FFCP PHASE2:Hg19::chr22:31742303..31742350,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23598 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13071 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13071 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9HBE1 | ||
|association_with_transcript=-54bp_to_NM_014323,NM_032050,NM_032051,NM_032052,uc003akp.2,uc003akq.2,uc003akr.2,uc003aks.2_5end | |association_with_transcript=-54bp_to_NM_014323,NM_032050,NM_032051,NM_032052,uc003akp.2,uc003akq.2,uc003akr.2,uc003aks.2_5end | ||
|cluster_id=chr22:31742303..31742350,- | |cluster_id=chr22:31742303..31742350,- |
Latest revision as of 20:34, 19 September 2015
Short description: | p1@PATZ1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PATZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_NM_014323, NM_032050, NM_032051, NM_032052, uc003akp.2, uc003akq.2, uc003akr.2, uc003aks.2_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | Q9HBE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PATZ1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lymphoid lineage restricted progenitor cell | 3.78e-09 | 52 |
lymphocyte | 1.18e-08 | 53 |
common lymphoid progenitor | 1.18e-08 | 53 |
mature alpha-beta T cell | 9.76e-08 | 18 |
alpha-beta T cell | 9.76e-08 | 18 |
immature T cell | 9.76e-08 | 18 |
mature T cell | 9.76e-08 | 18 |
immature alpha-beta T cell | 9.76e-08 | 18 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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neurectoderm | 1.13e-08 | 86 |
adult organism | 4.50e-08 | 114 |
neural plate | 1.63e-07 | 82 |
presumptive neural plate | 1.63e-07 | 82 |
Showing 1 to 4 of 4 entries