FFCP PHASE2:Mm9::chr17:46300102..46300132,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:56055 |HGNC= |MCL_coexpression_id=1223 |TSSclassifier=NA |UniProt= |association_with_transcript=-42bp_to_ENSMUST000...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=56055 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1223 | |MCL_coexpression_id=1223 | ||
Latest revision as of 13:25, 26 September 2015
| Short description: | p6@Gtpbp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Gtpbp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1223 |
| Association with transcript: | -42bp_to_ENSMUST00000169955_5end |
| EntrezGene: | Gtpbp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@Gtpbp2 |
|---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 1.53e-25 | 9 |
| alpha-beta T cell | 1.53e-25 | 9 |
| immature T cell | 1.53e-25 | 9 |
| mature T cell | 1.53e-25 | 9 |
| immature alpha-beta T cell | 1.53e-25 | 9 |
| CD4-positive, alpha-beta T cell | 3.54e-22 | 8 |
| T cell | 1.08e-20 | 11 |
| pro-T cell | 1.08e-20 | 11 |
| lymphoid lineage restricted progenitor cell | 7.14e-19 | 12 |
| lymphocyte | 2.48e-17 | 13 |
Showing 1 to 10 of 40 entries
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 5.84e-11 | 15 |
| intestinal mucosa | 1.79e-09 | 13 |
| wall of intestine | 1.79e-09 | 13 |
| gastrointestinal system mucosa | 1.79e-09 | 13 |
| connective tissue | 2.89e-09 | 46 |
Showing 1 to 5 of 5 entries
