FFCP PHASE1:Mm9::chr6:57485362..57485389,-: Difference between revisions
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{{FFCP|EntrezGene=243382|HGNC=|MCL_coexpression_id=8|UniProt=Q8BXN7,B9EHW0|association_with_transcript=30bp_to_ENSMUST00000042766,NM_175523,uc009cch.1_5end|description=CAGE_peak_4_at_Ppm1k_5end|id=chr6:57485362..57485389,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.32e-10!22;UBERON:0007499!7.32e-10!22;UBERON:0006925!7.32e-10!22;UBERON:0009497!7.32e-10!22;UBERON:0000015!7.32e-10!22;UBERON:0002423!7.32e-10!22;UBERON:0006235!7.32e-10!22;UBERON:0008835!7.32e-10!22;UBERON:0003894!7.32e-10!22;UBERON:0004161!7.32e-10!22;UBERON:0008836!7.32e-10!22;UBERON:0002365!1.14e-09!25;UBERON:0002330!1.14e-09!25;UBERON:0009854!6.68e-09!23;UBERON:0009856!6.68e-09!23;UBERON:0009569!1.39e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.16e-16,22;UBERON:0007499,7.16e-16,22;UBERON:0006925,7.16e-16,22;UBERON:0009497,7.16e-16,22;UBERON:0000015,7.16e-16,22;UBERON:0002423,7.16e-16,22;UBERON:0006235,7.16e-16,22;UBERON:0008835,7.16e-16,22;UBERON:0003894,7.16e-16,22;UBERON:0004161,7.16e-16,22;UBERON:0008836,7.16e-16,22;UBERON:0002365,1.62e-15,25;UBERON:0002330,1.62e-15,25;UBERON:0009854,5.49e-15,23;UBERON:0009856,5.49e-15,23;UBERON:0003914,2.21e-10,47;UBERON:0009569,5.82e-09,66;UBERON:0005256,2.34e-07,45;UBERON:0000025,3.20e-07,114;UBERON:0005172,3.29e-07,49;UBERON:0005173,3.29e-07,49;UBERON:0002417,3.29e-07,49;UBERON:0000916,3.29e-07,49;UBERON:0005177,3.63e-07,79;UBERON:0005911,7.06e-07,69;UBERON:0004111,7.13e-07,122|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,1.42035655785734,0.563154888606667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.34968160967599,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0,0.425216450755349,0.595745707205312,1.04479915655574,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0,0.139986421625363,0,0.503347818173209,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0.279182999001381,0,0.45839474333043,0,0.427115042397309,0,0.075726193333184,0,1.15945795480671,6.0229671388697,0.679971333707751,15.6513925574967,17.5439632710871,15.2329141613094,2.10666630197628,0.681721290312231,1.03914401841148,0.35333957451034,0,2.56652954828636,0,0,0.216491041011214,0,0.505524445014783,2.51204535381932,1.29468941823586,0.445326417194474,0.520455980298408,1.21786191324856,1.38369298353635,0.904335843315735,0.705532242814229,0.251333182659351,0.247194967734374,3.32578520915797,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0.599902730993408,0.508280908292259,0.149790639404823,0,0.376963056338593,1.04294592115366,1.79000820131231,0.20778804455956,0.324482526135515,0.101839363850316,0.622034853050465,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.59710280045548,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,1.4592385718254,1.46199987425332,3.07370161407471,4.83143107537338,0.420579897128254,0.411618449517138,0.660837565967596,0,0,0,0.257734922644187,0,0.444756087689741,0.951128130562796,1.42358718463353,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0.784993639206874,0.740382983530803,3.26097889795864,0,0.393117990226406,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,2.87696137450811,9.07957269940198,12.6298250066517,24.4405951096503,28.2827120228063,18.4102227137591,5.55673531483646,10.4050499842709,13.5084185981743,0,0,0.162964976442026,0.169745085775188,1.17345124144251,2.51259386162724,4.28478553594825,1.75620283072019,1.89162172927429,2.6575762757853,0.637819074629948,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.08781136763742,4.91764273019036,0.551873492609465,0.642202359951168,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.709700426041343,0,0.325773918707152,0.329940245945071,1.32745138339963,0,0,0.377210159511796,0.590603785761546,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