FFCP PHASE1:Mm9::chr18:75160143..75160153,+: Difference between revisions
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{{FFCP|EntrezGene=100042880,319195|HGNC=|MCL_coexpression_id=1129|UniProt=Q6ZWZ7|association_with_transcript=12bp_to_ENSMUST00000079716,NM_001002239,uc008fpw.2_5end|description=CAGE_peak_4_at_Gm10294_5end,CAGE_peak_4_at_Rpl17_5end|id=chr18:75160143..75160153,+|ontology_enrichment_celltype=CL:0000063!2.35e-21!66;CL:0000144!4.51e-16!121;CL:0000012!4.51e-16!121;CL:0000988!1.72e-14!32;CL:0002032!1.72e-14!32;CL:0000037!1.72e-14!32;CL:0000566!1.72e-14!32;CL:0000837!1.72e-14!32;CL:0000548!2.08e-14!115;CL:0000004!2.08e-14!115;CL:0000255!2.08e-14!115;CL:0002320!8.85e-14!46;CL:0000134!8.85e-14!46;CL:0002371!8.93e-14!118;CL:0000219!1.23e-13!54;CL:0000034!1.75e-11!97;CL:0000049!2.08e-10!19;CL:0002031!2.37e-10!25;CL:0002076!1.25e-07!15;CL:0000763!1.93e-07!16;CL:0000723!2.92e-07!91;CL:0000048!2.92e-07!91;CL:0000893!3.95e-07!6;CL:0002489!3.95e-07!6;CL:0000898!3.95e-07!6;CL:0000809!3.95e-07!6;CL:0000810!3.95e-07!6;CL:0000895!3.95e-07!6;CL:0000808!3.95e-07!6;CL:0000894!3.95e-07!6;CL:0000806!3.95e-07!6;CL:0000807!3.95e-07!6;CL:0000805!3.95e-07!6;CL:0002425!3.95e-07!6;CL:0002436!3.95e-07!6;CL:0002427!3.95e-07!6;CL:0002428!3.95e-07!6;CL:0002429!3.95e-07!6;CL:0002433!3.95e-07!6;CL:0002431!3.95e-07!6;CL:0002432!3.95e-07!6;CL:0000066!6.79e-07!25|ontology_enrichment_celltype_v019_2=CL:0000349,1.44e-14,3;CL:0000351,1.44e-14,3;CL:0000068,6.07e-14,3;CL:0002202,6.07e-14,3;CL:0000069,6.07e-14,3;CL:0002632,6.07e-14,3;CL:0002368,6.07e-14,3;CL:0000307,6.07e-14,3;CL:0000377,6.07e-14,3;CL:0000217,2.02e-10,2;CL:0000328,2.02e-10,2;CL:0002573,2.02e-10,2;CL:0002376,2.02e-10,2;CL:0000218,2.02e-10,2;CL:0000692,2.02e-10,2;CL:0002377,2.02e-10,2;CL:0002375,2.02e-10,2;CL:0000215,3.23e-07,3;CL:0002027,5.23e-07,3;CL:0002006,5.23e-07,3;CL:0002024,5.23e-07,3;CL:0000219,6.46e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.85e-14!46;UBERON:0000344!3.88e-11!15;UBERON:0001242!1.37e-08!13;UBERON:0000060!1.37e-08!13;UBERON:0001262!1.37e-08!13;UBERON:0004786!1.37e-08!13;UBERON:0004923!3.71e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.44e-14,3;UBERON:0000307,1.44e-14,3;UBERON:0007010,1.44e-14,3;UBERON:0003126,6.07e-14,3;UBERON:0001005,6.07e-14,3;UBERON:0007196,6.07e-14,3;UBERON:0001558,6.07e-14,3|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.839396359559449,0.700837921786577,0,0.422366166455,0.468129052643987,4.79410311031414,2.47293692885543,0.513602189793617,0,0,3.23960427823721,1.39912375625629,0,0.685572168028694,0.84877930359606,0,0,0.522399578277871,0.639969691173627,1.37645568640302,0,0,0.646413698057667,1.33016393619462,0.252030129759931,0.886922042621219,0.635030673459631,0,0,0.288851619751275,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,4.92220256665696,1.96486056277642,0.289864488701678,0.860423876981386,0,0,0,0,0,0,1.03914401841148,1.7666978725517,0,0,0,0,1.94841936910093,3.04031838570118,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21985953374065,2.15313255862742,2.68615386182526,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Gm10294,p4@Rpl17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100042880,entrezgene:319195 | |||
|HGNC= | |||
|MCL_coexpression_id=1129 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZWZ7 | |||
|association_with_transcript=12bp_to_ENSMUST00000079716,NM_001002239,uc008fpw.2_5end | |||
|cluster_id=chr18:75160143..75160153,+ | |||
|description=CAGE_peak_4_at_Gm10294_5end,CAGE_peak_4_at_Rpl17_5end | |||
