FFCP PHASE2:Hg19::chr5:131826457..131826514,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3659 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6116 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6116 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P10914,C9J9C5,Q6FHN8 | ||
|association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end | |association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end | ||
|cluster_id=chr5:131826457..131826514,- | |cluster_id=chr5:131826457..131826514,- |
Latest revision as of 05:21, 20 September 2015
Short description: | p1@IRF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRF1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000245414, ENST00000437654, ENST00000459982, ENST00000463784, NM_002198, uc003kxa.2, uc003kxd.2_5end |
EntrezGene: | IRF1 |
HGNC: | 6116 |
UniProt: | P10914C9J9C5Q6FHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@IRF1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 4.20e-49 | 136 |
hematopoietic cell | 4.21e-41 | 177 |
hematopoietic lineage restricted progenitor cell | 8.83e-41 | 120 |
hematopoietic stem cell | 8.37e-40 | 168 |
nongranular leukocyte | 3.23e-39 | 115 |
hematopoietic oligopotent progenitor cell | 1.41e-36 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-36 | 161 |
myeloid leukocyte | 1.07e-26 | 72 |
classical monocyte | 2.56e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.56e-24 | 42 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
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hemolymphoid system | 2.91e-31 | 108 |
hematopoietic system | 3.25e-29 | 98 |
blood island | 3.25e-29 | 98 |
immune system | 7.33e-24 | 93 |
bone marrow | 6.76e-20 | 76 |
bone element | 1.78e-16 | 82 |
connective tissue | 1.87e-14 | 371 |
skeletal element | 8.99e-14 | 90 |
lateral plate mesoderm | 1.85e-11 | 203 |
skeletal system | 3.10e-11 | 100 |
Showing 1 to 10 of 13 entries