FFCP PHASE1:Mm9::chr14:31166760..31166789,-
From FANTOM5_SSTAR
Short description: | p3@Cacna1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cacna1d_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | -88bp_to_ENSMUST00000057695, ENSMUST00000112249, NM_001083616, uc007suu.1, uc007suv.1, uc007suw.1_5end |
EntrezGene: | Cacna1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@Cacna1d |
---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 1.73e-14 | 47 |
future brain | 1.73e-14 | 47 |
neural tube | 5.05e-14 | 52 |
neural rod | 5.05e-14 | 52 |
future spinal cord | 5.05e-14 | 52 |
neural keel | 5.05e-14 | 52 |
regional part of brain | 1.33e-13 | 46 |
pre-chordal neural plate | 2.09e-13 | 49 |
anterior neural tube | 3.43e-13 | 40 |
neurectoderm | 3.51e-13 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.