Personal tools

FFCP PHASE1:Mm9::chr5:135485704..135485715,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=68758|HGNC=|UniProt=|association_with_transcript=-127bp_to_ENSMUST00000148831_5end|description=CAGE_peak_7_at_Abhd11_5end|id=chr5:135485704..135485715,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,1.15e-09,8;CL:0000893,2.99e-09,6;CL:0002489,2.99e-09,6;CL:0000898,2.99e-09,6;CL:0000809,2.99e-09,6;CL:0000810,2.99e-09,6;CL:0000895,2.99e-09,6;CL:0000808,2.99e-09,6;CL:0000894,2.99e-09,6;CL:0000806,2.99e-09,6;CL:0000807,2.99e-09,6;CL:0000805,2.99e-09,6;CL:0002425,2.99e-09,6;CL:0002436,2.99e-09,6;CL:0002427,2.99e-09,6;CL:0002428,2.99e-09,6;CL:0002429,2.99e-09,6;CL:0002433,2.99e-09,6;CL:0002431,2.99e-09,6;CL:0002432,2.99e-09,6;CL:0000791,1.72e-08,9;CL:0000789,1.72e-08,9;CL:0002420,1.72e-08,9;CL:0002419,1.72e-08,9;CL:0000790,1.72e-08,9;CL:0000084,8.74e-07,11;CL:0000827,8.74e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.17e-07!52;UBERON:0005068!6.17e-07!52;UBERON:0006241!6.17e-07!52;UBERON:0007135!6.17e-07!52|ontology_enrichment_uberon_v019_2=|phase1_expression=1.12104192973356,1.74487703819681,1.36499771816861,0.90739263392049,1.50268718983904,0.671517087647559,0.700837921786577,2.06597317506522,2.67498572088167,1.87251621057595,0.68487187290202,1.27635454392538,2.73921167889929,2.27293046289393,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,0.274228867211478,0.42438965179803,0.850432901510698,0.0992909512008853,0.522399578277871,0.95995453676044,1.37645568640302,1.14846392823004,0.430761996159075,0.646413698057667,0.760093677825496,0.756090389279792,0.886922042621219,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,2.12891555560981,0.550640256485045,0.782391344348039,1.09012578190223,1.31811709640683,0.58328969722285,0.419959264876088,0,0.671130424230945,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,0.404632921719196,0,0.633831403506179,0.338844532069132,1.77858959222228,1.3498495759221,1.97773272513395,0,0,1.15265491596466,0.518448061542388,0.270011876663381,0.210324961351382,0.856952953211411,1.76694832761291,0.857435594504678,0,2.75765635983006,0,0.893811366596314,1.22885226604995,0.659431438650969,0.548925861614458,0,3.07101298901519,2.25105044012672,0.30559649555362,0.883885756421003,1.42371680799103,0.745597783301202,2.04460721999597,1.20914496170857,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0.70667914902068,0.985903938436763,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.22836775943812,0.517875767294343,0.742210695324124,0.346970653532272,0,0.230615497256059,0.60289056221049,0,0,0.494389935468748,0.722996784599558,0.884610551949874,0,0,0,0,0.292780797011547,0.83778682725382,0.255457055208591,0.359445373517761,0,0.381210681219194,0.599162557619291,0,0.125654352112864,1.73824320192276,0,0.62336413367868,0.648965052271031,0.101839363850316,0.124406970610093,0.505445516867349,0.631325567659422,0,0.459804208866946,0.180062129805349,0.452114453507145,0.136072998302656,0,0.187403449119458,0,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0.51469581422943,1.42081749697796,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,0.514523061896422,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.795825888164603,0.974820435595601,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0.482354319504834,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0,0.469380496577004,0.502518772325447,0.952174563544055,0.195133647857799,0,1.10732344824387,0.318909537314974,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.35163505977661,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0.885905678642318,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.857348140126369,0,0.356737635204141,0.987294123612726,0.913394847343798,0,0.42366414172764,0.220528398054962,0.65954501176592,0,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,1.11255181206306,0.341741761595705,0.206386867963223,0.555583582109135,0,0,0,1.01987057996313,0.559805809294632,0.829199842826543,0,0,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.259229946583586,1.86401793926078,2.25477175473676,0,0.330916980914195,0.194451188344048,0.774958940866387,0.168956125490778,0.58678619322877,0.651021924219751,0.734015410979976,0.241584120826006,1.72818003754719,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0.600977247599844,0,0.201932899896295,0.228620419965,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0.564751842617067,0,0,1.03111909406213,1.37016503954128,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,1.52087579934144,0.188626341386076,0.187283014939765,0.448176066834085,0.516919220600519,1.90517476513229,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.0941093804153306,0.592302255241736,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.57386499620653,0,0.927471342481686|short_description=p7@Abhd11}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:68758
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-127bp_to_ENSMUST00000148831_5end
|cluster_id=chr5:135485704..135485715,+
|description=CAGE_peak_7_at_Abhd11_5end
|id=chr5:135485704..135485715,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000624,1.15e-09,8;CL:0000893,2.99e-09,6;CL:0002489,2.99e-09,6;CL:0000898,2.99e-09,6;CL:0000809,2.99e-09,6;CL:0000810,2.99e-09,6;CL:0000895,2.99e-09,6;CL:0000808,2.99e-09,6;CL:0000894,2.99e-09,6;CL:0000806,2.99e-09,6;CL:0000807,2.99e-09,6;CL:0000805,2.99e-09,6;CL:0002425,2.99e-09,6;CL:0002436,2.99e-09,6;CL:0002427,2.99e-09,6;CL:0002428,2.99e-09,6;CL:0002429,2.99e-09,6;CL:0002433,2.99e-09,6;CL:0002431,2.99e-09,6;CL:0002432,2.99e-09,6;CL:0000791,1.72e-08,9;CL:0000789,1.72e-08,9;CL:0002420,1.72e-08,9;CL:0002419,1.72e-08,9;CL:0000790,1.72e-08,9;CL:0000084,8.74e-07,11;CL:0000827,8.74e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.17e-07!52;UBERON:0005068!6.17e-07!52;UBERON:0006241!6.17e-07!52;UBERON:0007135!6.17e-07!52
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.12104192973356,1.74487703819681,1.36499771816861,0.90739263392049,1.50268718983904,0.671517087647559,0.700837921786577,2.06597317506522,2.67498572088167,1.87251621057595,0.68487187290202,1.27635454392538,2.73921167889929,2.27293046289393,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,0.274228867211478,0.42438965179803,0.850432901510698,0.0992909512008853,0.522399578277871,0.95995453676044,1.37645568640302,1.14846392823004,0.430761996159075,0.646413698057667,0.760093677825496,0.756090389279792,0.886922042621219,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,2.12891555560981,0.550640256485045,0.782391344348039,1.09012578190223,1.31811709640683,0.58328969722285,0.419959264876088,0,0.671130424230945,0.725362142011344,0.336093799142464,0.771778308107841,0.286533439938757,0.515672092277442,0.404632921719196,0,0.633831403506179,0.338844532069132,1.77858959222228,1.3498495759221,1.97773272513395,0,0,1.15265491596466,0.518448061542388,0.270011876663381,0.210324961351382,0.856952953211411,1.76694832761291,0.857435594504678,0,2.75765635983006,0,0.893811366596314,1.22885226604995,0.659431438650969,0.548925861614458,0,3.07101298901519,2.25105044012672,0.30559649555362,0.883885756421003,1.42371680799103,0.745597783301202,2.04460721999597,1.20914496170857,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0,0.259786004602869,0.70667914902068,0.985903938436763,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.22836775943812,0.517875767294343,0.742210695324124,0.346970653532272,0,0.230615497256059,0.60289056221049,0,0,0.494389935468748,0.722996784599558,0.884610551949874,0,0,0,0,0.292780797011547,0.83778682725382,0.255457055208591,0.359445373517761,0,0.381210681219194,0.599162557619291,0,0.125654352112864,1.73824320192276,0,0.62336413367868,0.648965052271031,0.101839363850316,0.124406970610093,0.505445516867349,0.631325567659422,0,0.459804208866946,0.180062129805349,0.452114453507145,0.136072998302656,0,0.187403449119458,0,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0.51469581422943,1.42081749697796,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,0.514523061896422,0.660837565967596,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.795825888164603,0.974820435595601,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0.482354319504834,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0,0.469380496577004,0.502518772325447,0.952174563544055,0.195133647857799,0,1.10732344824387,0.318909537314974,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.35163505977661,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0.885905678642318,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.857348140126369,0,0.356737635204141,0.987294123612726,0.913394847343798,0,0.42366414172764,0.220528398054962,0.65954501176592,0,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,1.11255181206306,0.341741761595705,0.206386867963223,0.555583582109135,0,0,0,1.01987057996313,0.559805809294632,0.829199842826543,0,0,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.259229946583586,1.86401793926078,2.25477175473676,0,0.330916980914195,0.194451188344048,0.774958940866387,0.168956125490778,0.58678619322877,0.651021924219751,0.734015410979976,0.241584120826006,1.72818003754719,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0.600977247599844,0,0.201932899896295,0.228620419965,0.100826185136841,0.194915761479505,0.288635524920988,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0.564751842617067,0,0,1.03111909406213,1.37016503954128,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,1.52087579934144,0.188626341386076,0.187283014939765,0.448176066834085,0.516919220600519,1.90517476513229,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.726732083161643,0.0941093804153306,0.592302255241736,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0.57386499620653,0,0.927471342481686
|short_description=p7@Abhd11
}}

