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FFCP PHASE1:Mm9::chr13:24923569..24923590,+: Difference between revisions

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{{FFCP|EntrezGene=56196|HGNC=|UniProt=Q9JJX7|association_with_transcript=21bp_to_ENSMUST00000038039,uc007pwk.1_5end|description=CAGE_peak_2_at_Tdp2_5end|id=chr13:24923569..24923590,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!8.21e-12!128;UBERON:0001555!8.21e-12!128;UBERON:0007026!8.21e-12!128;UBERON:0004119!1.54e-11!130;UBERON:0000925!1.54e-11!130;UBERON:0006595!1.54e-11!130;UBERON:0004921!3.40e-11!126;UBERON:0004185!3.40e-11!126;UBERON:0005911!2.59e-08!69;UBERON:0000344!4.28e-08!15;UBERON:0003929!6.47e-08!55;UBERON:0001242!1.53e-07!13;UBERON:0000060!1.53e-07!13;UBERON:0001262!1.53e-07!13;UBERON:0004786!1.53e-07!13;UBERON:0004923!2.21e-07!24;UBERON:0000485!3.62e-07!11;UBERON:0005409!4.25e-07!59;UBERON:0004177!5.26e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.27e-13,116;UBERON:0001555,2.27e-13,116;UBERON:0007026,2.27e-13,116;UBERON:0004119,4.82e-13,118;UBERON:0000925,4.82e-13,118;UBERON:0006595,4.82e-13,118;UBERON:0004921,1.02e-12,114;UBERON:0005409,2.40e-09,47;UBERON:0000160,1.27e-08,31;UBERON:0005911,2.40e-08,69;UBERON:0000344,4.27e-08,15;UBERON:0003929,5.97e-08,55;UBERON:0007811,1.49e-07,36;UBERON:0001242,1.53e-07,13;UBERON:0001262,1.53e-07,13;UBERON:0004786,1.53e-07,13;UBERON:0004923,2.20e-07,24;UBERON:0000485,3.61e-07,11;UBERON:0004177,4.60e-07,29;UBERON:0005057,4.60e-07,29|phase1_expression=5.92550734287738,9.42233600626275,10.4649825059593,9.37639055051173,15.0268718983904,6.88305014838748,5.60670337429262,8.26389270026088,5.490760163915,7.0219357896598,3.5955773327356,4.14815226775749,5.30722262786738,6.7313709862628,3.99731714178795,4.04950534779652,4.19737126876888,5.99378114180652,6.58149281307546,5.94145512517242,3.74190476664707,6.55320277925843,5.74639536105658,4.63978026100879,6.19405058881359,6.31655160526522,6.03066794622705,7.11055067863434,6.27077284206034,7.81293402255785,3.76941868114018,2.54012269383853,1.84519436275371,0,9.53210345179206,5.81821258754723,7.55426618170766,0.837063261473815,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,2.42755176515577,2.26614272356039,1.21652317463417,1.28482726513177,0,0.872100625521786,0.659058548203415,1.74986909166855,0.139986421625363,1.43752564364972,5.87239121202077,7.97898356212479,10.4189077734164,3.34437266846731,1.43266719969378,1.54701627683233,1.82084814773638,1.5869729378161,0,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,3.11068836925433,1.4850653216486,2.52389953621658,0.856952953211411,1.98781686856452,3.30725157880376,2.39613677545591,2.75765635983006,2.20231761998777,2.42605942361857,1.22885226604995,2.37395317914349,1.9212405156506,1.04182674111352,1.3959149950069,1.68828783009504,1.5279824777681,1.17851434189467,2.27794689278565,2.05039390407831,1.8931548333296,2.41828992341714,2.31891590961342,4.30211938490693,1.3599426674155,2.15881276655127,2.59910566979068,2.68816132258401,2.94933282276679,1.87473354835864,1.55871602761721,2.47337702157238,4.92951969218382,3.84979432242953,0,0,3.68034769719064,2.02687892380079,3.0331466700887,4.68153906848146,1.8125651855302,1.92974780784272,2.94925055502431,5.78484408793068,3.22861696158482,3.61734337326294,5.05631440683531,4.14699751387929,3.21353458054686,2.31358971071859,4.42305275974937,3.72063754879041,3.3126227769059,2.42437626567611,3.72783522436244,3.51336956413857,5.02672096352292,4.59822699375465,6.82946209