FFCP PHASE1:Mm9::chrX:70922052..70922064,+: Difference between revisions
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{{FFCP|EntrezGene=102857|HGNC=|MCL_coexpression_id=12|UniProt=F7C668|association_with_transcript=-120bp_to_ENSMUST00000114464_5end|description=CAGE_peak_4_at_Slc6a8_5end|id=chrX:70922052..70922064,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000473,7.61e-15,7;CL:0000682,4.09e-10,3;CL:0000333,2.10e-09,10;CL:0000095,2.10e-09,10;CL:0000243,2.10e-09,10;CL:0000123,2.10e-09,10;CL:0000125,2.10e-09,10;CL:0000030,2.10e-09,10;CL:0000339,2.10e-09,10;CL:0000239,1.62e-08,6;CL:0000677,1.62e-08,6;CL:0000584,1.62e-08,6;CL:0002453,2.88e-08,8;CL:0000075,2.68e-07,7;CL:0002194,8.04e-07,4;CL:0000766,8.04e-07,4;CL:0000234,8.04e-07,4;CL:0000576,8.04e-07,4;CL:0000235,8.04e-07,4;CL:0000864,8.04e-07,4;CL:0002009,8.04e-07,4;CL:0000040,8.04e-07,4;CL:0000559,8.04e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.02e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.19e-16,15;UBERON:0001242,3.89e-11,13;UBERON:0001262,3.89e-11,13;UBERON:0004786,3.89e-11,13;UBERON:0000331,2.04e-10,3;UBERON:0002116,2.04e-10,3;UBERON:0001204,2.04e-10,3;UBERON:0001168,2.04e-10,3;UBERON:0004923,3.18e-09,24;UBERON:0000160,4.22e-08,31;UBERON:0002108,6.70e-08,4;UBERON:0001962,2.15e-07,2;UBERON:0001961,2.15e-07,2;UBERON:0001744,2.15e-07,2|phase1_expression=0.320297694209588,3.14077866875425,5.0049916332849,3.32710632437513,1.50268718983904,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,3.67054849707472,5.7423196411502,1.29228598847722,5.817723282519,6.08074942260396,4.03248207615889,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.183546752161682,0,0.436050312760893,1.09843091367236,1.1665793944457,1.25987779462826,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,2.96659908770092,0.7104801149461,1.19840044207362,1.15265491596466,0,0.270011876663381,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,0,1.0752457327937,0,0.274462930807229,0,0.279182999001381,0,0.61119299110724,0.294628585473668,0,0.186399445825301,2.12033341332915,0.453429360640713,0,0,0,0,0,0.448026887097336,0.280888840263504,1.1930122580464,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0.292780797011547,0,1.27728527604296,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0,0,0.210289948564127,0,0.991256348951394,0.793351699990633,0.426576501070468,0.232236671860439,0,0,0,0.380451252225118,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.58489226135736,0,1.51296634912286,1.1948476395262,0,0,0,0,0.581857461502877,0.0701358198903186,0.126473074248515,0.442830443938806,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0.321101179975584,0.35163505977661,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.503653849092235,0,0.563047426353546,0,0.214368379079066,1.50471631210609,0.564751842617067,0,0,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.280924522409647,0.256100609619477,0,0,0,0,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.382576664137687,0.441182838239031,0|short_description=p4@Slc6a8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102857 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F7C668 | |||
|association_with_transcript=-120bp_to_ENSMUST00000114464_5end | |||
|cluster_id=chrX:70922052..70922064,+ | |||
|description=CAGE_peak_4_at_Slc6a8_5end | |||
|id=chrX:70922052..70922064,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.61e-15,7;CL:0000682,4.09e-10,3;CL:0000333,2.10e-09,10;CL:0000095,2.10e-09,10;CL:0000243,2.10e-09,10;CL:0000123,2.10e-09,10;CL:0000125,2.10e-09,10;CL:0000030,2.10e-09,10;CL:0000339,2.10e-09,10;CL:0000239,1.62e-08,6;CL:0000677,1.62e-08,6;CL:0000584,1.62e-08,6;CL:0002453,2.88e-08,8;CL:0000075,2.68e-07,7;CL:0002194,8.04e-07,4;CL:0000766,8.04e-07,4;CL:0000234,8.04e-07,4;CL:0000576,8.04e-07,4;CL:0000235,8.04e-07,4;CL:0000864,8.04e-07,4;CL:0002009,8.04e-07,4;CL:0000040,8.04e-07,4;CL:0000559,8.04e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.02e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.19e-16,15;UBERON:0001242,3.89e-11,13;UBERON:0001262,3.89e-11,13;UBERON:0004786,3.89e-11,13;UBERON:0000331,2.04e-10,3;UBERON:0002116,2.04e-10,3;UBERON:0001204,2.04e-10,3;UBERON:0001168,2.04e-10,3;UBERON:0004923,3.18e-09,24;UBERON:0000160,4.22e-08,31;UBERON:0002108,6.70e-08,4;UBERON:0001962,2.15e-07,2;UBERON:0001961,2.15e-07,2;UBERON:0001744,2.15e-07,2 | |||
