FFCP PHASE2:Hg19::chr1:168195229..168195294,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:375035,entrezgene:9095 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=H...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=375035,9095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25140,11596 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O95562,Q5TIH2 | ||
|association_with_transcript=0bp_to_ENST00000271375,ENST00000367825,NM_199344,uc001gfi.3,uc001gfj.3_5end | |association_with_transcript=0bp_to_ENST00000271375,ENST00000367825,NM_199344,uc001gfi.3,uc001gfj.3_5end | ||
|cluster_id=chr1:168195229..168195294,+ | |cluster_id=chr1:168195229..168195294,+ |
Latest revision as of 12:14, 18 September 2015
Short description: | p1@SFT2D2, p1@TBX19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFT2D2_5end, CAGE_peak_1_at_TBX19_5end |
Coexpression cluster: | C992_Dendritic_melanoma_immature_CD19_Basophils_CD14_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000271375, ENST00000367825, NM_199344, uc001gfi.3, uc001gfj.3_5end |
EntrezGene: | 375035,9095 |
HGNC: | 11596&submit=Submit 25140, 11596 |
UniProt: | O95562Q5TIH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SFT2D2p1@TBX19 |
---|
0
100
200
300
400
500
600
700
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.72e-41 | 136 |
nongranular leukocyte | 2.10e-36 | 115 |
hematopoietic stem cell | 8.67e-36 | 168 |
hematopoietic cell | 3.23e-35 | 177 |
hematopoietic lineage restricted progenitor cell | 7.24e-35 | 120 |
hematopoietic oligopotent progenitor cell | 9.61e-33 | 161 |
hematopoietic multipotent progenitor cell | 9.61e-33 | 161 |
macrophage dendritic cell progenitor | 1.27e-25 | 61 |
myeloid leukocyte | 4.83e-25 | 72 |
granulocyte monocyte progenitor cell | 1.33e-24 | 67 |
Showing 1 to 10 of 39 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.54e-27 | 98 |
blood island | 7.54e-27 | 98 |
hemolymphoid system | 7.89e-26 | 108 |
immune system | 2.45e-21 | 93 |
bone marrow | 1.05e-20 | 76 |
connective tissue | 7.64e-20 | 371 |
bone element | 3.95e-18 | 82 |
skeletal element | 2.26e-17 | 90 |
skeletal system | 2.46e-15 | 100 |
Showing 1 to 9 of 9 entries