FF:10821-111C2: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{f5samples
|id=FF:10821-111C2
|name=B lymphoblastoid cell line: GM12878 ENCODE, biol_rep1
|sample_id=10821
|rna_tube_id=111C2
|rna_box=111
|rna_position=C2
|sample_cel...") |
No edit summary |
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| Line 20: | Line 20: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|rna_rin= | |rna_rin= | ||
|rna_od260/230=2. | |rna_od260/230=2.15 | ||
|rna_od260/280=2. | |rna_od260/280=2.09 | ||
|sample_cell_type=b cell | |sample_cell_type=b cell | ||
|sample_cell_line=GM12878 | |sample_cell_line=GM12878 | ||
|sample_collaboration=Carrie Davis (Cold spring Harbor Laboratories) | |sample_collaboration=Carrie Davis (Cold spring Harbor Laboratories) | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_disease= | |sample_disease= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | ||
|rna_weight_ug=25. | |rna_weight_ug=25.8955 | ||
|rna_concentration=0.51791 | |rna_concentration=0.51791 | ||
|sample_note= | |sample_note= | ||
| Line 40: | Line 40: | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|sample_description= | |sample_description= | ||
|fonse_cell_line=FF:0101035,FF:0101522 | |fonse_cell_line=FF:0101035,FF:0101522 | ||
|fonse_cell_line_closure=FF:0101035,FF:0101522 | |fonse_cell_line_closure=FF:0101035,FF:0101522 | ||
| Line 67: | Line 66: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|top_motifs= | |||
}} | }} | ||
Revision as of 17:11, 27 February 2012
| Name: | B lymphoblastoid cell line: GM12878 ENCODE, biol_rep1 |
|---|---|
| Species: | |
| Library ID: | {{{library_id}}} |
| Sample type: | {{{sample_category}}} |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
{{{is_a}}}
part_of relathionship
{{{part_of}}}
has_quality relathionship
{{{has_quality}}}
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000034 (stem cell)
0000037 (hematopoietic stem cell)
0000048 (multi fate stem cell)
0000051 (common lymphoid progenitor)
0000134 (mesenchymal cell)
0000219 (motile cell)
0000255 (eukaryotic cell)
0000542 (lymphocyte)
0000548 (animal cell)
0000566 (angioblastic mesenchymal cell)
0000723 (somatic stem cell)
0000738 (leukocyte)
0000826 (pro-B cell)
0000837 (hematopoietic multipotent progenitor cell)
0000838 (lymphoid lineage restricted progenitor cell)
0000945 (lymphocyte of B lineage)
0000988 (hematopoietic cell)
0002031 (hematopoietic lineage restricted progenitor cell)
0002032 (hematopoietic oligopotent progenitor cell)
0002087 (nongranular leukocyte)
0002320 (connective tissue cell)
0002371 (somatic cell)
UBERON: Anatomy
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000479 (tissue)
0001062 (anatomical entity)
0002384 (connective tissue)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
