FFCP PHASE1:Mm9::chr5:110715062..110715071,-: Difference between revisions
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{{FFCP|EntrezGene=19301|HGNC=|MCL_coexpression_id=8|UniProt=D6REH1|association_with_transcript=-22bp_to_ENSMUST00000155266_5end|description=CAGE_peak_3_at_Pxmp2_5end|id=chr5:110715062..110715071,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.09e-12!22;UBERON:0007499!1.09e-12!22;UBERON:0006925!1.09e-12!22;UBERON:0009497!1.09e-12!22;UBERON:0000015!1.09e-12!22;UBERON:0002423!1.09e-12!22;UBERON:0006235!1.09e-12!22;UBERON:0008835!1.09e-12!22;UBERON:0003894!1.09e-12!22;UBERON:0004161!1.09e-12!22;UBERON:0008836!1.09e-12!22;UBERON:0003914!2.38e-12!47;UBERON:0009854!1.46e-11!23;UBERON:0009856!1.46e-11!23;UBERON:0002365!2.24e-10!25;UBERON:0002330!2.24e-10!25;UBERON:0005172!8.68e-08!49;UBERON:0005173!8.68e-08!49;UBERON:0002417!8.68e-08!49;UBERON:0000916!8.68e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.29e-24,47;UBERON:0002107,3.87e-23,22;UBERON:0007499,3.87e-23,22;UBERON:0006925,3.87e-23,22;UBERON:0009497,3.87e-23,22;UBERON:0000015,3.87e-23,22;UBERON:0002423,3.87e-23,22;UBERON:0006235,3.87e-23,22;UBERON:0008835,3.87e-23,22;UBERON:0003894,3.87e-23,22;UBERON:0004161,3.87e-23,22;UBERON:0008836,3.87e-23,22;UBERON:0009854,6.80e-22,23;UBERON:0009856,6.80e-22,23;UBERON:0002365,1.05e-19,25;UBERON:0002330,1.05e-19,25;UBERON:0005172,5.09e-15,49;UBERON:0005173,5.09e-15,49;UBERON:0002417,5.09e-15,49;UBERON:0000916,5.09e-15,49;UBERON:0000025,9.54e-12,114;UBERON:0004111,4.29e-11,122;UBERON:0003104,9.86e-11,61;UBERON:0009142,9.86e-11,61;UBERON:0009569,2.29e-10,66;UBERON:0005256,1.05e-09,45;UBERON:0003929,8.89e-09,55;UBERON:0005177,2.74e-08,79;UBERON:0003103,1.45e-07,43;UBERON:0000483,4.87e-07,174;UBERON:0000119,7.67e-07,176;UBERON:0002368,8.49e-07,60|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,0.30246421130683,0,1.17515490338323,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0,2.04103896362567,0,0,0.639969691173627,1.14704640533585,0,0.430761996159075,1.29282739611533,0.570070258369122,1.51218077855958,0.665191531965914,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0.782391344348039,1.52617609466313,1.5378032791413,2.13872888981712,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,1.92109152660777,0,0,0,1.14260393761521,1.10434270475807,0.122490799214954,0.191690942036473,0,3.30347642998166,0.383062014255563,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,1.06958773443767,0,0.284743361598206,0,0,0,0,9.46466264679525,7.47968467078526,14.0322829825832,16.8941868536394,12.0967259516281,2.80888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,5.1382745873577,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,2.74738778147832,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0,0,0.254140454146129,0.449371918214468,0,0.251308704225729,0.347648640384553,0.767146371990992,0.83115217823824,0.162241263067758,0.101839363850316,0.124406970610093,1.26361379216837,0,0.390361328888111,0.459804208866946,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0.257347907114715,0.568326998791185,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,1.54267112887378,1.62773761325285,1.87791380979733,2.21854150497622,0.493679549740441,1.97000956894914,2.1888578577381,2.48539978623065,2.85415149878366,3.48936688776967,0,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.456994050438915,0,0.610953983535943,0.387904974335251,1.61312385747733,3.09859031908861,3.54264355151045,3.61097074035162,3.57851775373222,7.11486305009157,0.667380422864376,0.589676985339609,0.899448449539415,1.21716072833102,2.17059443777175,1.01850340712568,2.01387296215567,5.5125977103512,8.23684239564244,5.75072826109418,8.93138274404408,10.2972432127805,13.1341016532498,12.3784215330119,12.5435315554475,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0,1.36593553500459,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0,0.433947175744535,0,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,1.36175842301515,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0,0.164549020602121,1.2178597964584,0,0,0,0.49465875882444,0.16146442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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19301 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6REH1 | |||
|association_with_transcript=-22bp_to_ENSMUST00000155266_5end | |||
|cluster_id=chr5:110715062..110715071,- | |||
|description=CAGE_peak_3_at_Pxmp2_5end | |||
|id=chr5:110715062..110715071,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.09e-12!22;UBERON:0007499!1.09e-12!22;UBERON:0006925!1.09e-12!22;UBERON:0009497!1.09e-12!22;UBERON:0000015!1.09e-12!22;UBERON:0002423!1.09e-12!22;UBERON:0006235!1.09e-12!22;UBERON:0008835!1.09e-12!22;UBERON:0003894!1.09e-12!22;UBERON:0004161!1.09e-12!22;UBERON:0008836!1.09e-12!22;UBERON:0003914!2.38e-12!47;UBERON:0009854!1.46e-11!23;UBERON:0009856!1.46e-11!23;UBERON:0002365!2.24e-10!25;UBERON:0002330!2.24e-10!25;UBERON:0005172!8.68e-08!49;UBERON:0005173!8.68e-08!49;UBERON:0002417!8.68e-08!49;UBERON:0000916!8.68e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.29e-24,47;UBERON:0002107,3.87e-23,22;UBERON:0007499,3.87e-23,22;UBERON:0006925,3.87e-23,22;UBERON:0009497,3.87e-23,22;UBERON:0000015,3.87e-23,22;UBERON:0002423,3.87e-23,22;UBERON:0006235,3.87e-23,22;UBERON:0008835,3.87e-23,22;UBERON:0003894,3.87e-23,22;UBERON:0004161,3.87e-23,22;UBERON:0008836,3.87e-23,22;UBERON:0009854,6.80e-22,23;UBERON:0009856,6.80e-22,23;UBERON:0002365,1.05e-19,25;UBERON:0002330,1.05e-19,25;UBERON:0005172,5.09e-15,49;UBERON:0005173,5.09e-15,49;UBERON:0002417,5.09e-15,49;UBERON:0000916,5.09e-15,49;UBERON:0000025,9.54e-12,114;UBERON:0004111,4.29e-11,122;UBERON:0003104,9.86e-11,61;UBERON:0009142,9.86e-11,61;UBERON:0009569,2.29e-10,66;UBERON:0005256,1.05e-09,45;UBERON:0003929,8.89e-09,55;UBERON:0005177,2.74e-08,79;UBERON:0003103,1.45e-07,43;UBERON:0000483,4.87e-07,174;UBERON:0000119,7.67e-07,176;UBERON:0002368,8.49e-07,60 | |||
