FFCP PHASE1:Mm9::chr15:78675302..78675304,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78675302..78675304,-|id=chr15:78675302..78675304,-|ontology_enrichment_celltype=CL:0002563!1.97e-18!9;CL:0002251!1.97e-18!9;CL:0000066!3.45e-17!25;CL:0002250!5.03e-15!3;CL:0002076!7.25e-11!15;CL:0000223!7.76e-11!20;CL:0000063!3.94e-08!66;CL:0000239!1.77e-07!6;CL:0000677!1.77e-07!6;CL:0000212!1.77e-07!6;CL:0000584!1.77e-07!6;CL:0002321!1.85e-07!70;CL:0000220!1.85e-07!70;CL:0000473!3.46e-07!3;CL:0000627!3.46e-07!3;CL:0000682!3.46e-07!3;CL:0000215!4.56e-07!3|ontology_enrichment_celltype_v019_2=CL:0002250,1.70e-39,3;CL:0000213,1.10e-29,1;CL:0002078,1.10e-29,1;CL:0000115,1.10e-29,1;CL:0002262,1.10e-29,1;CL:1000398,1.10e-29,1;CL:0000223,4.59e-14,20;CL:0002563,4.91e-14,9;CL:0002251,4.91e-14,9;CL:0000066,1.80e-11,25;CL:0000215,7.15e-11,3;CL:0002076,7.04e-09,15;CL:0000182,4.77e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!5.74e-20!11;UBERON:0003350!1.97e-18!9;UBERON:0004808!1.97e-18!9;UBERON:0001277!1.97e-18!9;UBERON:0001242!1.29e-12!13;UBERON:0000060!1.29e-12!13;UBERON:0001262!1.29e-12!13;UBERON:0004786!1.29e-12!13;UBERON:0000344!7.25e-11!15|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.10e-29,1;UBERON:0001281,1.10e-29,1;UBERON:0000353,1.10e-29,1;UBERON:0003497,1.10e-29,1;UBERON:0003909,1.10e-29,1;UBERON:0003928,1.10e-29,1;UBERON:0003835,1.10e-29,1;UBERON:0003513,1.10e-29,1;UBERON:0001280,1.10e-29,1;UBERON:0004647,1.10e-29,1;UBERON:0002294,1.10e-29,1;UBERON:0001173,1.10e-29,1;UBERON:0004912,1.10e-29,1;UBERON:0005171,1.10e-29,1;UBERON:0003350,4.91e-14,9;UBERON:0004808,4.91e-14,9;UBERON:0001277,4.91e-14,9;UBERON:0000485,1.07e-11,11;UBERON:0001242,4.49e-10,13;UBERON:0001262,4.49e-10,13;UBERON:0004786,4.49e-10,13;UBERON:0000344,7.04e-09,15;UBERON:0000055,4.77e-07,5;UBERON:0007500,4.77e-07,5;UBERON:0001981,4.77e-07,5;UBERON:0002049,4.77e-07,5;UBERON:0007798,4.77e-07,5;UBERON:0004537,4.77e-07,5;UBERON:0006965,4.77e-07,5|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.503637815735669,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86152399231815,0.861884930743556,0,0,0,0,0,0,5.48818077527422,0.831173226792462,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.302286240427142,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:78675302..78675304,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:78675302..78675304,- | |||
|description=CAGE_peak_at_chr15:78675302..78675304,- | |||
|id=chr15:78675302..78675304,- | |||
|ontology_enrichment_celltype=CL:0002563!1.97e-18!9;CL:0002251!1.97e-18!9;CL:0000066!3.45e-17!25;CL:0002250!5.03e-15!3;CL:0002076!7.25e-11!15;CL:0000223!7.76e-11!20;CL:0000063!3.94e-08!66;CL:0000239!1.77e-07!6;CL:0000677!1.77e-07!6;CL:0000212!1.77e-07!6;CL:0000584!1.77e-07!6;CL:0002321!1.85e-07!70;CL:0000220!1.85e-07!70;CL:0000473!3.46e-07!3;CL:0000627!3.46e-07!3;CL:0000682!3.46e-07!3;CL:0000215!4.56e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.70e-39,3;CL:0000213,1.10e-29,1;CL:0002078,1.10e-29,1;CL:0000115,1.10e-29,1;CL:0002262,1.10e-29,1;CL:1000398,1.10e-29,1;CL:0000223,4.59e-14,20;CL:0002563,4.91e-14,9;CL:0002251,4.91e-14,9;CL:0000066,1.80e-11,25;CL:0000215,7.15e-11,3;CL:0002076,7.04e-09,15;CL:0000182,4.77e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!5.74e-20!11;UBERON:0003350!1.97e-18!9;UBERON:0004808!1.97e-18!9;UBERON:0001277!1.97e-18!9;UBERON:0001242!1.29e-12!13;UBERON:0000060!1.29e-12!13;UBERON:0001262!1.29e-12!13;UBERON:0004786!1.29e-12!13;UBERON:0000344!7.25e-11!