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MCL coexpression mm9:717

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Phase1 CAGE Peaks

 Short description
Mm9::chr11:98216636..98216644,+p@chr11:98216636..98216644
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Mm9::chr11:98216649..98216660,+p@chr11:98216649..98216660
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Mm9::chr11:98216663..98216676,+p@chr11:98216663..98216676
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Mm9::chr12:115065398..115065415,-p1@ENSMUST00000103457
Mm9::chr12:116610671..116610699,-p@chr12:116610671..116610699
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Mm9::chr19:21539679..21539681,-p@chr19:21539679..21539681
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Mm9::chr2:109740125..109740129,+p@chr2:109740125..109740129
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Mm9::chr6:78416298..78416310,-p@chr6:78416298..78416310
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Mm9::chr6:86715419..86715421,-p@chr6:86715419..86715421
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Mm9::chr7:52930395..52930401,+p@chr7:52930395..52930401
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Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


GO IDGO nameFDR corrected p-value
GO:0048521negative regulation of behavior0.00288529139880586
GO:0007621negative regulation of female receptivity0.00288529139880586
GO:0045924regulation of female receptivity0.00288529139880586
GO:0050795regulation of behavior0.00288529139880586
GO:0060181female receptivity0.00288529139880586
GO:0060180female mating behavior0.00288529139880586
GO:0004865type 1 serine/threonine specific protein phosphatase inhibitor activity0.0049459428233834
GO:0008599protein phosphatase type 1 regulator activity0.00540947675823292
GO:0033057reproductive behavior in a multicellular organism0.00673142443374804
GO:0007617mating behavior0.00778879287196149
GO:0007618mating0.0100952001073442
GO:0019098reproductive behavior0.0100952001073442
GO:0004864protein phosphatase inhibitor activity0.0106492977328508
GO:0019212phosphatase inhibitor activity0.0117417869620879
GO:0051705behavioral interaction between organisms0.0126883264074621
GO:0019888protein phosphatase regulator activity0.0172975207279368
GO:0019208phosphatase regulator activity0.0178048067250189
GO:0007269neurotransmitter secretion0.023657311898322
GO:0019717synaptosome0.023657311898322
GO:0045055regulated secretory pathway0.0266697990915955
GO:0005923tight junction0.0266697990915955
GO:0048609reproductive process in a multicellular organism0.0266697990915955
GO:0032504multicellular organism reproduction0.0266697990915955
GO:0006887exocytosis0.0277553794968213
GO:0003001generation of a signal involved in cell-cell signaling0.0277553794968213
GO:0043296apical junction complex0.0277553794968213
GO:0001505regulation of neurotransmitter levels0.0277553794968213
GO:0016327apicolateral plasma membrane0.0277553794968213
GO:0045211postsynaptic membrane0.0324387816027939
GO:0044456synapse part0.0347982125106223
GO:0005911intercellular junction0.0417134481758142
GO:0045045secretory pathway0.0471124669310346
GO:0007268synaptic transmission0.0492540285546446
GO:0032940secretion by cell0.0492540285546446
GO:0022414reproductive process0.0492540285546446
GO:0004857enzyme inhibitor activity0.0492540285546446



Relative expression of the co-expression cluster over median <br>Analyst:





Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>



TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs




JASPAR motifs


Motifs-log10(p-value)

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