|id=chr18:75160143..75160153,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.35e-21!66;CL:0000144!4.51e-16!121;CL:0000012!4.51e-16!121;CL:0000988!1.72e-14!32;CL:0002032!1.72e-14!32;CL:0000037!1.72e-14!32;CL:0000566!1.72e-14!32;CL:0000837!1.72e-14!32;CL:0000548!2.08e-14!115;CL:0000004!2.08e-14!115;CL:0000255!2.08e-14!115;CL:0002320!8.85e-14!46;CL:0000134!8.85e-14!46;CL:0002371!8.93e-14!118;CL:0000219!1.23e-13!54;CL:0000034!1.75e-11!97;CL:0000049!2.08e-10!19;CL:0002031!2.37e-10!25;CL:0002076!1.25e-07!15;CL:0000763!1.93e-07!16;CL:0000723!2.92e-07!91;CL:0000048!2.92e-07!91;CL:0000893!3.95e-07!6;CL:0002489!3.95e-07!6;CL:0000898!3.95e-07!6;CL:0000809!3.95e-07!6;CL:0000810!3.95e-07!6;CL:0000895!3.95e-07!6;CL:0000808!3.95e-07!6;CL:0000894!3.95e-07!6;CL:0000806!3.95e-07!6;CL:0000807!3.95e-07!6;CL:0000805!3.95e-07!6;CL:0002425!3.95e-07!6;CL:0002436!3.95e-07!6;CL:0002427!3.95e-07!6;CL:0002428!3.95e-07!6;CL:0002429!3.95e-07!6;CL:0002433!3.95e-07!6;CL:0002431!3.95e-07!6;CL:0002432!3.95e-07!6;CL:0000066!6.79e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.44e-14,3;CL:0000351,1.44e-14,3;CL:0000068,6.07e-14,3;CL:0002202,6.07e-14,3;CL:0000069,6.07e-14,3;CL:0002632,6.07e-14,3;CL:0002368,6.07e-14,3;CL:0000307,6.07e-14,3;CL:0000377,6.07e-14,3;CL:0000217,2.02e-10,2;CL:0000328,2.02e-10,2;CL:0002573,2.02e-10,2;CL:0002376,2.02e-10,2;CL:0000218,2.02e-10,2;CL:0000692,2.02e-10,2;CL:0002377,2.02e-10,2;CL:0002375,2.02e-10,2;CL:0000215,3.23e-07,3;CL:0002027,5.23e-07,3;CL:0002006,5.23e-07,3;CL:0002024,5.23e-07,3;CL:0000219,6.46e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.85e-14!46;UBERON:0000344!3.88e-11!15;UBERON:0001242!1.37e-08!13;UBERON:0000060!1.37e-08!13;UBERON:0001262!1.37e-08!13;UBERON:0004786!1.37e-08!13;UBERON:0004923!3.71e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.44e-14,3;UBERON:0000307,1.44e-14,3;UBERON:0007010,1.44e-14,3;UBERON:0003126,6.07e-14,3;UBERON:0001005,6.07e-14,3;UBERON:0007196,6.07e-14,3;UBERON:0001558,6.07e-14,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.839396359559449,0.700837921786577,0,0.422366166455,0.468129052643987,4.79410311031414,2.47293692885543,0.513602189793617,0,0,3.23960427823721,1.39912375625629,0,0.685572168028694,0.84877930359606,0,0,0.522399578277871,0.639969691173627,1.37645568640302,0,0,0.646413698057667,1.33016393619462,0.252030129759931,0.886922042621219,0.635030673459631,0,0,0.288851619751275,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,4.92220256665696,1.96486056277642,0.289864488701678,0.860423876981386,0,0,0,0,0,0,1.03914401841148,1.7666978725517,0,0,0,0,1.94841936910093,3.04031838570118,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21985953374065,2.15313255862742,2.68615386182526,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Gm10294,p4@Rpl17 | |||
}} |
Revision as of 03:10, 6 August 2015
Short description: | p4@Gm10294, p4@Rpl17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gm10294_5end, CAGE_peak_4_at_Rpl17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1129 |
Association with transcript: | 12bp_to_ENSMUST00000079716, NM_001002239, uc008fpw.2_5end |
EntrezGene: | 100042880,319195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.44e-14 | 3 |
trophoblast cell | 1.44e-14 | 3 |
duct epithelial cell | 6.07e-14 | 3 |
epithelial cell of tracheobronchial tree | 6.07e-14 | 3 |
branched duct epithelial cell | 6.07e-14 | 3 |
epithelial cell of lower respiratory tract | 6.07e-14 | 3 |
respiratory epithelial cell | 6.07e-14 | 3 |
tracheal epithelial cell | 6.07e-14 | 3 |
tracheoblast | 6.07e-14 | 3 |
insulating cell | 2.02e-10 | 2 |
myelin accumulating cell | 2.02e-10 | 2 |
Schwann cell | 2.02e-10 | 2 |
non-myelinating Schwann cell | 2.02e-10 | 2 |
myelinating Schwann cell;;Schwann cell | 2.02e-10 | 2 |
terminal Schwann cell | 2.02e-10 | 2 |
immature Schwann cell | 2.02e-10 | 2 |
Schwann cell precursor | 2.02e-10 | 2 |
barrier cell | 3.23e-07 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 5.23e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.23e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.23e-07 | 3 |
motile cell | 6.46e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.44e-14 | 3 |
blastula | 1.44e-14 | 3 |
cleaving embryo | 1.44e-14 | 3 |
trachea | 6.07e-14 | 3 |
respiratory airway | 6.07e-14 | 3 |
tracheobronchial tree | 6.07e-14 | 3 |
lower respiratory tract | 6.07e-14 | 3 |