FFCP PHASE2:Hg19::chr19:1652555..1652568,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6929 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11633 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11633 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P15923 | ||
|association_with_transcript=-227bp_to_NM_003200_5end | |association_with_transcript=-227bp_to_NM_003200_5end | ||
|cluster_id=chr19:1652555..1652568,- | |cluster_id=chr19:1652555..1652568,- | ||
Latest revision as of 09:59, 16 September 2015
| Short description: | p2@TCF3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_TCF3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -227bp_to_NM_003200_5end |
| EntrezGene: | TCF3 |
| HGNC: | 11633 |
| UniProt: | P15923 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@TCF3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 5.35e-16 | 250 |
| endothelial cell | 3.85e-12 | 36 |
| lining cell | 4.85e-12 | 58 |
| barrier cell | 4.85e-12 | 58 |
| mesodermal cell | 3.20e-11 | 121 |
| blood vessel endothelial cell | 1.53e-10 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.53e-10 | 18 |
| endothelial cell of vascular tree | 1.95e-10 | 24 |
| meso-epithelial cell | 2.48e-10 | 45 |
| epithelial cell | 9.11e-10 | 253 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| blood vessel endothelium | 1.53e-10 | 18 |
| endothelium | 1.53e-10 | 18 |
| cardiovascular system endothelium | 1.53e-10 | 18 |
| cardiovascular system | 6.22e-10 | 109 |
| simple squamous epithelium | 1.72e-09 | 22 |
| vasculature | 2.68e-09 | 78 |
| vascular system | 2.68e-09 | 78 |
| circulatory system | 4.75e-09 | 112 |
| vessel | 1.46e-08 | 68 |
| squamous epithelium | 2.33e-08 | 25 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 2.50e-09 | 51 |
| immune system cancer | 2.50e-09 | 51 |
| cancer | 7.34e-08 | 235 |
| disease of cellular proliferation | 4.65e-07 | 239 |
Showing 1 to 4 of 4 entries
