74468344388483,1.68231958851302,3.19004298375782,0,0.793351699990633,1.91959425481711,2.78684006232526,2.19074684247559,1.61346819698674,1.33426826306922,1.90225626112559,1.42358718463353,1.4822905925161,1.75934646160189,0.198956472041151,0.38992817423824,0,1.72910439899755,1.59313018603494,0.189667900953082,2.97046132785295,2.25415471346161,2.8511185898344,1.74557238450863,2.73529697572242,1.89709611372772,1.18088118383682,1.41298855057237,1.85095745882701,1.48226313543574,3.33690211432188,3.34150291692445,2.47348323623339,1.01430060694251,1.4470629585145,2.03700681425136,1.15078454980324,1.62135226775035,2.47105271869273,2.87536413054709,0,1.5601883655728,1.01031551178845,1.25578189465339,2.8946611281802,1.29327233116623,3.41084541186873,2.77040459951444,4.41337223015489,3.05097322775053,2.68010011906905,2.85652369063216,2.73187107000918,2.52216230569906,2.43611158613652,2.07291199254733,1.80249646187312,1.89953480052485,1.73578870297814,3.01582567878545,7.61467957346193,1.47529281905711,2.20749397043786,2.0871576698413,2.46144541843627,0.655739781506702,1.76729649043061,0.94652465824877,2.73307121007647,1.50796378412959,1.19484398976276,2.00518806674155,0.566153061577665,2.83367491172426,1.75353514746787,1.97643888973262,0.963963949265421,1.84522110770749,1.24645922567079,1.95464351224291,1.97964147567043,0,1.94224508923985,0.906970670894253,1.50884063804718,0.885905678642318,0.614870295887855,1.55056975900933,1.81766864738753,3.20847640546249,0.632073515871632,2.10837217149998,0,1.70219802876894,3.6012218806262,0.646793418913773,2.57204442037911,3.90148514013002,1.60531935841864,2.46823530903181,0,2.58138878870081,1.69465656691056,1.10264199027481,2.4732937941222,2.58343082713449,2.65376869683886,1.67121281604391,2.1338316966858,0.582961673259701,1.66882771809459,2.39219233116994,1.65109494370578,3.51869602002452,2.0720530270516,2.7338845544205,2.51655990527175,3.39956859987711,3.77868921273877,2.3493995546752,0.954670618015114,2.05618395827738,2.43983360552218,2.37611749807963,1.67270636811575,1.52853794622324,1.75323650300267,1.57041565878138,1.57053565190418,1.29614973291793,1.24267862617385,0.56369293868419,2.0932316446157,0.992750942742586,1.94451188344048,1.80823752868824,1.520605129417,2.347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| |||
|short_description=p3@Tgs1 | |||
}} |
Revision as of 09:59, 5 August 2015
Short description: | p3@Tgs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tgs1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENSMUST00000132518_5end |
EntrezGene: | 116940 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 3.38e-09 | 43 |
primordium | 3.49e-09 | 134 |
craniocervical region | 1.19e-08 | 36 |
hemopoietic organ | 2.45e-08 | 29 |
immune organ | 2.45e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 7.52e-08 | 35 |
lateral plate mesoderm | 8.29e-08 | 87 |
thymus | 1.29e-07 | 23 |
neck | 1.29e-07 | 23 |
respiratory system epithelium | 1.29e-07 | 23 |
hemolymphoid system gland | 1.29e-07 | 23 |
pharyngeal epithelium | 1.29e-07 | 23 |
thymic region | 1.29e-07 | 23 |
pharyngeal gland | 1.29e-07 | 23 |
entire pharyngeal arch endoderm | 1.29e-07 | 23 |
thymus primordium | 1.29e-07 | 23 |
early pharyngeal endoderm | 1.29e-07 | 23 |
hematopoietic system | 3.91e-07 | 45 |
blood island | 3.91e-07 | 45 |
respiratory tract | 4.77e-07 | 41 |
gland of gut | 4.90e-07 | 24 |
pharynx | 5.50e-07 | 24 |
upper respiratory tract | 5.50e-07 | 24 |
chordate pharynx | 5.50e-07 | 24 |
pharyngeal arch system | 5.50e-07 | 24 |
pharyngeal region of foregut | 5.50e-07 | 24 |