Revision as of 10:05, 6 August 2015

Short description:p7@Abhd11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Abhd11_5end
Coexpression cluster:NA
Association with transcript: -127bp_to_ENSMUST00000148831_5end
EntrezGene:68758
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Abhd11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell1.15e-098
thymocyte2.99e-096
double negative thymocyte2.99e-096
naive T cell2.99e-096
double-positive, alpha-beta thymocyte2.99e-096
CD4-positive, alpha-beta thymocyte2.99e-096
naive thymus-derived CD4-positive, alpha-beta T cell2.99e-096
DN4 thymocyte2.99e-096
DN1 thymic pro-T cell2.99e-096
DN2 thymocyte2.99e-096
DN3 thymocyte2.99e-096
immature single positive thymocyte2.99e-096
early T lineage precursor2.99e-096
mature CD4 single-positive thymocyte2.99e-096
resting double-positive thymocyte2.99e-096
double-positive blast2.99e-096
CD69-positive double-positive thymocyte2.99e-096
CD69-positive, CD4-positive single-positive thymocyte2.99e-096
CD4-positive, CD8-intermediate double-positive thymocyte2.99e-096
CD24-positive, CD4 single-positive thymocyte2.99e-096
mature alpha-beta T cell1.72e-089
alpha-beta T cell1.72e-089
immature T cell1.72e-089
mature T cell1.72e-089
immature alpha-beta T cell1.72e-089
T cell8.74e-0711
pro-T cell8.74e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:135485704..135485715,%2B&oldid=4007955"