FFCP PHASE1:Mm9::chr2:84726596..84726598,-: Difference between revisions
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{{FFCP|EntrezGene=269295|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=34bp_to_ENSMUST00000151759_5end|description=CAGE_peak_5_at_Rtn4rl2_5end|id=chr2:84726596..84726598,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!5.33e-27!49;UBERON:0000033!6.78e-27!63;UBERON:0000956!1.37e-26!21;UBERON:0001869!1.37e-26!21;UBERON:0000203!1.37e-26!21;UBERON:0002791!6.50e-25!29;UBERON:0003528!6.50e-25!29;UBERON:0001893!6.50e-25!29;UBERON:0002020!8.84e-23!34;UBERON:0002021!7.15e-22!10;UBERON:0000411!7.15e-22!10;UBERON:0001950!7.15e-22!10;UBERON:0002780!2.60e-21!39;UBERON:0001890!2.60e-21!39;UBERON:0006240!2.60e-21!39;UBERON:0000955!6.95e-21!50;UBERON:0006238!6.95e-21!50;UBERON:0003080!1.23e-20!40;UBERON:0002619!1.38e-19!17;UBERON:0002616!2.25e-19!49;UBERON:0004121!6.16e-19!102;UBERON:0000924!6.16e-19!102;UBERON:0006601!6.16e-19!102;UBERON:0001017!4.87e-18!73;UBERON:0005743!4.87e-18!73;UBERON:0002346!6.06e-18!71;UBERON:0003075!6.06e-18!71;UBERON:0007284!6.06e-18!71;UBERON:0007811!1.30e-17!86;UBERON:0000073!2.31e-17!75;UBERON:0001016!2.31e-17!75;UBERON:0001049!3.75e-16!52;UBERON:0005068!3.75e-16!52;UBERON:0006241!3.75e-16!52;UBERON:0007135!3.75e-16!52;UBERON:0000153!1.88e-15!94;UBERON:0000970!3.98e-07!9;UBERON:0000019!3.98e-07!9;UBERON:0000047!3.98e-07!9;UBERON:0004088!3.98e-07!9;UBERON:0002104!3.98e-07!9;UBERON:0001456!3.98e-07!9;UBERON:0003072!3.98e-07!9;UBERON:0003071!3.98e-07!9;UBERON:0004128!3.98e-07!9;UBERON:0000020!6.45e-07!12;UBERON:0001032!6.45e-07!12;UBERON:0004456!6.45e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.25e-20,10;UBERON:0000411,2.25e-20,10;UBERON:0001950,2.25e-20,10;UBERON:0000956,3.01e-15,21;UBERON:0001869,3.01e-15,21;UBERON:0000203,3.01e-15,21;UBERON:0001851,2.06e-13,1;UBERON:0005889,2.06e-13,1;UBERON:0002619,3.24e-12,17;UBERON:0003528,3.88e-11,29;UBERON:0002791,3.88e-11,29;UBERON:0001893,3.88e-11,29;UBERON:0002020,1.53e-09,34;UBERON:0002780,2.37e-08,39;UBERON:0001890,2.37e-08,39;UBERON:0006240,2.37e-08,39;UBERON:0003080,3.78e-08,40;UBERON:0002616,4.10e-07,46;UBERON:0000955,5.75e-07,47;UBERON:0006238,5.75e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0.210324961351382,0.285650984403804,0,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,2.60736480288415,1.02286182932132,0,0.324482526135515,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Rtn4rl2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269295 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENSMUST00000151759_5end | |||
|cluster_id=chr2:84726596..84726598,- | |||
|description=CAGE_peak_5_at_Rtn4rl2_5end | |||