0.658196082408484,0.304464949114599,0.469343416127421,0,0.441056796109924,0.16488625294148,0.484393280087717,0.180938774784468,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0,0.418176592028937,0,0.944050424693745,1.73572257023205,0.26175594198403,0.259229946583586,0,0.56369293868419,0.598066184175915,0.827292452285488,0.777804753376191,0.516639293910924,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0,0,0.198681354781265,0.360586348559907,0,0.201932899896295,0.381034033274999,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,2.30162618253588,2.29158205375759,0.515559547031063,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.735374033800057,0.888986911206461,0,0.64183841918363,0.758091635291392,0.25347929989024,0.565879024158229,0.749132059759059,1.08842759088278,0.34461281373368,0.476293691283074,0.579421629724277,0.77163688185482,0.824171801606613,1.47198920134397,0,0.887379030796687,1.43061713968393,1.16277133305863,0.564656282491984,0.507687647350059,0.182927972872773,0.263069711437843,1.22223702461276,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0,1.63752125911786,2.14871054048298,0,0.220591419119515,0.463735671240843|short_description=p4@Ppm1k}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243382 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BXN7,uniprot:B9EHW0 | |||
|association_with_transcript=30bp_to_ENSMUST00000042766,NM_175523,uc009cch.1_5end | |||
|cluster_id=chr6:57485362..57485389,- | |||
|description=CAGE_peak_4_at_Ppm1k_5end | |||
|id=chr6:57485362..57485389,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.32e-10!22;UBERON:0007499!7.32e-10!22;UBERON:0006925!7.32e-10!22;UBERON:0009497!7.32e-10!22;UBERON:0000015!7.32e-10!22;UBERON:0002423!7.32e-10!22;UBERON:0006235!7.32e-10!22;UBERON:0008835!7.32e-10!22;UBERON:0003894!7.32e-10!22;UBERON:0004161!7.32e-10!22;UBERON:0008836!7.32e-10!22;UBERON:0002365!1.14e-09!25;UBERON:0002330!1.14e-09!25;UBERON:0009854!6.68e-09!23;UBERON:0009856!6.68e-09!23;UBERON:0009569!1.39e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.16e-16,22;UBERON:0007499,7.16e-16,22;UBERON:0006925,7.16e-16,22;UBERON:0009497,7.16e-16,22;UBERON:0000015,7.16e-16,22;UBERON:0002423,7.16e-16,22;UBERON:0006235,7.16e-16,22;UBERON:0008835,7.16e-16,22;UBERON:0003894,7.16e-16,22;UBERON:0004161,7.16e-16,22;UBERON:0008836,7.16e-16,22;UBERON:0002365,1.62e-15,25;UBERON:0002330,1.62e-15,25;UBERON:0009854,5.49e-15,23;UBERON:0009856,5.49e-15,23;UBERON:0003914,2.21e-10,47;UBERON:0009569,5.82e-09,66;UBERON:0005256,2.34e-07,45;UBERON:0000025,3.20e-07,114;UBERON:0005172,3.29e-07,49;UBERON:0005173,3.29e-07,49;UBERON:0002417,3.29e-07,49;UBERON:0000916,3.29e-07,49;UBERON:0005177,3.63e-07,79;UBERON:0005911,7.06e-07,69;UBERON:0004111,7.13e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,1.42035655785734,0.563154888606667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.34968160967599,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0,0.425216450755349,0.595745707205312,1.04479915655574,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0,0.139986421625363,0,0.503347818173209,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0.279182999001381,0,0.45839474333043,0,0.427115042397309,0,0.075726193333184,0,1.15945795480671,6.0229671388697,0.679971333707751,15.6513925574967,17.5439632710871,15.2329141613094,2.10666630197628,0.681721290312231,1.03914401841148,0.35333957451034,0,2.56652954828636,0,0,0.216491041011214,0,0.505524445014783,2.51204535381932,1.29468941823586,0.445326417194474,0.520455980298408,1.21786191324856,1.38369298353635,0.904335843315735,0.705532242814229,0.251333182659351,0.247194967734374,3.32578520915797,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0.599902730993408,0.508280908292259,0.149790639404823,0,0.376963056338593,1.04294592115366,1.79000820131231,0.20778804455956,0.324482526