FFCP PHASE1:Mm9::chr6:69893682..69893694,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=180|UniProt=|association_with_transcript=-40bp_to_ENSMUST00000103371_5end|description=CAGE_peak_1_at_ENSMUST00000103371_5end|id=chr6:69893682..69893694,-|ontology_enrichment_celltype=CL:0000553!1.59e-14!6;CL:0000556!1.59e-14!6;CL:0000050!2.04e-09!9;CL:0002027!6.97e-08!3;CL:0002006!6.97e-08!3;CL:0002024!6.97e-08!3;CL:0000414!1.47e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,7.27e-18,6;CL:0000556,7.27e-18,6;CL:0000050,7.32e-12,9;CL:0000839,3.76e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.52e-11!51;UBERON:0002193!1.81e-10!48;UBERON:0002465!7.69e-09!3;UBERON:0002390!4.83e-07!45;UBERON:0003061!4.83e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.32e-14,3;UBERON:0001962,2.45e-10,2;UBERON:0001961,2.45e-10,2;UBERON:0001744,2.45e-10,2;UBERON:0001155,4.51e-10,2;UBERON:0000059,4.51e-10,2;UBERON:0002193,3.36e-09,48;UBERON:0002405,3.36e-09,48;UBERON:0007023,1.18e-08,51;UBERON:0004923,5.56e-08,24;UBERON:0002106,9.43e-07,6;UBERON:0004457,9.43e-07,6;UBERON:0000042,9.43e-07,6;UBERON:0004854,9.43e-07,6;UBERON:0009034,9.43e-07,6;UBERON:0002095,9.43e-07,6;UBERON:0004782,9.43e-07,6;UBERON:0003281,9.43e-07,6;UBERON:0009664,9.43e-07,6;UBERON:0002296,9.43e-07,6;UBERON:0005602,9.43e-07,6;UBERON:0001179,9.43e-07,6;UBERON:0006293,9.43e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33042690360362,18.2227740650843,0.699561878128147,6.30924330716475,7.95263714913285,12.3072999021429,0.680346321208558,0,0,214.869823811545,148.198395569392,0,0,0,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.02765491747154,57.4842101696721,0.445326417194474,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,35.4144346314432,0,0,39.3403865021231,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,12.6936271998501,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.4093106693058,0,0,0.565105371014073,1.0935538217682,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.481059208201647,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p1@ENSMUST00000103371}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=180 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENSMUST00000103371_5end | |||
|cluster_id=chr6:69893682..69893694,- | |||
|description=CAGE_peak_1_at_ENSMUST00000103371_5end | |||
|id=chr6:69893682..69893694,- | |||
|ontology_enrichment_celltype=CL:0000553!1.59e-14!6;CL:0000556!1.59e-14!6;CL:0000050!2.04e-09!9;CL:0002027!6.97e-08!3;CL:0002006!6.97e-08!3;CL:0002024!6.97e-08!3;CL:0000414!1.47e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.27e-18,6;CL:0000556,7.27e-18,6;CL:0000050,7.32e-12,9;CL:0000839,3.76e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.52e-11!51;UBERON:0002193!1.81e-10!48;UBERON:0002465!7.69e-09!3;UBERON:0002390!4.83e-07!45;UBERON:0003061!4.83e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.32e-14,3;UBERON:0001962,2.45e-10,2;UBERON:0001961,2.45e-10,2;UBERON:0001744,2.45e-10,2;UBERON:0001155,4.51e-10,2;UBERON:0000059,4.51e-10,2;UBERON:0002193,3.36e-09,48;UBERON:0002405,3.36e-09,48;UBERON:0007023,1.18e-08,51;UBERON:0004923,5.56e-08,24;UBERON:0002106,9.43e-07,6;UBERON:0004457,9.43e-07,6;UBERON:0000042,9.43e-07,6;UBERON:0004854,9.43e-07,6;UBERON:0009034,9.43e-07,6;UBERON:0002095,9.43e-07,6;UBERON:0004782,9.43e-07,6;UBERON:0003281,9.43e-07,6;UBERON:0009664,9.43e-07,6;UBERON:0002296,9.43e-07,6;UBERON:0005602,9.43e-07,6;UBERON:0001179,9.43e-07,6;UBERON:0006293,9.43e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33042690360362,18.2227740650843,0.699561878128147,6.30924330716475,7.95263714913285,12.3072999021429,0.680346321208558,0,0,214.869823811545,148.198395569392,0,0,0,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.02765491747154,57.4842101696721,0.445326417194474,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,35.4144346314432,0,0,39.3403865021231,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,12.6936271998501,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.4093106693058,0,0,0.565105371014073,1.0935538217682,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.481059208201647,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000103371 | |||
}} |
Latest revision as of 01:33, 6 August 2015
Short description: | p1@ENSMUST00000103371 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103371_5end |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | -40bp_to_ENSMUST00000103371_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.27e-18 | 6 |
megakaryocyte | 7.27e-18 | 6 |
megakaryocyte-erythroid progenitor cell | 7.32e-12 | 9 |
myeloid lineage restricted progenitor cell | 3.76e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.32e-14 | 3 |
gut-associated lymphoid tissue | 2.45e-10 | 2 |
mucosa-associated lymphoid tissue | 2.45e-10 | 2 |
lymphoid tissue | 2.45e-10 | 2 |
colon | 4.51e-10 | 2 |
large intestine | 4.51e-10 | 2 |
hemolymphoid system | 3.36e-09 | 48 |
immune system | 3.36e-09 | 48 |
adult organism | 1.18e-08 | 51 |
organ component layer | 5.56e-08 | 24 |
spleen | 9.43e-07 | 6 |
cavity lining | 9.43e-07 | 6 |
serous membrane | 9.43e-07 | 6 |
gastrointestinal system mesentery | 9.43e-07 | 6 |
stomach region | 9.43e-07 | 6 |
mesentery | 9.43e-07 | 6 |
gastrointestinal system serosa | 9.43e-07 | 6 |
mesentery of stomach | 9.43e-07 | 6 |
gut mesentery | 9.43e-07 | 6 |
dorsal mesentery | 9.43e-07 | 6 |
dorsal mesogastrium | 9.43e-07 | 6 |
peritoneal cavity | 9.43e-07 | 6 |
spleen primordium | 9.43e-07 | 6 |