FFCP PHASE1:Hg19::chr15:32976758..32976767,+
From FANTOM5_SSTAR
Short description: | p9@SCG5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SCG5_5end |
Coexpression cluster: | C3477_Smooth_Aortic_Mesothelial_cholangiocellular_glioma_pagetoid_mesothelioma |
Association with transcript: | 117bp_to_ENST00000475752_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@SCG5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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aortic smooth muscle cell | 1.73e-36 | 10 |
vascular associated smooth muscle cell | 5.29e-14 | 32 |
smooth muscle cell | 3.88e-10 | 43 |
smooth muscle myoblast | 3.88e-10 | 43 |
muscle cell | 1.10e-07 | 55 |
muscle precursor cell | 3.14e-07 | 58 |
myoblast | 3.14e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.14e-07 | 58 |
electrically responsive cell | 8.06e-07 | 61 |
electrically active cell | 8.06e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.73e-36 | 10 |
arterial system smooth muscle | 1.73e-36 | 10 |
artery smooth muscle tissue | 1.73e-36 | 10 |
aorta smooth muscle tissue | 1.73e-36 | 10 |
smooth muscle tissue | 4.36e-24 | 15 |
aorta | 4.63e-22 | 21 |
aortic system | 4.63e-22 | 21 |
systemic artery | 1.21e-13 | 33 |
systemic arterial system | 1.21e-13 | 33 |
artery | 3.71e-13 | 42 |
Ontology term | p-value | n |
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ovarian cancer | 4.57e-13 | 14 |
spindle cell sarcoma | 2.06e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.