FFCP PHASE2:Hg19::chr12:40618463..40618492,+
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| Short description: | p4@LRRK2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_LRRK2_5end |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | -320bp_to_ENST00000343742, NM_198578, uc001rmg.3_5end |
| EntrezGene: | LRRK2 |
| HGNC: | 18618 |
| UniProt: | E9PC85Q17RV3Q5S007 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p4@LRRK2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.58e-46 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.58e-46 | 42 |
| defensive cell | 1.64e-39 | 48 |
| phagocyte | 1.64e-39 | 48 |
| myeloid leukocyte | 3.94e-35 | 72 |
| monopoietic cell | 3.20e-34 | 59 |
| monocyte | 3.20e-34 | 59 |
| monoblast | 3.20e-34 | 59 |
| promonocyte | 3.20e-34 | 59 |
| macrophage dendritic cell progenitor | 8.54e-33 | 61 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.23e-34 | 98 |
| blood island | 3.23e-34 | 98 |
| hemolymphoid system | 6.61e-30 | 108 |
| bone marrow | 3.98e-26 | 76 |
| neocortex | 5.16e-24 | 20 |
| bone element | 1.62e-23 | 82 |
| cerebral hemisphere | 2.39e-22 | 32 |
| regional part of cerebral cortex | 1.53e-21 | 22 |
| immune system | 5.44e-21 | 93 |
| telencephalon | 9.49e-21 | 34 |
Showing 1 to 10 of 55 entries