683746,5.39912457894067,5.84523044536098,2.84602214869163,0.457500602818626,3.01570445070875,2.25971616249959,3.83573185995496,1.45451631191692,2.59586020908412,4.48093200941392,4.47865094196335,2.27450482590307,3.15662783829711,5.72529949035896,4.59804208866946,4.32149111532838,4.52114453507145,6.73561341598146,4.48398020996974,4.2165776051878,3.10444044886819,5.17363183038821,3.59301552318857,2.99116911078713,2.6303487891309,2.50242524303038,1.39300866608867,2.88094990971121,4.17971960318836,9.12877143507205,3.3455227924913,8.24074148247219,4.97101854085205,1.64168241986767,4.8616756594474,2.13070262026689,4.9191057936851,5.707883176833,3.0229412817553,3.48755421819505,3.61972561338225,4.60767579757745,3.94001913789829,3.16168357228837,3.07019973593198,2.41505126820156,4.42881181909227,3.36463917702604,2.98423375899925,4.95628174475697,5.02456076660734,5.97207101498655,4.87697010906921,3.73715637834071,5.04208811558356,4.44756087689741,4.94586627892654,2.84717436926707,2.9645811850322,4.52403375840485,7.36138946552258,3.70431765526328,2.69645822596266,4.32276099749388,7.76650965692032,3.60369011810855,4.91268604221834,6.76246414038483,3.46207257337034,4.07300223052014,4.62896411276103,3.79419222745544,3.39503340353085,4.08196692387575,5.92306386824642,3.85388415213294,4.83850806576673,3.73462090715086,3.82265591054251,4.86864291332407,3.61765739628625,4.58326533206556,3.74004978686054,4.21551589615092,3.56929837144506,1.43768206527355,3.72140947668503,2.80833905803104,5.05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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56196
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9JJX7
|association_with_transcript=21bp_to_ENSMUST00000038039,uc007pwk.1_5end
|cluster_id=chr13:24923569..24923590,+
|description=CAGE_peak_2_at_Tdp2_5end
|id=chr13:24923569..24923590,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.27e-13,116;UBERON:0001555,2.27e-13,116;UBERON:0007026,2.27e-13,116;UBERON:0004119,4.82e-13,118;UBERON:0000925,4.82e-13,118;UBERON:0006595,4.82e-13,118;UBERON:0004921,1.02e-12,114;UBERON:0005409,2.40e-09,47;UBERON:0000160,1.27e-08,31;UBERON:0005911,2.40e-08,69;UBERON:0000344,4.27e-08,15;UBERON:0003929,5.97e-08,55;UBERON:0007811,1.49e-07,36;UBERON:0001242,1.53e-07,13;UBERON:0001262,1.53e-07,13;UBERON:0004786,1.53e-07,13;UBERON:0004923,2.20e-07,24;UBERON:0000485,3.61e-07,11;UBERON:0004177,4.60e-07,29;UBERON:0005057,4.60e-07,29
|phase1_expression=5.92550734287738,9.42233600626275,10.4649825059593,9.37639055051173,15.0268718983904,6.88305014838748,5.60670337429262,8.26389270026088,5.490760163915,7.0219357896598,3.5955773327356,4.14815226775749,5.30722262786738,6.7313709862628,3.99731714178795,4.04950534779652,4.19737126876888,5.99378114180652,6.58149281307546,5.94145512517242,3.74190476664707,6.55320277925843,5.74639536105658,4.63978026100879,6.19405058881359,6.31655160526522,6.03066794622705,7.11055067863434,6.27077284206034,7.81293402255785,3.76941868114018,2.54012269383853,1.84519436275371,0,9.53210345179206,5.81821258754723,7.55426618170766,0.837063261473815,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,2.42755176515577,2.26614272356039,1.21652317463417,1.28482726513177,0,0.872100625521786,0.659058548203415,1.74986909166855,0.139986421625363,1.43752564364972,5.87239121202077,7.97898356212479,10.4189077734164,3.34437266846731,1.43266719969378,1.54701627683233,1.82084814773638,1.5869729378161,0,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,3.11068836925433,1.4850653