FFCP PHASE1:Mm9::chr1:89921716..89921733,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=196|UniProt=|association_with_transcript=-52bp_to_ENSMUST00000119510_5end|description=CAGE_peak_1_at_ENSMUST00000119510_5end|id=chr1:89921716..89921733,+|ontology_enrichment_celltype=CL:0000181!6.08e-12!5;CL:0000417!6.08e-12!5;CL:0000668!6.08e-12!5;CL:0000412!6.08e-12!5;CL:0000182!6.08e-12!5|ontology_enrichment_celltype_v019_2=CL:0000182,4.39e-35,5;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1;CL:0000223,3.81e-09,20;CL:0000066,2.18e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.80e-21!22;UBERON:0007499!5.80e-21!22;UBERON:0006925!5.80e-21!22;UBERON:0009497!5.80e-21!22;UBERON:0000015!5.80e-21!22;UBERON:0002423!5.80e-21!22;UBERON:0006235!5.80e-21!22;UBERON:0008835!5.80e-21!22;UBERON:0003894!5.80e-21!22;UBERON:0004161!5.80e-21!22;UBERON:0008836!5.80e-21!22;UBERON:0009854!5.98e-20!23;UBERON:0009856!5.98e-20!23;UBERON:0002365!3.65e-18!25;UBERON:0002330!3.65e-18!25;UBERON:0005256!4.53e-10!47;UBERON:0005172!1.49e-09!49;UBERON:0005173!1.49e-09!49;UBERON:0002417!1.49e-09!49;UBERON:0000916!1.49e-09!49;UBERON:0003914!1.46e-08!47;UBERON:0005057!1.04e-07!51;UBERON:0002368!2.45e-07!60;UBERON:0003929!5.57e-07!55;UBERON:0000949!9.39e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.11e-31,22;UBERON:0007499,1.11e-31,22;UBERON:0006925,1.11e-31,22;UBERON:0009497,1.11e-31,22;UBERON:0000015,1.11e-31,22;UBERON:0002423,1.11e-31,22;UBERON:0006235,1.11e-31,22;UBERON:0008835,1.11e-31,22;UBERON:0003894,1.11e-31,22;UBERON:0004161,1.11e-31,22;UBERON:0008836,1.11e-31,22;UBERON:0009854,2.59e-30,23;UBERON:0009856,2.59e-30,23;UBERON:0002365,6.66e-28,25;UBERON:0002330,6.66e-28,25;UBERON:0005256,1.53e-15,45;UBERON:0003914,7.01e-15,47;UBERON:0005172,2.84e-14,49;UBERON:0005173,2.84e-14,49;UBERON:0002417,2.84e-14,49;UBERON:0000916,2.84e-14,49;UBERON:0003929,1.03e-12,55;UBERON:0002368,1.19e-11,60;UBERON:0003104,1.85e-11,61;UBERON:0009142,1.85e-11,61;UBERON:0002530,9.47e-11,65;UBERON:0000490,1.38e-10,66;UBERON:0009569,1.38e-10,66;UBERON:0005911,4.02e-10,69;UBERON:0000949,1.07e-09,72;UBERON:0005177,7.96e-09,79;UBERON:0001041,1.03e-08,80;UBERON:0002100,9.97e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,3.39985666853875,1.61910957491345,2.59910566979068,4.03224198387602,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.858105083486,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,5.56131981917928,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p1@ENSMUST00000119510}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=196 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-52bp_to_ENSMUST00000119510_5end | |||
|cluster_id=chr1:89921716..89921733,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000119510_5end | |||
|id=chr1:89921716..89921733,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.08e-12!5;CL:0000417!6.08e-12!5;CL:0000668!6.08e-12!5;CL:0000412!6.08e-12!5;CL:0000182!6.08e-12!