FFCP PHASE2:Hg19::chr4:149365827..149365870,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4306 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7979 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7979 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B0ZBF6 | ||
|association_with_transcript=0bp_to_ENST00000344721_5end | |association_with_transcript=0bp_to_ENST00000344721_5end | ||
|cluster_id=chr4:149365827..149365870,- | |cluster_id=chr4:149365827..149365870,- |
Latest revision as of 00:51, 16 September 2015
Short description: | p5@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR3C2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_ENST00000344721_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@NR3C2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.54e-25 | 18 |
alpha-beta T cell | 5.54e-25 | 18 |
immature T cell | 5.54e-25 | 18 |
mature T cell | 5.54e-25 | 18 |
immature alpha-beta T cell | 5.54e-25 | 18 |
lymphoid lineage restricted progenitor cell | 1.83e-23 | 52 |
lymphocyte | 7.60e-23 | 53 |
common lymphoid progenitor | 7.60e-23 | 53 |
CD8-positive, alpha-beta T cell | 1.64e-19 | 11 |
T cell | 1.34e-16 | 25 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.21e-19 | 22 |
neocortex | 1.20e-16 | 20 |
cerebral cortex | 1.44e-16 | 25 |
pallium | 1.44e-16 | 25 |
cerebral hemisphere | 1.49e-15 | 32 |
adult organism | 1.64e-14 | 114 |
telencephalon | 2.39e-14 | 34 |
regional part of telencephalon | 1.06e-13 | 32 |
brain grey matter | 1.26e-12 | 34 |
gray matter | 1.26e-12 | 34 |
Showing 1 to 10 of 29 entries