216486,2.52389953621658,0.856952953211411,1.98781686856452,3.30725157880376,2.39613677545591,2.75765635983006,2.20231761998777,2.42605942361857,1.22885226604995,2.37395317914349,1.9212405156506,1.04182674111352,1.3959149950069,1.68828783009504,1.5279824777681,1.17851434189467,2.27794689278565,2.05039390407831,1.8931548333296,2.41828992341714,2.31891590961342,4.30211938490693,1.3599426674155,2.15881276655127,2.59910566979068,2.68816132258401,2.94933282276679,1.87473354835864,1.55871602761721,2.47337702157238,4.92951969218382,3.84979432242953,0,0,3.68034769719064,2.02687892380079,3.0331466700887,4.68153906848146,1.8125651855302,1.92974780784272,2.94925055502431,5.78484408793068,3.22861696158482,3.61734337326294,5.05631440683531,4.14699751387929,3.21353458054686,2.31358971071859,4.42305275974937,3.72063754879041,3.3126227769059,2.42437626567611,3.72783522436244,3.51336956413857,5.02672096352292,4.59822699375465,6.82946209683746,5.39912457894067,5.84523044536098,2.84602214869163,0.457500602818626,3.01570445070875,2.25971616249959,3.83573185995496,1.45451631191692,2.59586020908412,4.48093200941392,4.47865094196335,2.27450482590307,3.15662783829711,5.72529949035896,4.59804208866946,4.32149111532838,4.52114453507145,6.73561341598146,4.48398020996974,4.2165776051878,3.10444044886819,5.17363183038821,3.59301552318857,2.99116911078713,2.6303487891309,2.50242524303038,1.39300866608867,2.88094990971121,4.17971960318836,9.12877143507205,3.3455227924913,8.24074148247219,4.97101854085205,1.64168241986767,4.8616756594474,2.13070262026689,4.9191057936851,5.707883176833,3.0229412817553,3.48755421819505,3.61972561338225,4.60767579757745,3.94001913789829,3.16168357228837,3.07019973593198,2.41505126820156,4.42881181909227,3.36463917702604,2.98423375899925,4.95628174475697,5.02456076660734,5.97207101498655,4.87697010906921,3.73715637834071,5.04208811558356,4.44756087689741,4.94586627892654,2.84717436926707,2.9645811850322,4.52403375840485,7.36138946552258,3.70431765526328,2.69645822596266,4.32276099749388,7.76650965692032,3.60369011810855,4.91268604221834,6.76246414038483,3.46207257337034,4.07300223052014,4.62896411276103,3.79419222745544,3.39503340353085,4.08196692387575,5.92306386824642,3.85388415213294,4.83850806576673,3.73462090715086,3.82265591054251,4.86864291332407,3.61765739628625,4.58326533206556,3.74004978686054,4.21551589615092,3.56929837144506,1.43768206527355,3.72140947668503,2.80833905803104,5.05157755894223,6.27890947326693,5.78932225636041,2.40179147216586,4.9267767060326,3.91115943460862,5.09235257325564,4.45911471748154,3.85264392116176,2.61848004974615,4.68320754858717,4.57141917907954,6.64394068946325,3.50800491046472,1.80249646187312,3.10832967358612,4.77341893318988,3.01582567878545,1.08781136763742,1.96705709207614,1.10374698521893,2.56880943980467,2.34423373184406,2.13115428989678,3.53459298086122,3.47059041357882,2.73307121007647,2.36965737506079,2.86762557543062,3.7875774594007,3.11384183867716,2.83367491172426,2.63030272120181,2.76701444562566,1.28528526568723,3.40656204499845,2.67098405500883,4.0721739838394,1.64970122972535,1.32745138339963,4.12727081463468,4.53485335447127,3.58349651536206,1.47650946440386,2.45948118355142,4.39328098385976,4.36240475373007,4.63446591900138,2.52829406348653,2.10837217149998,2.06271086496374,2.04263763452273,4.50152735078276,2.97524972700335,4.07240366560025,2.12808280370728,2.49716344642899,4.60737257685939,2.74018454203139,2.58138878870081,3.38931313382112,0.661585194164886,2.4732937941222,4.19807509