135515,0.101839363850316,0.622034853050465,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.59710280045548,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0.308534225774757,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,1.4592385718254,1.46199987425332,3.07370161407471,4.83143107537338,0.420579897128254,0.411618449517138,0.660837565967596,0,0,0,0.257734922644187,0,0.444756087689741,0.951128130562796,1.42358718463353,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0.784993639206874,0.740382983530803,3.26097889795864,0,0.393117990226406,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,2.87696137450811,9.07957269940198,12.6298250066517,24.4405951096503,28.2827120228063,18.4102227137591,5.55673531483646,10.4050499842709,13.5084185981743,0,0,0.162964976442026,0.169745085775188,1.17345124144251,2.51259386162724,4.28478553594825,1.75620283072019,1.89162172927429,2.6575762757853,0.637819074629948,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.08781136763742,4.91764273019036,0.551873492609465,0.642202359951168,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.709700426041343,0,0.325773918707152,0.329940245945071,1.32745138339963,0,0,0.377210159511796,0.590603785761546,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0,0.658196082408484,0.304464949114599,0.469343416127421,0,0.441056796109924,0.16488625294148,0.484393280087717,0.180938774784468,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0,0.169978429993855,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0,0.418176592028937,0,0.944050424693745,1.73572257023205,0.26175594198403,0.259229946583586,0,0.56369293868419,0.598066184175915,0.827292452285488,0.777804753376191,0.516639293910924,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0,0,0.198681354781265,0.360586348559907,0,0.201932899896295,0.381034033274999,0.302478555410522,0.292373642219257,0.0962118416403295,0.350630706544707,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,2.30162618253588,2.29158205375759,0.515559547031063,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.735374033800057,0.888986911206461,0,0.64183841918363,0.758091635291392,0.25347929989024,0.565879024158229,0.749132059759059,1.08842759088278,0.34461281373368,0.476293691283074,0.579421629724277,0.77163688185482,0.824171801606613,1.47198920134397,0,0.887379030796687,1.43061713968393,1.16277133305863,0.564656282491984,0.507687647350059,0.182927972872773,0.263069711437843,1.22223702461276,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0,1.63752125911786,2.14871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Ppm1k | |||
}} |
Revision as of 23:59, 5 August 2015
Short description: | p4@Ppm1k |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppm1k_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 30bp_to_ENSMUST00000042766, NM_175523, uc009cch.1_5end |
EntrezGene: | 243382 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 7.16e-16 | 22 |
epithelial sac | 7.16e-16 | 22 |
digestive gland | 7.16e-16 | 22 |
epithelium of foregut-midgut junction | 7.16e-16 | 22 |
anatomical boundary | 7.16e-16 | 22 |
hepatobiliary system | 7.16e-16 | 22 |
foregut-midgut junction | 7.16e-16 | 22 |
hepatic diverticulum | 7.16e-16 | 22 |
liver primordium | 7.16e-16 | 22 |
septum transversum | 7.16e-16 | 22 |
liver bud | 7.16e-16 | 22 |
exocrine gland | 1.62e-15 | 25 |
exocrine system | 1.62e-15 | 25 |
digestive tract diverticulum | 5.49e-15 | 23 |
sac | 5.49e-15 | 23 |
epithelial tube | 2.21e-10 | 47 |
subdivision of trunk | 5.82e-09 | 66 |
trunk mesenchyme | 2.34e-07 | 45 |
tube | 3.20e-07 | 114 |
abdomen element | 3.29e-07 | 49 |
abdominal segment element | 3.29e-07 | 49 |
abdominal segment of trunk | 3.29e-07 | 49 |
abdomen | 3.29e-07 | 49 |
trunk region element | 3.63e-07 | 79 |
endo-epithelium | 7.06e-07 | 69 |
anatomical conduit | 7.13e-07 | 122 |