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.10e-29,1;UBERON:0001281,1.10e-29,1;UBERON:0000353,1.10e-29,1;UBERON:0003497,1.10e-29,1;UBERON:0003909,1.10e-29,1;UBERON:0003928,1.10e-29,1;UBERON:0003835,1.10e-29,1;UBERON:0003513,1.10e-29,1;UBERON:0001280,1.10e-29,1;UBERON:0004647,1.10e-29,1;UBERON:0002294,1.10e-29,1;UBERON:0001173,1.10e-29,1;UBERON:0004912,1.10e-29,1;UBERON:0005171,1.10e-29,1;UBERON:0003350,4.91e-14,9;UBERON:0004808,4.91e-14,9;UBERON:0001277,4.91e-14,9;UBERON:0000485,1.07e-11,11;UBERON:0001242,4.49e-10,13;UBERON:0001262,4.49e-10,13;UBERON:0004786,4.49e-10,13;UBERON:0000344,7.04e-09,15;UBERON:0000055,4.77e-07,5;UBERON:0007500,4.77e-07,5;UBERON:0001981,4.77e-07,5;UBERON:0002049,4.77e-07,5;UBERON:0007798,4.77e-07,5;UBERON:0004537,4.77e-07,5;UBERON:0006965,4.77e-07,5 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.503637815735669,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86152399231815,0.861884930743556,0,0,0,0,0,0,5.48818077527422,0.831173226792462,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.302286240427142,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:78675302..78675304,- | |||
}} |
Latest revision as of 14:47, 5 August 2015
Short description: | p@chr15:78675302..78675304, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78675302..78675304, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.70e-39 | 3 |
lining cell | 1.10e-29 | 1 |
meso-epithelial cell | 1.10e-29 | 1 |
endothelial cell | 1.10e-29 | 1 |
endothelial cell of sinusoid | 1.10e-29 | 1 |
endothelial cell of hepatic sinusoid | 1.10e-29 | 1 |
endodermal cell | 4.59e-14 | 20 |
intestinal epithelial cell | 4.91e-14 | 9 |
epithelial cell of alimentary canal | 4.91e-14 | 9 |
epithelial cell | 1.80e-11 | 25 |
barrier cell | 7.15e-11 | 3 |
endo-epithelial cell | 7.04e-09 | 15 |
hepatocyte | 4.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.10e-29 | 1 |
hepatic sinusoid | 1.10e-29 | 1 |
parenchyma | 1.10e-29 | 1 |
abdomen blood vessel | 1.10e-29 | 1 |
sinusoid | 1.10e-29 | 1 |
digestive system duct | 1.10e-29 | 1 |
abdominal segment blood vessel | 1.10e-29 | 1 |
trunk blood vessel | 1.10e-29 | 1 |
liver parenchyma | 1.10e-29 | 1 |
liver lobule | 1.10e-29 | 1 |
biliary system | 1.10e-29 | 1 |
biliary tree | 1.10e-29 | 1 |
biliary bud | 1.10e-29 | 1 |
hepatic duct | 1.10e-29 | 1 |
epithelium of mucosa | 4.91e-14 | 9 |
gastrointestinal system epithelium | 4.91e-14 | 9 |
intestinal epithelium | 4.91e-14 | 9 |
simple columnar epithelium | 1.07e-11 | 11 |
intestinal mucosa | 4.49e-10 | 13 |
wall of intestine | 4.49e-10 | 13 |
gastrointestinal system mucosa | 4.49e-10 | 13 |
mucosa | 7.04e-09 | 15 |
vessel | 4.77e-07 | 5 |
epithelial tube open at both ends | 4.77e-07 | 5 |
blood vessel | 4.77e-07 | 5 |
vasculature | 4.77e-07 | 5 |
vascular system | 4.77e-07 | 5 |
blood vasculature | 4.77e-07 | 5 |
vascular cord | 4.77e-07 | 5 |