FFCP PHASE2:Hg19::chr2:238592039..238592054,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6702 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 04:35, 16 September 2015
Short description: | p4@LRRFIP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRFIP1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000489295, ENST00000498053_5end |
EntrezGene: | LRRFIP1 |
HGNC: | 6702 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LRRFIP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 4.05e-07 | 253 |
amnion mesenchymal stem cell | 8.91e-07 | 5 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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larynx | 5.21e-31 | 9 |
respiratory tract | 2.02e-29 | 54 |
respiratory primordium | 1.01e-27 | 38 |
endoderm of foregut | 1.01e-27 | 38 |
respiratory system | 1.16e-27 | 74 |
subdivision of digestive tract | 1.04e-24 | 118 |
foregut | 1.33e-24 | 87 |
upper respiratory tract | 7.33e-24 | 19 |
digestive system | 1.05e-22 | 145 |
digestive tract | 1.05e-22 | 145 |
Showing 1 to 10 of 31 entries
Ontology term | p-value | n |
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carcinoma | 2.65e-20 | 106 |
squamous cell carcinoma | 1.35e-13 | 14 |
cell type cancer | 4.72e-13 | 143 |
thoracic cancer | 1.36e-07 | 4 |
breast cancer | 1.36e-07 | 4 |
Showing 1 to 5 of 5 entries