|phase1_expression=0.320297694209588,3.14077866875425,5.0049916332849,3.32710632437513,1.50268718983904,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35984087866154,3.67054849707472,5.7423196411502,1.29228598847722,5.817723282519,6.08074942260396,4.03248207615889,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.183546752161682,0,0.436050312760893,1.09843091367236,1.1665793944457,1.25987779462826,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,2.96659908770092,0.7104801149461,1.19840044207362,1.15265491596466,0,0.270011876663381,0,0.856952953211411,0.662605622854841,0.122490799214954,0.0958454710182364,0,2.20231761998777,0,1.0752457327937,0,0.274462930807229,0,0.279182999001381,0,0.61119299110724,0.294628585473668,0,0.186399445825301,2.12033341332915,0.453429360640713,0,0,0,0,0,0.448026887097336,0.280888840263504,1.1930122580464,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0.292780797011547,0,1.27728527604296,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0,0,0.210289948564127,0,0.991256348951394,0.793351699990633,0.426576501070468,0.232236671860439,0,0,0,0.380451252225118,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.58489226135736,0,1.51296634912286,1.1948476395262,0,0,0,0,0.581857461502877,0.0701358198903186,0.126473074248515,0.442830443938806,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0.321101179975584,0.35163505977661,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.503653849092235,0,0.563047426353546,0,0.214368379079066,1.50471631210609,0.564751842617067,0,0,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.280924522409647,0.256100609619477,0,0,0,0,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.382576664137687,0.441182838239031,0 | |||
|short_description=p4@Slc6a8 | |||
}} |
Revision as of 10:13, 6 August 2015
Short description: | p4@Slc6a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc6a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -120bp_to_ENSMUST00000114464_5end |
EntrezGene: | 102857 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.61e-15 | 7 |
M cell of gut | 4.09e-10 | 3 |
migratory neural crest cell | 2.10e-09 | 10 |
neuron associated cell | 2.10e-09 | 10 |
glial cell (sensu Vertebrata) | 2.10e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.10e-09 | 10 |
glial cell | 2.10e-09 | 10 |
glioblast | 2.10e-09 | 10 |
glioblast (sensu Vertebrata) | 2.10e-09 | 10 |
brush border epithelial cell | 1.62e-08 | 6 |
gut absorptive cell | 1.62e-08 | 6 |
enterocyte | 1.62e-08 | 6 |
oligodendrocyte precursor cell | 2.88e-08 | 8 |
columnar/cuboidal epithelial cell | 2.68e-07 | 7 |
monopoietic cell | 8.04e-07 | 4 |
myeloid leukocyte | 8.04e-07 | 4 |
phagocyte | 8.04e-07 | 4 |
monocyte | 8.04e-07 | 4 |
macrophage | 8.04e-07 | 4 |
tissue-resident macrophage | 8.04e-07 | 4 |
macrophage dendritic cell progenitor | 8.04e-07 | 4 |
monoblast | 8.04e-07 | 4 |
promonocyte | 8.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.19e-16 | 15 |
intestinal mucosa | 3.89e-11 | 13 |
wall of intestine | 3.89e-11 | 13 |
gastrointestinal system mucosa | 3.89e-11 | 13 |
ileal mucosa | 2.04e-10 | 3 |
ileum | 2.04e-10 | 3 |
mucosa of small intestine | 2.04e-10 | 3 |
wall of small intestine | 2.04e-10 | 3 |
organ component layer | 3.18e-09 | 24 |
intestine | 4.22e-08 | 31 |
small intestine | 6.70e-08 | 4 |
gut-associated lymphoid tissue | 2.15e-07 | 2 |
mucosa-associated lymphoid tissue | 2.15e-07 | 2 |
lymphoid tissue | 2.15e-07 | 2 |