|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,0.30246421130683,0,1.17515490338323,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0,2.04103896362567,0,0,0.639969691173627,1.14704640533585,0,0.430761996159075,1.29282739611533,0.570070258369122,1.51218077855958,0.665191531965914,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0.782391344348039,1.52617609466313,1.5378032791413,2.13872888981712,0.839918529752175,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,1.92109152660777,0,0,0,1.14260393761521,1.10434270475807,0.122490799214954,0.191690942036473,0,3.30347642998166,0.383062014255563,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,1.06958773443767,0,0.284743361598206,0,0,0,0,9.46466264679525,7.47968467078526,14.0322829825832,16.8941868536394,12.0967259516281,2.80888840263504,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,5.1382745873577,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,2.74738778147832,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0,0,0.254140454146129,0.449371918214468,0,0.251308704225729,0.347648640384553,0.767146371990992,0.83115217823824,0.162241263067758,0.101839363850316,0.124406970610093,1.26361379216837,0,0.390361328888111,0.459804208866946,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0.257347907114715,0.568326998791185,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,1.54267112887378,1.62773761325285,1.87791380979733,2.21854150497622,0.493679549740441,1.97000956894914,2.1888578577381,2.48539978623065,2.85415149878366,3.48936688776967,0,0.205809224758569,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.456994050438915,0,0.610953983535943,0.387904974335251,1.61312385747733,3.09859031908861,3.54264355151045,3.61097074035162,3.57851775373222,7.11486305009157,0.667380422864376,0.589676985339609,0.899448449539415,1.21716072833102,2.17059443777175,1.01850340712568,2.01387296215567,5.5125977103512,8.23684239564244,5.75072826109418,8.93138274404408,10.2972432127805,13.1341016532498,12.3784215330119,12.5435315554475,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0,1.36593553500459,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0,0.433947175744535,0,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,1.36175842301515,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0,0.164549020602121,1.2178597964584,0,0,0,0.49465875882444,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,1.48776220305605,0.523511883968059,0.90730481304255,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.352071715937262,0.5208175393758,0.524296722128554,0.483168241652012,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,0.367687016900028,0,0.206035057238894,0,0,0.50695859978048,0.754505365544305,0.37456602987953,0.448176066834085,0.516919220600519,0.476293691283074,0.927074607558844,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.564656282491984,0.423073039458382,0.548783918618318,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0.859484216193193,0.956441660344217,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Pxmp2 | |||
}} |
Revision as of 00:29, 6 August 2015
Short description: | p3@Pxmp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pxmp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -22bp_to_ENSMUST00000155266_5end |
EntrezGene: | 19301 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.29e-24 | 47 |
liver | 3.87e-23 | 22 |
epithelial sac | 3.87e-23 | 22 |
digestive gland | 3.87e-23 | 22 |
epithelium of foregut-midgut junction | 3.87e-23 | 22 |
anatomical boundary | 3.87e-23 | 22 |
hepatobiliary system | 3.87e-23 | 22 |
foregut-midgut junction | 3.87e-23 | 22 |
hepatic diverticulum | 3.87e-23 | 22 |
liver primordium | 3.87e-23 | 22 |
septum transversum | 3.87e-23 | 22 |
liver bud | 3.87e-23 | 22 |
digestive tract diverticulum | 6.80e-22 | 23 |
sac | 6.80e-22 | 23 |
exocrine gland | 1.05e-19 | 25 |
exocrine system | 1.05e-19 | 25 |
abdomen element | 5.09e-15 | 49 |
abdominal segment element | 5.09e-15 | 49 |
abdominal segment of trunk | 5.09e-15 | 49 |
abdomen | 5.09e-15 | 49 |
tube | 9.54e-12 | 114 |
anatomical conduit | 4.29e-11 | 122 |
mesenchyme | 9.86e-11 | 61 |
entire embryonic mesenchyme | 9.86e-11 | 61 |
subdivision of trunk | 2.29e-10 | 66 |
trunk mesenchyme | 1.05e-09 | 45 |
gut epithelium | 8.89e-09 | 55 |
trunk region element | 2.74e-08 | 79 |
compound organ | 1.45e-07 | 43 |
epithelium | 4.87e-07 | 174 |
cell layer | 7.67e-07 | 176 |
endocrine gland | 8.49e-07 | 60 |