FFCP PHASE2:Hg19::chr9:14868978..14869003,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:158326 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:23399 |TSSclassifier=stro...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=23399 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 18:40, 16 September 2015
| Short description: | p7@FREM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_FREM1_5end |
| Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
| Association with transcript: | -2bp_to_BC172226_5end |
| EntrezGene: | FREM1 |
| HGNC: | 23399 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@FREM1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 4.61e-53 | 12 |
| endodermal cell | 1.24e-11 | 58 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 7.04e-34 | 19 |
| digestive gland | 7.04e-34 | 19 |
| liver bud | 7.04e-34 | 19 |
| hepatic diverticulum | 2.19e-29 | 22 |
| liver primordium | 2.19e-29 | 22 |
| digestive tract diverticulum | 3.80e-28 | 23 |
| epithelial sac | 5.75e-26 | 25 |
| epithelium of foregut-midgut junction | 5.75e-26 | 25 |
| anatomical boundary | 5.75e-26 | 25 |
| hepatobiliary system | 5.75e-26 | 25 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| melanoma | 6.96e-21 | 2 |
| disease of anatomical entity | 6.08e-17 | 39 |
| cell type cancer | 1.55e-07 | 143 |
Showing 1 to 3 of 3 entries