409354,3.79971427047382,2.626191568069,2.29797259643086,4.66369338607761,1.48340241608408,4.10090113914846,3.30218988741156,5.37064129372164,5.65105371014073,5.33107488111998,4.11800711771741,8.15896463970505,8.81694149639045,6.35719879500349,1.90934123603023,4.58687190692646,2.23651413839534,4.75223499615926,3.3454127362315,4.58561383866973,4.5853877770839,3.80205896336545,4.97336289769656,5.18459893167171,5.59205381778233,10.7101658349996,4.63501292736334,3.47462829959905,4.66682852025714,1.29159823477731,2.70329800785245,5.28107573905893,4.29674469985035,2.9360616439199,8.93861247056222,9.79302021276743,4.10814456816632,4.45995473638361,5.03283690107653,7.40548690973432,6.62398773969681,6.35780335300048,6.85114062263822,8.4183030489509,6.5628192466296,7.62068066549998,6.25122347848411,6.23730436734416,7.02346443974405,5.61009130471531,2.26730383615211,2.66383144048878,4.21655126064536,2.68615386182526,3.09103350451505,2.25218970541418,2.56412273974171,2.57242054894879,2.00628841614145,2.25900737046827,1.84130094602871,0,2.06223818812425,1.37016503954128,2.2661816921691,0.675022500231806,1.80128481289688,1.35942722695261,1.55328093525546,6.95375228813984,2.39414924040619,3.24393850932855,2.43106717068294,2.51535795153579,4.96377472815038,2.889207461421,4.53277125925567,2.56735367673452,4.04315538822076,2.02783439912192,3.39527414494937,3.09016974650612,4.03358460150676,4.07791829584854,4.28664322154766,3.1288768005111,2.50781986602817,2.88460130562315,2.06078488188156,3.42869252385415,2.66213709239006,5.00715998889374,2.18019624948493,3.10560955370591,2.70766745253365,2.74391959309159,2.36762740294059,3.53090695999241,0.561142271657738,2.72860541685601,3.05363895364247,3.27384834535751,3.40861050609125,3.47231899766054,1.74867404556562,2.8071793013449,3.22306581072447,2.29545998482612,2.42650561031467,2.78241402744506
|short_description=p2@Tdp2
}}

Revision as of 20:22, 5 August 2015

Short description:p2@Tdp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tdp2_5end
Coexpression cluster:NA
Association with transcript: 21bp_to_ENSMUST00000038039, uc007pwk.1_5end
EntrezGene:56196
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Tdp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.85
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C66.74
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.63
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A93.80
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H38.94
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C78.42
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D37.62
thymus, neonate N10.CNhs11194.748-24E46.25
thymus, neonate N20.CNhs11186.820-7A26.24
thymus, neonate N25.CNhs11125.1362-25G77.02
thymus, neonate N30.CNhs11132.1393-42G25.61
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I86.95
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system2.27e-13116
digestive tract2.27e-13116
primitive gut2.27e-13116
endoderm-derived structure4.82e-13118
endoderm4.82e-13118
presumptive endoderm4.82e-13118
subdivision of digestive tract1.02e-12114
gastrointestinal system2.40e-0947
intestine1.27e-0831
endo-epithelium2.40e-0869
mucosa4.27e-0815
gut epithelium5.97e-0855
craniocervical region1.49e-0736
intestinal mucosa1.53e-0713
wall of intestine1.53e-0713
gastrointestinal system mucosa1.53e-0713
organ component layer2.20e-0724
simple columnar epithelium3.61e-0711
hemopoietic organ4.60e-0729
immune organ4.60e-0729
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