|id=chr2:84726596..84726598,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.33e-27!49;UBERON:0000033!6.78e-27!63;UBERON:0000956!1.37e-26!21;UBERON:0001869!1.37e-26!21;UBERON:0000203!1.37e-26!21;UBERON:0002791!6.50e-25!29;UBERON:0003528!6.50e-25!29;UBERON:0001893!6.50e-25!29;UBERON:0002020!8.84e-23!34;UBERON:0002021!7.15e-22!10;UBERON:0000411!7.15e-22!10;UBERON:0001950!7.15e-22!10;UBERON:0002780!2.60e-21!39;UBERON:0001890!2.60e-21!39;UBERON:0006240!2.60e-21!39;UBERON:0000955!6.95e-21!50;UBERON:0006238!6.95e-21!50;UBERON:0003080!1.23e-20!40;UBERON:0002619!1.38e-19!17;UBERON:0002616!2.25e-19!49;UBERON:0004121!6.16e-19!102;UBERON:0000924!6.16e-19!102;UBERON:0006601!6.16e-19!102;UBERON:0001017!4.87e-18!73;UBERON:0005743!4.87e-18!73;UBERON:0002346!6.06e-18!71;UBERON:0003075!6.06e-18!71;UBERON:0007284!6.06e-18!71;UBERON:0007811!1.30e-17!86;UBERON:0000073!2.31e-17!75;UBERON:0001016!2.31e-17!75;UBERON:0001049!3.75e-16!52;UBERON:0005068!3.75e-16!52;UBERON:0006241!3.75e-16!52;UBERON:0007135!3.75e-16!52;UBERON:0000153!1.88e-15!94;UBERON:0000970!3.98e-07!9;UBERON:0000019!3.98e-07!9;UBERON:0000047!3.98e-07!9;UBERON:0004088!3.98e-07!9;UBERON:0002104!3.98e-07!9;UBERON:0001456!3.98e-07!9;UBERON:0003072!3.98e-07!9;UBERON:0003071!3.98e-07!9;UBERON:0004128!3.98e-07!9;UBERON:0000020!6.45e-07!12;UBERON:0001032!6.45e-07!12;UBERON:0004456!6.45e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.25e-20,10;UBERON:0000411,2.25e-20,10;UBERON:0001950,2.25e-20,10;UBERON:0000956,3.01e-15,21;UBERON:0001869,3.01e-15,21;UBERON:0000203,3.01e-15,21;UBERON:0001851,2.06e-13,1;UBERON:0005889,2.06e-13,1;UBERON:0002619,3.24e-12,17;UBERON:0003528,3.88e-11,29;UBERON:0002791,3.88e-11,29;UBERON:0001893,3.88e-11,29;UBERON:0002020,1.53e-09,34;UBERON:0002780,2.37e-08,39;UBERON:0001890,2.37e-08,39;UBERON:0006240,2.37e-08,39;UBERON:0003080,3.78e-08,40;UBERON:0002616,4.10e-07,46;UBERON:0000955,5.75e-07,47;UBERON:0006238,5.75e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0.210324961351382,0.285650984403804,0,0.122490799214954,0,0,0,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,2.60736480288415,1.02286182932132,0,0.324482526135515,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Rtn4rl2 | |||
}} |
Revision as of 14:21, 5 August 2015
Short description: | p5@Rtn4rl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rtn4rl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 34bp_to_ENSMUST00000151759_5end |
EntrezGene: | 269295 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.25e-20 | 10 |
visual cortex | 2.25e-20 | 10 |
neocortex | 2.25e-20 | 10 |
cerebral cortex | 3.01e-15 | 21 |
cerebral hemisphere | 3.01e-15 | 21 |
pallium | 3.01e-15 | 21 |
cortex | 2.06e-13 | 1 |
zygote cortex | 2.06e-13 | 1 |
regional part of cerebral cortex | 3.24e-12 | 17 |
brain grey matter | 3.88e-11 | 29 |
regional part of telencephalon | 3.88e-11 | 29 |
telencephalon | 3.88e-11 | 29 |
gray matter | 1.53e-09 | 34 |
regional part of forebrain | 2.37e-08 | 39 |
forebrain | 2.37e-08 | 39 |
future forebrain | 2.37e-08 | 39 |
anterior neural tube | 3.78e-08 | 40 |
regional part of brain | 4.10e-07 | 46 |
brain | 5.75e-07 | 47 |
future brain | 5.75e-07 | 47 |