Personal tools

FFCP PHASE2:Hg19::chr5:131826457..131826514,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3659 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6116 |TSSclass...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:3659
|EntrezGene=3659
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:6116
|HGNC=6116
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P10914,uniprot:C9J9C5,uniprot:Q6FHN8
|UniProt=P10914,C9J9C5,Q6FHN8
|association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end
|association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end
|cluster_id=chr5:131826457..131826514,-
|cluster_id=chr5:131826457..131826514,-

Latest revision as of 05:21, 20 September 2015

Short description:p1@IRF1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_IRF1_5end
Coexpression cluster:C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast
Association with transcript: 0bp_to_ENST00000245414, ENST00000437654, ENST00000459982, ENST00000463784, NM_002198, uc003kxa.2, uc003kxd.2_5end
EntrezGene:IRF1
HGNC: 6116
UniProt: P10914C9J9C5Q6FHN8
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1000
2000
3000
4000
5000




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data