FFCP PHASE1:Mm9::chr9:76429468..76429481,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:76429468..76429481,-|id=chr9:76429468..76429481,-|ontology_enrichment_celltype=CL:0000239!2.35e-12!6;CL:0000677!2.35e-12!6;CL:0000212!2.35e-12!6;CL:0000584!2.35e-12!6;CL:0000075!1.84e-10!7;CL:0002563!6.13e-08!9;CL:0002251!6.13e-08!9;CL:0000473!2.23e-07!3;CL:0000627!2.23e-07!3;CL:0000682!2.23e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,2.25e-13,6;CL:0000677,2.25e-13,6;CL:0000584,2.25e-13,6;CL:0000075,2.01e-11,7;CL:0000682,1.20e-10,3;CL:0002563,8.12e-09,9;CL:0002251,8.12e-09,9;CL:0000066,3.48e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.27e-31!59;UBERON:0000160!1.63e-28!43;UBERON:0000344!1.98e-17!15;UBERON:0001242!3.81e-14!13;UBERON:0000060!3.81e-14!13;UBERON:0001262!3.81e-14!13;UBERON:0004786!3.81e-14!13;UBERON:0001007!8.62e-14!128;UBERON:0001555!8.62e-14!128;UBERON:0007026!8.62e-14!128;UBERON:0004119!1.94e-13!130;UBERON:0000925!1.94e-13!130;UBERON:0006595!1.94e-13!130;UBERON:0004921!4.94e-12!126;UBERON:0004185!4.94e-12!126;UBERON:0004923!8.47e-10!24;UBERON:0003350!6.13e-08!9;UBERON:0004808!6.13e-08!9;UBERON:0001277!6.13e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.59e-45,31;UBERON:0005409,5.30e-31,47;UBERON:0000344,3.98e-19,15;UBERON:0001242,1.95e-14,13;UBERON:0001262,1.95e-14,13;UBERON:0004786,1.95e-14,13;UBERON:0001007,3.41e-12,116;UBERON:0001555,3.41e-12,116;UBERON:0007026,3.41e-12,116;UBERON:0004119,6.64e-12,118;UBERON:0000925,6.64e-12,118;UBERON:0006595,6.64e-12,118;UBERON:0004923,2.81e-11,24;UBERON:0004921,4.27e-10,114;UBERON:0003350,8.12e-09,9;UBERON:0004808,8.12e-09,9;UBERON:0001277,8.12e-09,9;UBERON:0002108,2.78e-07,4;UBERON:0000485,3.73e-07,11;UBERON:0001962,6.53e-07,2;UBERON:0001961,6.53e-07,2;UBERON:0001744,6.53e-07,2|phase1_expression=0,18.4956966048861,19.5649672937501,3.93203474698879,3.50627010962443,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.2940928106717,12.6331032105304,5.59990595006797,7.75696437669201,0.950117097281869,1.51218077855958,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,3.96675849995316,0,0.232236671860439,1.54640953586512,2.62188582010345,1.11189021922435,1.14135375667535,9.01605216934572,0.164698954724011,1.50801125280162,1.98956472041151,2.33956904542944,3.59527763461689,11.6714546932335,10.3553462092271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,6.73997861117323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr9:76429468..76429481,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:76429468..76429481,- | |||
|description=CAGE_peak_at_chr9:76429468..76429481,- | |||
|id=chr9:76429468..76429481,- | |||
|ontology_enrichment_celltype=CL:0000239!2.35e-12!6;CL:0000677!2.35e-12!6;CL:0000212!2.35e-12!6;CL:0000584!2.35e-12!6;CL:0000075!1.84e-10!7;CL:0002563!6.13e-08!9;CL:0002251!6.13e-08!9;CL:0000473!2.23e-07!3;CL:0000627!2.23e-07!3;CL:0000682!2.23e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.25e-13,6;CL:0000677,2.25e-13,6;CL:0000584,2.25e-13,6;CL:0000075,2.01e-11,7;CL:0000682,1.20e-10,3;CL:0002563,8.12e-09,9;CL:0002251,8.12e-09,9;CL:0000066,3.48e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.27e-31!59;UBERON:0000160!1.63e-28!43;UBERON:0000344!1.98e-17!15;UBERON:0001242!3.81e-14!13;UBERON:0000060!3.81e-14!13;UBERON:0001262!3.81e-14!13;UBERON:0004786!3.81e-14!13;UBERON:0001007!8.62e-14!128;UBERON:0001555!8.62e-14!128;UBERON:0007026!8.62e-14!128;UBERON:0004119!1.94e-13!130;UBERON:0000925!1.94e-13!130;UBERON:0006595!1.94e-13!130;UBERON:0004921!4.94e-12!126;UBERON:0004185!4.94e-12!126;UBERON:0004923!8.47e-10!24;UBERON:0003350!6.13e-08!9;UBERON:0004808!6.13e-08!9;UBERON:0001277!6.13e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.59e-45,31;UBERON:0005409,5.30e-31,47;UBERON:0000344,3.98e-19,15;UBERON:0001242,1.95e-14,13;UBERON:0001262,1.95e-14,13;UBERON:0004786,1.95e-14,13;UBERON:0001007,3.41e-12,116;UBERON:0001555,3.41e-12,116;UBERON:0007026,3.41e-12,116;UBERON:0004119,6.64e-12,118;UBERON:0000925,6.64e-12,118;UBERON:0006595,6.64e-12,118;UBERON:0004923,2.81e-11,24;UBERON:0004921,4.27e-10,114;UBERON:0003350,8.12e-09,9;UBERON:0004808,8.12e-09,9;UBERON:0001277,8.12e-09,9;UBERON:0002108,2.78e-07,4;UBERON:0000485,3.73e-07,11;UBERON:0001962,6.53e-07,2;UBERON:0001961,6.53e-07,2;UBERON:0001744,6.53e-07,2 | |||
|phase1_expression=0,18.4956966048861,19.5649672937501,3.93203474698879,3.50627010962443,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.2940928106717,12.6331032105304,5.59990595006797,7.75696437669201,0.950117097281869,1.51218077855958,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,3.96675849995316,0,0.232236671860439,1.54640953586512,2.62188582010345,1.11189021922435,1.14135375667535,9.01605216934572,0.164698954724011,1.50801125280162,1.98956472041151,2.33956904542944,3.59527763461689,11.6714546932335,10.3553462092271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,6.73997861117323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:76429468..76429481,- | |||
}} |
Latest revision as of 15:51, 5 August 2015
Short description: | p@chr9:76429468..76429481, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:76429468..76429481, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.25e-13 | 6 |
gut absorptive cell | 2.25e-13 | 6 |
enterocyte | 2.25e-13 | 6 |
columnar/cuboidal epithelial cell | 2.01e-11 | 7 |
M cell of gut | 1.20e-10 | 3 |
intestinal epithelial cell | 8.12e-09 | 9 |
epithelial cell of alimentary canal | 8.12e-09 | 9 |
epithelial cell | 3.48e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.59e-45 | 31 |
gastrointestinal system | 5.30e-31 | 47 |
mucosa | 3.98e-19 | 15 |
intestinal mucosa | 1.95e-14 | 13 |
wall of intestine | 1.95e-14 | 13 |
gastrointestinal system mucosa | 1.95e-14 | 13 |
digestive system | 3.41e-12 | 116 |
digestive tract | 3.41e-12 | 116 |
primitive gut | 3.41e-12 | 116 |
endoderm-derived structure | 6.64e-12 | 118 |
endoderm | 6.64e-12 | 118 |
presumptive endoderm | 6.64e-12 | 118 |
organ component layer | 2.81e-11 | 24 |
subdivision of digestive tract | 4.27e-10 | 114 |
epithelium of mucosa | 8.12e-09 | 9 |
gastrointestinal system epithelium | 8.12e-09 | 9 |
intestinal epithelium | 8.12e-09 | 9 |
small intestine | 2.78e-07 | 4 |
simple columnar epithelium | 3.73e-07 | 11 |
gut-associated lymphoid tissue | 6.53e-07 | 2 |
mucosa-associated lymphoid tissue | 6.53e-07 | 2 |
lymphoid tissue | 6.53e-07 | 2 |