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.39e-35,5;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1;CL:0000223,3.81e-09,20;CL:0000066,2.18e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.80e-21!22;UBERON:0007499!5.80e-21!22;UBERON:0006925!5.80e-21!22;UBERON:0009497!5.80e-21!22;UBERON:0000015!5.80e-21!22;UBERON:0002423!5.80e-21!22;UBERON:0006235!5.80e-21!22;UBERON:0008835!5.80e-21!22;UBERON:0003894!5.80e-21!22;UBERON:0004161!5.80e-21!22;UBERON:0008836!5.80e-21!22;UBERON:0009854!5.98e-20!23;UBERON:0009856!5.98e-20!23;UBERON:0002365!3.65e-18!25;UBERON:0002330!3.65e-18!25;UBERON:0005256!4.53e-10!47;UBERON:0005172!1.49e-09!49;UBERON:0005173!1.49e-09!49;UBERON:0002417!1.49e-09!49;UBERON:0000916!1.49e-09!49;UBERON:0003914!1.46e-08!47;UBERON:0005057!1.04e-07!51;UBERON:0002368!2.45e-07!60;UBERON:0003929!5.57e-07!55;UBERON:0000949!9.39e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.11e-31,22;UBERON:0007499,1.11e-31,22;UBERON:0006925,1.11e-31,22;UBERON:0009497,1.11e-31,22;UBERON:0000015,1.11e-31,22;UBERON:0002423,1.11e-31,22;UBERON:0006235,1.11e-31,22;UBERON:0008835,1.11e-31,22;UBERON:0003894,1.11e-31,22;UBERON:0004161,1.11e-31,22;UBERON:0008836,1.11e-31,22;UBERON:0009854,2.59e-30,23;UBERON:0009856,2.59e-30,23;UBERON:0002365,6.66e-28,25;UBERON:0002330,6.66e-28,25;UBERON:0005256,1.53e-15,45;UBERON:0003914,7.01e-15,47;UBERON:0005172,2.84e-14,49;UBERON:0005173,2.84e-14,49;UBERON:0002417,2.84e-14,49;UBERON:0000916,2.84e-14,49;UBERON:0003929,1.03e-12,55;UBERON:0002368,1.19e-11,60;UBERON:0003104,1.85e-11,61;UBERON:0009142,1.85e-11,61;UBERON:0002530,9.47e-11,65;UBERON:0000490,1.38e-10,66;UBERON:0009569,1.38e-10,66;UBERON:0005911,4.02e-10,69;UBERON:0000949,1.07e-09,72;UBERON:0005177,7.96e-09,79;UBERON:0001041,1.03e-08,80;UBERON:0002100,9.97e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,3.39985666853875,1.61910957491345,2.59910566979068,4.03224198387602,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.858105083486,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,5.56131981917928,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p1@ENSMUST00000119510 | |||
}} |
Latest revision as of 04:12, 6 August 2015
Short description: | p1@ENSMUST00000119510 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000119510_5end |
Coexpression cluster: | MCL_coexpression_mm9:196 |
Association with transcript: | -52bp_to_ENSMUST00000119510_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.39e-35 | 5 |
fibroblast | 5.53e-12 | 1 |
hepatic stellate cell | 5.53e-12 | 1 |
endodermal cell | 3.81e-09 | 20 |
epithelial cell | 2.18e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 1.11e-31 | 22 |
epithelial sac | 1.11e-31 | 22 |
digestive gland | 1.11e-31 | 22 |
epithelium of foregut-midgut junction | 1.11e-31 | 22 |
anatomical boundary | 1.11e-31 | 22 |
hepatobiliary system | 1.11e-31 | 22 |
foregut-midgut junction | 1.11e-31 | 22 |
hepatic diverticulum | 1.11e-31 | 22 |
liver primordium | 1.11e-31 | 22 |
septum transversum | 1.11e-31 | 22 |
liver bud | 1.11e-31 | 22 |
digestive tract diverticulum | 2.59e-30 | 23 |
sac | 2.59e-30 | 23 |
exocrine gland | 6.66e-28 | 25 |
exocrine system | 6.66e-28 | 25 |
trunk mesenchyme | 1.53e-15 | 45 |
epithelial tube | 7.01e-15 | 47 |
abdomen element | 2.84e-14 | 49 |
abdominal segment element | 2.84e-14 | 49 |
abdominal segment of trunk | 2.84e-14 | 49 |
abdomen | 2.84e-14 | 49 |
gut epithelium | 1.03e-12 | 55 |
endocrine gland | 1.19e-11 | 60 |
mesenchyme | 1.85e-11 | 61 |
entire embryonic mesenchyme | 1.85e-11 | 61 |
gland | 9.47e-11 | 65 |
unilaminar epithelium | 1.38e-10 | 66 |
subdivision of trunk | 1.38e-10 | 66 |
endo-epithelium | 4.02e-10 | 69 |
endocrine system | 1.07e-09 | 72 |
trunk region element | 7.96e-09 | 79 |
foregut | 1.03e-08 | 80 |
trunk | 9.97e-08 | 90 |