FFCP PHASE2:Mm9::chr2:105515635..105515661,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:18508 |HGNC= |MCL_coexpression_id=2320 |TSSclassifier=NA |UniProt=uniprot:A2A410,uniprot:P63015 |association_with_t...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=18508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2320 | |MCL_coexpression_id=2320 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=A2A410,P63015 | ||
|association_with_transcript=-8bp_to_NM_001244200_5end | |association_with_transcript=-8bp_to_NM_001244200_5end | ||
|cluster_id=chr2:105515635..105515661,+ | |cluster_id=chr2:105515635..105515661,+ | ||
Latest revision as of 22:23, 1 October 2015
| Short description: | p5@Pax6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Pax6_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2320 |
| Association with transcript: | -8bp_to_NM_001244200_5end |
| EntrezGene: | Pax6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@Pax6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.97e-18 | 23 |
| neuroblast (sensu Vertebrata) | 1.97e-18 | 23 |
| neuron of cerebral cortex | 4.94e-12 | 6 |
| neuron | 1.69e-11 | 33 |
| neuronal stem cell | 1.69e-11 | 33 |
| neuroblast | 1.69e-11 | 33 |
| electrically signaling cell | 1.69e-11 | 33 |
| neural cell | 2.79e-10 | 43 |
| ectodermal cell | 6.15e-10 | 44 |
| neurectodermal cell | 6.15e-10 | 44 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 3.37e-37 | 64 |
| neural plate | 3.37e-37 | 64 |
| presumptive neural plate | 3.37e-37 | 64 |
| pre-chordal neural plate | 2.09e-33 | 49 |
| ecto-epithelium | 2.37e-31 | 73 |
| ectoderm-derived structure | 1.96e-27 | 95 |
| ectoderm | 1.96e-27 | 95 |
| presumptive ectoderm | 1.96e-27 | 95 |
| regional part of nervous system | 1.86e-25 | 54 |
| neural tube | 5.11e-25 | 52 |
Showing 1 to 10 of 53 entries
